RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 KIF9Q9HAQ2 790 aa16.12■□□□□ 0.17
GYPC-201ENST00000259254 GDE1Q9NZC3 331 aa16.12■□□□□ 0.17
GYPC-201ENST00000259254 SMARCAL1Q9NZC9 954 aa16.12■□□□□ 0.17
GYPC-201ENST00000259254 CDC23Q9UJX2 597 aa16.12■□□□□ 0.17
GYPC-201ENST00000259254 AGO1Q9UL18 857 aaKnown RBP16.12■□□□□ 0.17
GYPC-201ENST00000259254 C5orf42Q9H799 3197 aa16.11■□□□□ 0.17
GYPC-201ENST00000259254 hCG_1818297A0A087WSY0 165 aa16.11■□□□□ 0.17
GYPC-201ENST00000259254 C3orf70A6NLC5 250 aaPredicted RBP16.11■□□□□ 0.17
GYPC-201ENST00000259254 F5H5T6 163 aa16.11■□□□□ 0.17
GYPC-201ENST00000259254 PGRMC1O00264 195 aaKnown RBP16.11■□□□□ 0.17
GYPC-201ENST00000259254 FGGP02679 453 aa16.11■□□□□ 0.17
GYPC-201ENST00000259254 KLKB1P03952 638 aa16.11■□□□□ 0.17
GYPC-201ENST00000259254 EPHB2P29323 1055 aa16.11■□□□□ 0.17
GYPC-201ENST00000259254 ZNF135P52742 658 aaPredicted RBP16.11■□□□□ 0.17
GYPC-201ENST00000259254 MLLT6P55198 1093 aaPredicted RBP16.11■□□□□ 0.17
GYPC-201ENST00000259254 DYNLT1P63172 113 aa16.11■□□□□ 0.17
GYPC-201ENST00000259254 ZXDBP98169 803 aa16.11■□□□□ 0.17
GYPC-201ENST00000259254 AUHQ13825 339 aaKnown RBP16.11■□□□□ 0.17
GYPC-201ENST00000259254 TUBB2AQ13885 445 aa16.11■□□□□ 0.17
GYPC-201ENST00000259254 PPP2R5EQ16537 467 aa16.11■□□□□ 0.17
GYPC-201ENST00000259254 FAM78AQ5JUQ0 283 aa16.11■□□□□ 0.17
GYPC-201ENST00000259254 ACBD5Q5T8D3 534 aaPredicted RBP16.11■□□□□ 0.17
GYPC-201ENST00000259254 RFX8Q6ZV50 586 aa16.11■□□□□ 0.17
GYPC-201ENST00000259254 ADAT2Q7Z6V5 191 aaKnown RBP16.11■□□□□ 0.17
GYPC-201ENST00000259254 C14orf80Q86SX3 495 aa16.11■□□□□ 0.17
GYPC-201ENST00000259254 LGI2Q8N0V4 545 aa16.11■□□□□ 0.17
GYPC-201ENST00000259254 CELF5Q8N6W0 485 aaKnown RBP16.11■□□□□ 0.17
GYPC-201ENST00000259254 SMARCD2Q92925 531 aa16.11■□□□□ 0.17
GYPC-201ENST00000259254 AZIN2Q96A70 460 aa16.11■□□□□ 0.17
GYPC-201ENST00000259254 TBC1D31Q96DN5 1066 aa16.11■□□□□ 0.17
GYPC-201ENST00000259254 C1orf74Q96LT6 269 aa16.11■□□□□ 0.17
GYPC-201ENST00000259254 RPRD1AQ96P16 312 aaPredicted RBP16.11■□□□□ 0.17
GYPC-201ENST00000259254 CSPG4P5Q96PW8 444 aa16.11■□□□□ 0.17
GYPC-201ENST00000259254 NAP1L3Q99457 506 aaPredicted RBP16.11■□□□□ 0.17
GYPC-201ENST00000259254 TUBB2BQ9BVA1 445 aa16.11■□□□□ 0.17
GYPC-201ENST00000259254 CWC15Q9P013 229 aaKnown RBP16.11■□□□□ 0.17
GYPC-201ENST00000259254 RCOR3Q9P2K3 495 aaPredicted RBP16.11■□□□□ 0.17
GYPC-201ENST00000259254 VANGL2Q9ULK5 521 aa16.11■□□□□ 0.17
GYPC-201ENST00000259254 ZNF510Q9Y2H8 683 aa16.11■□□□□ 0.17
GYPC-201ENST00000259254 GREB1Q4ZG55 1949 aa16.11■□□□□ 0.17
GYPC-201ENST00000259254 E2F8A0AVK6 867 aa16.1■□□□□ 0.17
GYPC-201ENST00000259254 E9PAM4 449 aa16.1■□□□□ 0.17
GYPC-201ENST00000259254 TSPAN3O60637 253 aa16.1■□□□□ 0.17
GYPC-201ENST00000259254 LRIG2O94898 1065 aa16.1■□□□□ 0.17
GYPC-201ENST00000259254 LATS1O95835 1130 aa16.1■□□□□ 0.17
GYPC-201ENST00000259254 VIPR2P41587 438 aa16.1■□□□□ 0.17
GYPC-201ENST00000259254 CKAP4Q07065 602 aaKnown RBP16.1■□□□□ 0.17
GYPC-201ENST00000259254 USP4Q13107 963 aa16.1■□□□□ 0.17
GYPC-201ENST00000259254 TFDP2Q14188 446 aa16.1■□□□□ 0.17
GYPC-201ENST00000259254 WHAMMP3Q1A5X7 153 aa16.1■□□□□ 0.17
GYPC-201ENST00000259254 ANKRD20A8PQ5CZ79 823 aa16.1■□□□□ 0.17
GYPC-201ENST00000259254 NADSYN1Q6IA69 706 aa16.1■□□□□ 0.17
GYPC-201ENST00000259254 RFWD3Q6PCD5 774 aa16.1■□□□□ 0.17
GYPC-201ENST00000259254 POTEHQ6S545 545 aa16.1■□□□□ 0.17
GYPC-201ENST00000259254 HTR3DQ70Z44 454 aa16.1■□□□□ 0.17
GYPC-201ENST00000259254 ANKS1BQ7Z6G8 1248 aa16.1■□□□□ 0.17
GYPC-201ENST00000259254 SLC13A5Q86YT5 568 aaPredicted RBP16.1■□□□□ 0.17
GYPC-201ENST00000259254 RASGEF1CQ8N431 466 aa16.1■□□□□ 0.17
GYPC-201ENST00000259254 FAM71BQ8TC56 605 aa16.1■□□□□ 0.17
GYPC-201ENST00000259254 SUSD6Q92537 303 aa16.1■□□□□ 0.17
GYPC-201ENST00000259254 RNF157Q96PX1 679 aa16.1■□□□□ 0.17
GYPC-201ENST00000259254 MYADMQ96S97 322 aa16.1■□□□□ 0.17
GYPC-201ENST00000259254 RNF14Q9UBS8 474 aa16.1■□□□□ 0.17
GYPC-201ENST00000259254 MRFAP1Q9Y605 127 aa16.1■□□□□ 0.17
GYPC-201ENST00000259254 TRDMT1O14717 391 aaKnown RBP16.09■□□□□ 0.17
GYPC-201ENST00000259254 APOL1O14791 398 aa16.09■□□□□ 0.17
GYPC-201ENST00000259254 CST8O60676 142 aa16.09■□□□□ 0.17
GYPC-201ENST00000259254 TJP3O95049 919 aa16.09■□□□□ 0.17
GYPC-201ENST00000259254 ALADP13716 330 aa16.09■□□□□ 0.17
GYPC-201ENST00000259254 COL9A1P20849 921 aa16.09■□□□□ 0.17
GYPC-201ENST00000259254 AMPD1P23109 780 aa16.09■□□□□ 0.17
GYPC-201ENST00000259254 WEE1P30291 646 aa16.09■□□□□ 0.17
GYPC-201ENST00000259254 HTR7P34969 479 aa16.09■□□□□ 0.17
GYPC-201ENST00000259254 PTPN7P35236 360 aa16.09■□□□□ 0.17
GYPC-201ENST00000259254 VCPP55072 806 aaKnown RBP16.09■□□□□ 0.17
GYPC-201ENST00000259254 SEMA3BQ13214 749 aa16.09■□□□□ 0.17
GYPC-201ENST00000259254 ZNF77Q15935 545 aa16.09■□□□□ 0.17
GYPC-201ENST00000259254 FAM133BQ5BKY9 247 aaKnown RBP16.09■□□□□ 0.17
GYPC-201ENST00000259254 TMEM31Q5JXX7 168 aa16.09■□□□□ 0.17
GYPC-201ENST00000259254 RABGAP1LQ5R372 815 aa16.09■□□□□ 0.17
GYPC-201ENST00000259254 ADGRF1Q5T601 910 aa16.09■□□□□ 0.17
GYPC-201ENST00000259254 FBXL22Q6P050 247 aa16.09■□□□□ 0.17
GYPC-201ENST00000259254 Q6ZNB5 142 aa16.09■□□□□ 0.17
GYPC-201ENST00000259254 VSIG1Q86XK7 387 aa16.09■□□□□ 0.17
GYPC-201ENST00000259254 CREG2Q8IUH2 290 aa16.09■□□□□ 0.17
GYPC-201ENST00000259254 BBS7Q8IWZ6 715 aa16.09■□□□□ 0.17
GYPC-201ENST00000259254 PCDH19Q8TAB3 1148 aa16.09■□□□□ 0.17
GYPC-201ENST00000259254 ACTRT1Q8TDG2 376 aa16.09■□□□□ 0.17
GYPC-201ENST00000259254 MAIP1Q8WWC4 291 aa16.09■□□□□ 0.17
GYPC-201ENST00000259254 TSC1Q92574 1164 aa16.09■□□□□ 0.17
GYPC-201ENST00000259254 ASB16Q96NS5 453 aa16.09■□□□□ 0.17
GYPC-201ENST00000259254 C11orf16Q9NQ32 467 aa16.09■□□□□ 0.17
GYPC-201ENST00000259254 MTCL1Q9Y4B5 1905 aaKnown RBP16.09■□□□□ 0.17
GYPC-201ENST00000259254 TYW5A2RUC4 315 aaKnown RBP16.08■□□□□ 0.16
GYPC-201ENST00000259254 ZNF487B1APH4 448 aa16.08■□□□□ 0.16
GYPC-201ENST00000259254 KRIT1O00522 736 aa16.08■□□□□ 0.16
GYPC-201ENST00000259254 DCXO43602 365 aa16.08■□□□□ 0.16
GYPC-201ENST00000259254 GREM1O60565 184 aa16.08■□□□□ 0.16
GYPC-201ENST00000259254 GPR37L1O60883 481 aa16.08■□□□□ 0.16
GYPC-201ENST00000259254 ERCC2P18074 760 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms