RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 ZNF699Q32M78 642 aa13.3□□□□□ -0.28
TMEM260-201ENST00000261556 MROH9Q5TGP6 573 aa13.3□□□□□ -0.28
TMEM260-201ENST00000261556 RWDD4Q6NW29 188 aaKnown RBP13.3□□□□□ -0.28
TMEM260-201ENST00000261556 SLC22A16Q86VW1 577 aa13.3□□□□□ -0.28
TMEM260-201ENST00000261556 KCTD6Q8NC69 237 aa13.3□□□□□ -0.28
TMEM260-201ENST00000261556 GIPC2Q8TF65 315 aa13.3□□□□□ -0.28
TMEM260-201ENST00000261556 TMEM109Q9BVC6 243 aa13.3□□□□□ -0.28
TMEM260-201ENST00000261556 DNAJC18Q9H819 358 aa13.3□□□□□ -0.28
TMEM260-201ENST00000261556 IARS2Q9NSE4 1012 aaKnown RBP13.3□□□□□ -0.28
TMEM260-201ENST00000261556 COPG2Q9UBF2 871 aa13.3□□□□□ -0.28
TMEM260-201ENST00000261556 CDH22Q9UJ99 828 aa13.3□□□□□ -0.28
TMEM260-201ENST00000261556 VPS4AQ9UN37 437 aa13.3□□□□□ -0.28
TMEM260-201ENST00000261556 RWDD3Q9Y3V2 267 aa13.3□□□□□ -0.28
TMEM260-201ENST00000261556 FAM25AB3EWG3 89 aa13.3□□□□□ -0.28
TMEM260-201ENST00000261556 FAM25CB3EWG5 89 aa13.3□□□□□ -0.28
TMEM260-201ENST00000261556 FAM25GB3EWG6 89 aa13.3□□□□□ -0.28
TMEM260-201ENST00000261556 GNGT2O14610 69 aa13.3□□□□□ -0.28
TMEM260-201ENST00000261556 SLC4A1P02730 911 aa13.3□□□□□ -0.28
TMEM260-201ENST00000261556 MYBP10242 640 aa13.3□□□□□ -0.28
TMEM260-201ENST00000261556 ALDH4A1P30038 563 aa13.3□□□□□ -0.28
TMEM260-201ENST00000261556 TNFAIP2Q03169 654 aa13.3□□□□□ -0.28
TMEM260-201ENST00000261556 TBCCQ15814 346 aa13.3□□□□□ -0.28
TMEM260-201ENST00000261556 PKN1Q16512 942 aa13.3□□□□□ -0.28
TMEM260-201ENST00000261556 PLEKHM3Q6ZWE6 761 aa13.3□□□□□ -0.28
TMEM260-201ENST00000261556 DDIASQ8IXT1 998 aa13.3□□□□□ -0.28
TMEM260-201ENST00000261556 OR8H2Q8N162 312 aa13.3□□□□□ -0.28
TMEM260-201ENST00000261556 RYBPQ8N488 228 aaPredicted RBP13.3□□□□□ -0.28
TMEM260-201ENST00000261556 C7orf57Q8NEG2 295 aa13.3□□□□□ -0.28
TMEM260-201ENST00000261556 FAM163AQ96GL9 167 aaPredicted RBP13.3□□□□□ -0.28
TMEM260-201ENST00000261556 POLR3FQ9H1D9 316 aaPredicted RBP13.3□□□□□ -0.28
TMEM260-201ENST00000261556 ATP13A3Q9H7F0 1226 aa13.3□□□□□ -0.28
TMEM260-201ENST00000261556 AVENQ9NQS1 362 aaPredicted RBP13.3□□□□□ -0.28
TMEM260-201ENST00000261556 MKL2Q9ULH7 1088 aa13.3□□□□□ -0.28
TMEM260-201ENST00000261556 AP4E1Q9UPM8 1137 aa13.3□□□□□ -0.28
TMEM260-201ENST00000261556 C19orf81C9J6K1 198 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 PTGES3LE9PB15 166 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 VWA5AO00534 786 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 VAMP7P51809 220 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 TROAPQ12815 778 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 SNX17Q15036 470 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 C2CD6Q53TS8 623 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 RALGPS2Q86X27 583 aaPredicted RBP13.29□□□□□ -0.28
TMEM260-201ENST00000261556 SCN4BQ8IWT1 228 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 ASCC1Q8N9N2 400 aaKnown RBP13.29□□□□□ -0.28
TMEM260-201ENST00000261556 PBXIP1Q96AQ6 731 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 HES6Q96HZ4 224 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 C11orf70Q9BRQ4 267 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 LRRC4BQ9NT99 713 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 DNAJC28Q9NX36 388 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 KNDC1Q76NI1 1749 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 ASB14A6NK59 587 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 DYNC1LI2O43237 492 aaPredicted RBP13.29□□□□□ -0.28
TMEM260-201ENST00000261556 BNIP3LO60238 219 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 ANXA13P27216 316 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 MOGSQ13724 837 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 LAMC2Q13753 1193 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 SLCO6A1Q86UG4 719 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 METTL25Q8N6Q8 603 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 SKA2Q8WVK7 121 aaPredicted RBP13.29□□□□□ -0.28
TMEM260-201ENST00000261556 ASB12Q8WXK4 309 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 C8orf48Q96LL4 319 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 IL1RL2Q9HB29 575 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 DEPDC5O75140 1603 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 HUS1O60921 280 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 SEC24AO95486 1093 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 ZSCAN5DPP0CG00 497 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 PPP4CP60510 307 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 DGCR6Q14129 220 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 RPS6KA2Q15349 733 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 FAM214AQ32MH5 1076 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 NAALADL2Q58DX5 795 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 MTX3Q5HYI7 312 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 FGD3Q5JSP0 725 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 C11orf63Q6NUN7 778 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 TTC23LQ6PF05 361 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 CYP20A1Q6UW02 462 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 PHC2Q8IXK0 858 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 CDKL2Q92772 493 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 TMEM246Q9BRR3 403 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 BRD7Q9NPI1 651 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 SLC35C2Q9NQQ7 365 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 MAN1C1Q9NR34 630 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 KBTBD4Q9NVX7 518 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 MRPL39Q9NYK5 338 aaKnown RBP13.29□□□□□ -0.28
TMEM260-201ENST00000261556 HACL1Q9UJ83 578 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 KLHL20Q9Y2M5 609 aa13.29□□□□□ -0.28
TMEM260-201ENST00000261556 H3BNX3 289 aa13.28□□□□□ -0.28
TMEM260-201ENST00000261556 VDRP11473 427 aa13.28□□□□□ -0.28
TMEM260-201ENST00000261556 CETPP11597 493 aa13.28□□□□□ -0.28
TMEM260-201ENST00000261556 XPAP23025 273 aaPredicted RBP13.28□□□□□ -0.28
TMEM260-201ENST00000261556 SSTR3P32745 418 aaPredicted RBP13.28□□□□□ -0.28
TMEM260-201ENST00000261556 BMXP51813 675 aa13.28□□□□□ -0.28
TMEM260-201ENST00000261556 RPL10AP62906 217 aaKnown RBP13.28□□□□□ -0.28
TMEM260-201ENST00000261556 SUZ12Q15022 739 aaKnown RBP13.28□□□□□ -0.28
TMEM260-201ENST00000261556 CCDC58Q4VC31 144 aa13.28□□□□□ -0.28
TMEM260-201ENST00000261556 FBXL19Q6PCT2 694 aa13.28□□□□□ -0.28
TMEM260-201ENST00000261556 C16orf62Q7Z3J2 963 aa13.28□□□□□ -0.28
TMEM260-201ENST00000261556 ALLCQ8N6M5 410 aa13.28□□□□□ -0.28
TMEM260-201ENST00000261556 LRRC39Q96DD0 335 aa13.28□□□□□ -0.28
TMEM260-201ENST00000261556 ATG4CQ96DT6 458 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms