RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 KPNA7A9QM74 516 aa23.25■■□□□ 1.31
MCF2L-201ENST00000261963 UGT1A9O60656 530 aa23.25■■□□□ 1.31
MCF2L-201ENST00000261963 C6orf163Q5TEZ5 329 aa23.25■■□□□ 1.31
MCF2L-201ENST00000261963 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.25■■□□□ 1.31
MCF2L-201ENST00000261963 SLC2A14Q8TDB8 520 aa23.25■■□□□ 1.31
MCF2L-201ENST00000261963 SIGLEC10Q96LC7 697 aa23.25■■□□□ 1.31
MCF2L-201ENST00000261963 QKIQ96PU8 341 aaKnown RBP eCLIP23.25■■□□□ 1.31
MCF2L-201ENST00000261963 RNF39Q9H2S5 420 aa23.25■■□□□ 1.31
MCF2L-201ENST00000261963 UGT1A7Q9HAW7 530 aa23.25■■□□□ 1.31
MCF2L-201ENST00000261963 UGT1A10Q9HAW8 530 aa23.25■■□□□ 1.31
MCF2L-201ENST00000261963 UGT1A8Q9HAW9 530 aa23.25■■□□□ 1.31
MCF2L-201ENST00000261963 ZNF180Q9UJW8 692 aa23.25■■□□□ 1.31
MCF2L-201ENST00000261963 USP3Q9Y6I4 520 aa23.25■■□□□ 1.31
MCF2L-201ENST00000261963 SMIM35A0A1B0GVV1 85 aa23.25■■□□□ 1.31
MCF2L-201ENST00000261963 TRDMT1O14717 391 aaKnown RBP23.25■■□□□ 1.31
MCF2L-201ENST00000261963 DYNC1LI2O43237 492 aaPredicted RBP23.25■■□□□ 1.31
MCF2L-201ENST00000261963 F2P00734 622 aa23.25■■□□□ 1.31
MCF2L-201ENST00000261963 CYP2C9P11712 490 aa23.25■■□□□ 1.31
MCF2L-201ENST00000261963 AP2B1P63010 937 aa23.25■■□□□ 1.31
MCF2L-201ENST00000261963 CDC42EP1Q00587 391 aa23.25■■□□□ 1.31
MCF2L-201ENST00000261963 SOX4Q06945 474 aaPredicted RBP23.25■■□□□ 1.31
MCF2L-201ENST00000261963 NET1Q7Z628 596 aaPredicted RBP23.25■■□□□ 1.31
MCF2L-201ENST00000261963 MPP5Q8N3R9 675 aa23.25■■□□□ 1.31
MCF2L-201ENST00000261963 NME8Q8N427 588 aa23.25■■□□□ 1.31
MCF2L-201ENST00000261963 LRRC39Q96DD0 335 aa23.25■■□□□ 1.31
MCF2L-201ENST00000261963 KCNK13Q9HB14 408 aa23.25■■□□□ 1.31
MCF2L-201ENST00000261963 GOLGA2P5Q9HBQ8 144 aa23.25■■□□□ 1.31
MCF2L-201ENST00000261963 GDAP2Q9NXN4 497 aa23.25■■□□□ 1.31
MCF2L-201ENST00000261963 DTLQ9NZJ0 730 aa23.25■■□□□ 1.31
MCF2L-201ENST00000261963 NRCAMQ92823 1304 aa23.25■■□□□ 1.31
MCF2L-201ENST00000261963 APOEP02649 317 aa23.24■■□□□ 1.31
MCF2L-201ENST00000261963 TKTP29401 623 aaKnown RBP23.24■■□□□ 1.31
MCF2L-201ENST00000261963 NR2C2P49116 596 aa23.24■■□□□ 1.31
MCF2L-201ENST00000261963 CFAP157Q5JU67 520 aa23.24■■□□□ 1.31
MCF2L-201ENST00000261963 NCBP2-AS2Q69YL0 99 aa23.24■■□□□ 1.31
MCF2L-201ENST00000261963 LIMS2Q7Z4I7 341 aa23.24■■□□□ 1.31
MCF2L-201ENST00000261963 PYROXD2Q8N2H3 581 aa23.24■■□□□ 1.31
MCF2L-201ENST00000261963 TTC17Q96AE7 1141 aa23.24■■□□□ 1.31
MCF2L-201ENST00000261963 HIC2Q96JB3 615 aa23.24■■□□□ 1.31
MCF2L-201ENST00000261963 DNAJB4Q9UDY4 337 aa23.24■■□□□ 1.31
MCF2L-201ENST00000261963 NR2E3Q9Y5X4 410 aa23.24■■□□□ 1.31
MCF2L-201ENST00000261963 DCAF8L1A6NGE4 600 aa23.24■■□□□ 1.31
MCF2L-201ENST00000261963 CIB2O75838 187 aa23.24■■□□□ 1.31
MCF2L-201ENST00000261963 ZFXP17010 805 aaPredicted RBP23.24■■□□□ 1.31
MCF2L-201ENST00000261963 TPSB2P20231 275 aa23.24■■□□□ 1.31
MCF2L-201ENST00000261963 GRIA1P42261 906 aa23.24■■□□□ 1.31
MCF2L-201ENST00000261963 GTF2A2P52657 109 aa23.24■■□□□ 1.31
MCF2L-201ENST00000261963 PRKD1Q15139 912 aaPredicted RBP23.24■■□□□ 1.31
MCF2L-201ENST00000261963 TPSAB1Q15661 275 aa23.24■■□□□ 1.31
MCF2L-201ENST00000261963 C4orf22Q6V702 233 aa23.24■■□□□ 1.31
MCF2L-201ENST00000261963 ANKRD23Q86SG2 305 aa23.24■■□□□ 1.31
MCF2L-201ENST00000261963 NAT14Q8WUY8 206 aa23.24■■□□□ 1.31
MCF2L-201ENST00000261963 SRPK1Q96SB4 655 aaKnown RBP23.24■■□□□ 1.31
MCF2L-201ENST00000261963 PIN4Q9Y237 131 aaKnown RBP23.24■■□□□ 1.31
MCF2L-201ENST00000261963 SEC23IPQ9Y6Y8 1000 aaKnown RBP23.24■■□□□ 1.31
MCF2L-201ENST00000261963 ZSCAN9O15535 394 aaPredicted RBP23.23■■□□□ 1.31
MCF2L-201ENST00000261963 TGDSO95455 350 aa23.23■■□□□ 1.31
MCF2L-201ENST00000261963 CD4P01730 458 aa23.23■■□□□ 1.31
MCF2L-201ENST00000261963 SNRPAP09012 282 aaKnown RBP23.23■■□□□ 1.31
MCF2L-201ENST00000261963 PABPC4LP0CB38 370 aaKnown RBP23.23■■□□□ 1.31
MCF2L-201ENST00000261963 CSH1P0DML2 217 aa23.23■■□□□ 1.31
MCF2L-201ENST00000261963 CSH2P0DML3 217 aa23.23■■□□□ 1.31
MCF2L-201ENST00000261963 BGNP21810 368 aa23.23■■□□□ 1.31
MCF2L-201ENST00000261963 MAP7Q14244 749 aa23.23■■□□□ 1.31
MCF2L-201ENST00000261963 TRMT10BQ6PF06 316 aaKnown RBP23.23■■□□□ 1.31
MCF2L-201ENST00000261963 PLEKHH3Q7Z736 793 aa23.23■■□□□ 1.31
MCF2L-201ENST00000261963 TMPRSS6Q8IU80 811 aa23.23■■□□□ 1.31
MCF2L-201ENST00000261963 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.23■■□□□ 1.31
MCF2L-201ENST00000261963 B2RBV5 119 aa23.23■■□□□ 1.31
MCF2L-201ENST00000261963 GOT1P17174 413 aa23.23■■□□□ 1.31
MCF2L-201ENST00000261963 CDC16Q13042 620 aa23.23■■□□□ 1.31
MCF2L-201ENST00000261963 PCBP1Q15365 356 aaKnown RBP eCLIP23.23■■□□□ 1.31
MCF2L-201ENST00000261963 TRMT5Q32P41 509 aaKnown RBP23.23■■□□□ 1.31
MCF2L-201ENST00000261963 PRAMEF19Q5SWL8 479 aa23.23■■□□□ 1.31
MCF2L-201ENST00000261963 UBXN11Q5T124 520 aa23.23■■□□□ 1.31
MCF2L-201ENST00000261963 DNAJB3Q8WWF6 145 aa23.23■■□□□ 1.31
MCF2L-201ENST00000261963 NDRG1Q92597 394 aaKnown RBP23.23■■□□□ 1.31
MCF2L-201ENST00000261963 HSFY1Q96LI6 401 aa23.23■■□□□ 1.31
MCF2L-201ENST00000261963 EBNA1BP2Q99848 306 aaKnown RBP23.23■■□□□ 1.31
MCF2L-201ENST00000261963 SNX25Q9H3E2 840 aa23.23■■□□□ 1.31
MCF2L-201ENST00000261963 SPON1Q9HCB6 807 aa23.23■■□□□ 1.31
MCF2L-201ENST00000261963 TTC36A6NLP5 189 aa23.22■■□□□ 1.31
MCF2L-201ENST00000261963 FCHO1O14526 889 aa23.22■■□□□ 1.31
MCF2L-201ENST00000261963 COPEO14579 308 aa23.22■■□□□ 1.31
MCF2L-201ENST00000261963 RNASEH1O60930 286 aaKnown RBP23.22■■□□□ 1.31
MCF2L-201ENST00000261963 RFPL1O75677 317 aa23.22■■□□□ 1.31
MCF2L-201ENST00000261963 KRT37O76014 449 aa23.22■■□□□ 1.31
MCF2L-201ENST00000261963 BAG2O95816 211 aa23.22■■□□□ 1.31
MCF2L-201ENST00000261963 VAV1P15498 845 aa23.22■■□□□ 1.31
MCF2L-201ENST00000261963 ACADSBP45954 432 aa23.22■■□□□ 1.31
MCF2L-201ENST00000261963 SCNN1BP51168 640 aa23.22■■□□□ 1.31
MCF2L-201ENST00000261963 SNX17Q15036 470 aa23.22■■□□□ 1.31
MCF2L-201ENST00000261963 XKR4Q5GH76 650 aa23.22■■□□□ 1.31
MCF2L-201ENST00000261963 RIPOR1Q6ZS17 1223 aa23.22■■□□□ 1.31
MCF2L-201ENST00000261963 MYLK4Q86YV6 388 aaPredicted RBP23.22■■□□□ 1.31
MCF2L-201ENST00000261963 SCUBE1Q8IWY4 988 aa23.22■■□□□ 1.31
MCF2L-201ENST00000261963 MIPOL1Q8TD10 442 aa23.22■■□□□ 1.31
MCF2L-201ENST00000261963 OXNAD1Q96HP4 312 aaPredicted RBP23.22■■□□□ 1.31
MCF2L-201ENST00000261963 ADAM17P78536 824 aa23.22■■□□□ 1.31
MCF2L-201ENST00000261963 SEMA5AQ13591 1074 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms