RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 SLCO1B7G3V0H7 640 aa13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 FOXN3O00409 490 aaPredicted RBP13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 FOSL2P15408 326 aa13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 ACAT1P24752 427 aaKnown RBP13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 TKTP29401 623 aaKnown RBP13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 CCND3P30281 292 aaPredicted RBP13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 CDH4P55283 916 aa13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 MRPS5P82675 430 aaKnown RBP13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 MBTD1Q05BQ5 628 aa13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 IFT88Q13099 833 aa13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 ITGB3BPQ13352 177 aaPredicted RBP13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 SEZ6Q53EL9 994 aa13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 NCLNQ969V3 563 aa13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 RBBP8Q99708 897 aa13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 TEKT2Q9UIF3 430 aa13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 KATNA1O75449 491 aa13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 NFICP08651 508 aa13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 NCAPHQ15003 741 aa13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 RBM23Q86U06 439 aaKnown RBP13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 LRRC39Q96DD0 335 aa13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 TKTL2Q9H0I9 626 aa13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 OSGEPL1Q9H4B0 414 aa13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 ZDHHC6Q9H6R6 413 aa13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 CPSF2Q9P2I0 782 aaKnown RBP13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 PCDHAC2Q9Y5I4 1007 aa13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 PKD1L3Q7Z443 1732 aa13.75□□□□□ -0.21
PRPF38A-201ENST00000257181 H3BQF6 201 aa13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 INPP4BO15327 924 aa13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 CST5P28325 142 aaPredicted RBP13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 TLX1P31314 330 aaPredicted RBP13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 RPL3P39023 403 aaKnown RBP13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 HSDL1Q3SXM5 330 aa13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 XKR4Q5GH76 650 aa13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 ILDR2Q71H61 639 aa13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 AGAP3Q96P47 875 aa13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 ARL5CA6NH57 179 aa13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 CCL16O15467 120 aa13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 TSPAN3O60637 253 aa13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 SOD2P04179 222 aa13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 MPOP05164 745 aa13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 GUCA1AP43080 201 aaPredicted RBP13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 GPR1P46091 355 aa13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 NRLP54845 237 aa13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 RALGPS1Q5JS13 557 aa13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 TMEM164Q5U3C3 297 aa13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 PDPK2PQ6A1A2 396 aa13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 ANO5Q75V66 913 aa13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 CYP2W1Q8TAV3 490 aa13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 FICDQ9BVA6 458 aa13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 IRX2Q9BZI1 471 aaPredicted RBP13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 SLC2A4RGQ9NR83 387 aa13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 CHCHD3Q9NX63 227 aaKnown RBP13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 TUBGCP4Q9UGJ1 667 aa13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 NEU2Q9Y3R4 380 aa13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 ARIH1Q9Y4X5 557 aaPredicted RBP13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 AKAP3O75969 853 aa13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 WEE1P30291 646 aa13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 SOX10P56693 466 aa13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 NDUFA9Q16795 377 aa13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 USP39Q53GS9 565 aaKnown RBP13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 HDAC7Q8WUI4 952 aa13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 MRPL48Q96GC5 212 aaKnown RBP13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 THEGQ9P2T0 379 aa13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 SNX12Q9UMY4 172 aa13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 PMPCBO75439 489 aa13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 ZNF143P52747 638 aaPredicted RBP13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 CAPRIN1Q14444 709 aaKnown RBP13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 RFTN1Q14699 578 aaPredicted RBP13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 ALG11Q2TAA5 492 aa13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 MFSD5Q6N075 450 aa13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 DDIASQ8IXT1 998 aa13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 MLPHQ9BV36 600 aaPredicted RBP13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 HERC2P3Q9BVR0 1158 aa13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 WDR6Q9NNW5 1121 aaKnown RBP13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 ARHGAP28Q9P2N2 729 aa13.74□□□□□ -0.21
PRPF38A-201ENST00000257181 AVILO75366 819 aa13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 CDH2P19022 906 aaPredicted RBP13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 CRABP2P29373 138 aa13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 RXRGP48443 463 aa13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 SP2Q02086 613 aa13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 ARID5BQ14865 1188 aa13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 CCDC157Q569K6 752 aa13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 ZNF618Q5T7W0 954 aa13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 MFSD4BQ5TF39 518 aa13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 AFTPHQ6ULP2 937 aa13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 SUSD3Q96L08 255 aa13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 TBL1YQ9BQ87 522 aa13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 WWP1Q9H0M0 922 aa13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 TNPO3Q9Y5L0 923 aaKnown RBP13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 PRLRP16471 622 aa13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 OXTRP30559 389 aa13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 SCNN1AP37088 669 aa13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 KRT78Q8N1N4 520 aa13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 HS6ST1O60243 411 aa13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 CDH16O75309 829 aa13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 VPS4BO75351 444 aa13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 ARIH2O95376 493 aa13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 PIGRP01833 764 aa13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 ANXA5P08758 320 aa13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 C16orf72Q14CZ0 275 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms