RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 ALADP13716 330 aa22.31■■□□□ 1.16
CLN6-201ENST00000249806 KCNJ2P63252 427 aa22.31■■□□□ 1.16
CLN6-201ENST00000249806 OLIG2Q13516 323 aa22.31■■□□□ 1.16
CLN6-201ENST00000249806 MROH9Q5TGP6 573 aa22.31■■□□□ 1.16
CLN6-201ENST00000249806 PID1Q7Z2X4 250 aa22.31■■□□□ 1.16
CLN6-201ENST00000249806 LRRTM3Q86VH5 581 aa22.31■■□□□ 1.16
CLN6-201ENST00000249806 C10orf82Q8WW14 230 aa22.31■■□□□ 1.16
CLN6-201ENST00000249806 SLC13A1Q9BZW2 595 aa22.31■■□□□ 1.16
CLN6-201ENST00000249806 MYLK2Q9H1R3 596 aa22.31■■□□□ 1.16
CLN6-201ENST00000249806 CSNK1G1Q9HCP0 422 aa22.31■■□□□ 1.16
CLN6-201ENST00000249806 NPHS2Q9NP85 383 aa22.31■■□□□ 1.16
CLN6-201ENST00000249806 TRMT13Q9NUP7 481 aaKnown RBP22.31■■□□□ 1.16
CLN6-201ENST00000249806 MOCS1Q9NZB8 636 aa22.31■■□□□ 1.16
CLN6-201ENST00000249806 TRIM33Q9UPN9 1127 aa22.31■■□□□ 1.16
CLN6-201ENST00000249806 USH1CQ9Y6N9 552 aa22.31■■□□□ 1.16
CLN6-201ENST00000249806 COPEO14579 308 aa22.3■■□□□ 1.16
CLN6-201ENST00000249806 TPI1P60174 286 aa22.3■■□□□ 1.16
CLN6-201ENST00000249806 ELF3P78545 371 aaPredicted RBP22.3■■□□□ 1.16
CLN6-201ENST00000249806 SCAPQ12770 1279 aa22.3■■□□□ 1.16
CLN6-201ENST00000249806 PLEKHG4Q58EX7 1191 aa22.3■■□□□ 1.16
CLN6-201ENST00000249806 FAM171BQ6P995 826 aa22.3■■□□□ 1.16
CLN6-201ENST00000249806 LRRC8BQ6P9F7 803 aa22.3■■□□□ 1.16
CLN6-201ENST00000249806 NPWQ8N729 165 aa22.3■■□□□ 1.16
CLN6-201ENST00000249806 ACBD6Q9BR61 282 aa22.3■■□□□ 1.16
CLN6-201ENST00000249806 WDCPQ9H6R7 721 aa22.3■■□□□ 1.16
CLN6-201ENST00000249806 SLC17A6Q9P2U8 582 aa22.3■■□□□ 1.16
CLN6-201ENST00000249806 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.3■■□□□ 1.16
CLN6-201ENST00000249806 SDR42E2A6NKP2 422 aa22.3■■□□□ 1.16
CLN6-201ENST00000249806 YY1P25490 414 aa22.3■■□□□ 1.16
CLN6-201ENST00000249806 MGAT1P26572 445 aa22.3■■□□□ 1.16
CLN6-201ENST00000249806 TM4SF4P48230 202 aa22.3■■□□□ 1.16
CLN6-201ENST00000249806 CDK16Q00536 496 aa22.3■■□□□ 1.16
CLN6-201ENST00000249806 DSC3Q14574 896 aa22.3■■□□□ 1.16
CLN6-201ENST00000249806 PARP6Q2NL67 630 aa22.3■■□□□ 1.16
CLN6-201ENST00000249806 LGSNQ5TDP6 509 aa22.3■■□□□ 1.16
CLN6-201ENST00000249806 DEPDC1BQ8WUY9 529 aa22.3■■□□□ 1.16
CLN6-201ENST00000249806 ARNTL2Q8WYA1 636 aa22.3■■□□□ 1.16
CLN6-201ENST00000249806 PGAP3Q96FM1 320 aaPredicted RBP22.3■■□□□ 1.16
CLN6-201ENST00000249806 TKTL2Q9H0I9 626 aa22.3■■□□□ 1.16
CLN6-201ENST00000249806 MLNP12872 115 aa22.29■■□□□ 1.16
CLN6-201ENST00000249806 ELNP15502 786 aa22.29■■□□□ 1.16
CLN6-201ENST00000249806 AIF1P55008 147 aa22.29■■□□□ 1.16
CLN6-201ENST00000249806 INTS6LQ5JSJ4 861 aaKnown RBP22.29■■□□□ 1.16
CLN6-201ENST00000249806 PARP9Q8IXQ6 854 aa22.29■■□□□ 1.16
CLN6-201ENST00000249806 KIF2BQ8N4N8 673 aa22.29■■□□□ 1.16
CLN6-201ENST00000249806 OR10T2Q8NGX3 314 aa22.29■■□□□ 1.16
CLN6-201ENST00000249806 PGBD4Q96DM1 585 aa22.29■■□□□ 1.16
CLN6-201ENST00000249806 ERP27Q96DN0 273 aa22.29■■□□□ 1.16
CLN6-201ENST00000249806 FERMT1Q9BQL6 677 aa22.29■■□□□ 1.16
CLN6-201ENST00000249806 BGNP21810 368 aa22.29■■□□□ 1.16
CLN6-201ENST00000249806 NKX3-2P78367 333 aa22.29■■□□□ 1.16
CLN6-201ENST00000249806 SMAD1Q15797 465 aaKnown RBP22.29■■□□□ 1.16
CLN6-201ENST00000249806 METTL23Q86XA0 190 aa22.29■■□□□ 1.16
CLN6-201ENST00000249806 KLHDC9Q8NEP7 349 aa22.29■■□□□ 1.16
CLN6-201ENST00000249806 SCAMP5Q8TAC9 235 aa22.29■■□□□ 1.16
CLN6-201ENST00000249806 AGAP3Q96P47 875 aa22.29■■□□□ 1.16
CLN6-201ENST00000249806 PGLYRP2Q96PD5 576 aa22.29■■□□□ 1.16
CLN6-201ENST00000249806 LRRC37BQ96QE4 947 aa22.29■■□□□ 1.16
CLN6-201ENST00000249806 IQCGQ9H095 443 aaKnown RBP22.29■■□□□ 1.16
CLN6-201ENST00000249806 OR12D3Q9UGF7 316 aa22.29■■□□□ 1.16
CLN6-201ENST00000249806 KRT38O76015 456 aa22.28■■□□□ 1.16
CLN6-201ENST00000249806 NEFHP12036 1026 aa22.28■■□□□ 1.16
CLN6-201ENST00000249806 RAB27AP51159 221 aa22.28■■□□□ 1.16
CLN6-201ENST00000249806 CCDC15Q0P6D6 951 aa22.28■■□□□ 1.16
CLN6-201ENST00000249806 IFRD2Q12894 506 aaPredicted RBP22.28■■□□□ 1.16
CLN6-201ENST00000249806 ARL13BQ3SXY8 428 aa22.28■■□□□ 1.16
CLN6-201ENST00000249806 CCSAPQ6IQ19 270 aaPredicted RBP22.28■■□□□ 1.16
CLN6-201ENST00000249806 KLHL29Q96CT2 875 aa22.28■■□□□ 1.16
CLN6-201ENST00000249806 DCTN4Q9UJW0 460 aa22.28■■□□□ 1.16
CLN6-201ENST00000249806 ABT1Q9ULW3 272 aaKnown RBP22.28■■□□□ 1.16
CLN6-201ENST00000249806 TLL2Q9Y6L7 1015 aa22.28■■□□□ 1.16
CLN6-201ENST00000249806 TTC3P53804 2025 aa22.28■■□□□ 1.16
CLN6-201ENST00000249806 SHROOM3Q8TF72 1996 aa22.28■■□□□ 1.16
CLN6-201ENST00000249806 PTPN3P26045 913 aa22.27■■□□□ 1.16
CLN6-201ENST00000249806 SERPINB4P48594 390 aa22.27■■□□□ 1.16
CLN6-201ENST00000249806 PM20D1Q6GTS8 502 aa22.27■■□□□ 1.16
CLN6-201ENST00000249806 CHSY1Q86X52 802 aa22.27■■□□□ 1.16
CLN6-201ENST00000249806 RFWD2Q8NHY2 731 aa22.27■■□□□ 1.16
CLN6-201ENST00000249806 EIF2B3Q9NR50 452 aaKnown RBP22.27■■□□□ 1.16
CLN6-201ENST00000249806 IL1RAPL1Q9NZN1 696 aa22.27■■□□□ 1.16
CLN6-201ENST00000249806 KLHL8Q9P2G9 620 aaPredicted RBP22.27■■□□□ 1.16
CLN6-201ENST00000249806 PLLPQ9Y342 182 aa22.27■■□□□ 1.16
CLN6-201ENST00000249806 CYP11A1P05108 521 aa22.27■■□□□ 1.16
CLN6-201ENST00000249806 PRKAR2AP13861 404 aaKnown RBP22.27■■□□□ 1.16
CLN6-201ENST00000249806 CXCR3P49682 368 aa22.27■■□□□ 1.16
CLN6-201ENST00000249806 SETDB1Q15047 1291 aa22.27■■□□□ 1.16
CLN6-201ENST00000249806 STEAP4Q687X5 459 aa22.27■■□□□ 1.16
CLN6-201ENST00000249806 CES3Q6UWW8 571 aa22.27■■□□□ 1.16
CLN6-201ENST00000249806 TAC4Q86UU9 113 aa22.27■■□□□ 1.16
CLN6-201ENST00000249806 RSPH1Q8WYR4 309 aa22.27■■□□□ 1.16
CLN6-201ENST00000249806 PKMYT1Q99640 499 aa22.27■■□□□ 1.16
CLN6-201ENST00000249806 GORASP1Q9BQQ3 440 aa22.27■■□□□ 1.16
CLN6-201ENST00000249806 MECRQ9BV79 373 aa22.27■■□□□ 1.16
CLN6-201ENST00000249806 TSSK1BQ9BXA7 367 aa22.27■■□□□ 1.16
CLN6-201ENST00000249806 SYBUQ9NX95 663 aa22.27■■□□□ 1.16
CLN6-201ENST00000249806 IGSF9Q9P2J2 1179 aa22.27■■□□□ 1.16
CLN6-201ENST00000249806 CFAP73A6NFT4 308 aa22.26■■□□□ 1.15
CLN6-201ENST00000249806 MGRN1O60291 552 aa22.26■■□□□ 1.15
CLN6-201ENST00000249806 USP12O75317 370 aa22.26■■□□□ 1.15
CLN6-201ENST00000249806 ALDH1A2O94788 518 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms