RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 ELOVL2Q9NXB9 296 aa25.2■■□□□ 1.62
SDF2L1-201ENST00000248958 ARHGEF38Q9NXL2 777 aa25.2■■□□□ 1.62
SDF2L1-201ENST00000248958 HCN2Q9UL51 889 aa25.2■■□□□ 1.62
SDF2L1-201ENST00000248958 BZW2Q9Y6E2 419 aaKnown RBP25.2■■□□□ 1.62
SDF2L1-201ENST00000248958 FAM170AA1A519 330 aa25.19■■□□□ 1.62
SDF2L1-201ENST00000248958 PABPC1P11940 636 aaKnown RBP25.19■■□□□ 1.62
SDF2L1-201ENST00000248958 KRT3P12035 628 aa25.19■■□□□ 1.62
SDF2L1-201ENST00000248958 HLA-FP30511 346 aa25.19■■□□□ 1.62
SDF2L1-201ENST00000248958 RABGAP1LQ5R372 815 aa25.19■■□□□ 1.62
SDF2L1-201ENST00000248958 OTUD1Q5VV17 481 aaPredicted RBP25.19■■□□□ 1.62
SDF2L1-201ENST00000248958 TMEM92Q6UXU6 159 aa25.19■■□□□ 1.62
SDF2L1-201ENST00000248958 ASCL5Q7RTU5 278 aa25.19■■□□□ 1.62
SDF2L1-201ENST00000248958 BNIPLQ7Z465 357 aa25.19■■□□□ 1.62
SDF2L1-201ENST00000248958 SUMF1Q8NBK3 374 aa25.19■■□□□ 1.62
SDF2L1-201ENST00000248958 TBCBQ99426 244 aa25.19■■□□□ 1.62
SDF2L1-201ENST00000248958 GABRG3Q99928 467 aa25.19■■□□□ 1.62
SDF2L1-201ENST00000248958 XPO4Q9C0E2 1151 aaKnown RBP25.19■■□□□ 1.62
SDF2L1-201ENST00000248958 STIM2Q9P246 746 aa25.19■■□□□ 1.62
SDF2L1-201ENST00000248958 THAP10Q9P2Z0 257 aaPredicted RBP25.19■■□□□ 1.62
SDF2L1-201ENST00000248958 RAB23Q9ULC3 237 aa25.19■■□□□ 1.62
SDF2L1-201ENST00000248958 CAPN11Q9UMQ6 739 aa25.19■■□□□ 1.62
SDF2L1-201ENST00000248958 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.19■■□□□ 1.62
SDF2L1-201ENST00000248958 ZBTB24O43167 697 aaPredicted RBP25.18■■□□□ 1.62
SDF2L1-201ENST00000248958 ENDOD1O94919 500 aa25.18■■□□□ 1.62
SDF2L1-201ENST00000248958 LUC7L3O95232 432 aaKnown RBP25.18■■□□□ 1.62
SDF2L1-201ENST00000248958 HOXB2P14652 356 aa25.18■■□□□ 1.62
SDF2L1-201ENST00000248958 SDC4P31431 198 aa25.18■■□□□ 1.62
SDF2L1-201ENST00000248958 RDXP35241 583 aaKnown RBP25.18■■□□□ 1.62
SDF2L1-201ENST00000248958 RPS24P62847 133 aaKnown RBP25.18■■□□□ 1.62
SDF2L1-201ENST00000248958 ZBED6P86452 979 aa25.18■■□□□ 1.62
SDF2L1-201ENST00000248958 GAB3Q8WWW8 586 aa25.18■■□□□ 1.62
SDF2L1-201ENST00000248958 CFAP57Q96MR6 1250 aa25.18■■□□□ 1.62
SDF2L1-201ENST00000248958 TKTL2Q9H0I9 626 aa25.18■■□□□ 1.62
SDF2L1-201ENST00000248958 ZDHHC4Q9NPG8 344 aa25.18■■□□□ 1.62
SDF2L1-201ENST00000248958 ABCB8Q9NUT2 735 aa25.18■■□□□ 1.62
SDF2L1-201ENST00000248958 CALCOCO1Q9P1Z2 691 aa25.18■■□□□ 1.62
SDF2L1-201ENST00000248958 GGA2Q9UJY4 613 aa25.18■■□□□ 1.62
SDF2L1-201ENST00000248958 EML5Q05BV3 1969 aa25.18■■□□□ 1.62
SDF2L1-201ENST00000248958 SIGLEC16A6NMB1 481 aa25.17■■□□□ 1.62
SDF2L1-201ENST00000248958 HRO43593 1189 aa25.17■■□□□ 1.62
SDF2L1-201ENST00000248958 GZMAP12544 262 aa25.17■■□□□ 1.62
SDF2L1-201ENST00000248958 PDGFRAP16234 1089 aa25.17■■□□□ 1.62
SDF2L1-201ENST00000248958 PTPN9P43378 593 aa25.17■■□□□ 1.62
SDF2L1-201ENST00000248958 PXNP49023 591 aaPredicted RBP25.17■■□□□ 1.62
SDF2L1-201ENST00000248958 CDH18Q13634 790 aa25.17■■□□□ 1.62
SDF2L1-201ENST00000248958 SIM2Q14190 667 aaPredicted RBP25.17■■□□□ 1.62
SDF2L1-201ENST00000248958 TRNP1Q6NT89 227 aa25.17■■□□□ 1.62
SDF2L1-201ENST00000248958 CHST9Q7L1S5 443 aa25.17■■□□□ 1.62
SDF2L1-201ENST00000248958 MCOLN2Q8IZK6 566 aa25.17■■□□□ 1.62
SDF2L1-201ENST00000248958 CARNMT1Q8N4J0 409 aa25.17■■□□□ 1.62
SDF2L1-201ENST00000248958 RXFP2Q8WXD0 754 aa25.17■■□□□ 1.62
SDF2L1-201ENST00000248958 CIPCQ9C0C6 399 aa25.17■■□□□ 1.62
SDF2L1-201ENST00000248958 C2CD4BA6NLJ0 364 aa25.16■■□□□ 1.62
SDF2L1-201ENST00000248958 PAGE1O75459 146 aa25.16■■□□□ 1.62
SDF2L1-201ENST00000248958 RPP40O75818 363 aaKnown RBP25.16■■□□□ 1.62
SDF2L1-201ENST00000248958 ATP5BP06576 529 aaKnown RBP25.16■■□□□ 1.62
SDF2L1-201ENST00000248958 TFE3P19532 575 aaPredicted RBP25.16■■□□□ 1.62
SDF2L1-201ENST00000248958 HOXC13P31276 330 aa25.16■■□□□ 1.62
SDF2L1-201ENST00000248958 OXCT1P55809 520 aa25.16■■□□□ 1.62
SDF2L1-201ENST00000248958 ENPP2Q13822 863 aa25.16■■□□□ 1.62
SDF2L1-201ENST00000248958 AUHQ13825 339 aaKnown RBP25.16■■□□□ 1.62
SDF2L1-201ENST00000248958 ANO7Q6IWH7 933 aa25.16■■□□□ 1.62
SDF2L1-201ENST00000248958 CEP68Q76N32 757 aa25.16■■□□□ 1.62
SDF2L1-201ENST00000248958 STRADAQ7RTN6 431 aa25.16■■□□□ 1.62
SDF2L1-201ENST00000248958 ZNF571Q7Z3V5 609 aaPredicted RBP25.16■■□□□ 1.62
SDF2L1-201ENST00000248958 C11orf74Q86VG3 221 aa25.16■■□□□ 1.62
SDF2L1-201ENST00000248958 CFAP52Q8N1V2 620 aa25.16■■□□□ 1.62
SDF2L1-201ENST00000248958 EMC1Q8N766 993 aa25.16■■□□□ 1.62
SDF2L1-201ENST00000248958 C1orf74Q96LT6 269 aa25.16■■□□□ 1.62
SDF2L1-201ENST00000248958 ACOX2Q99424 681 aa25.16■■□□□ 1.62
SDF2L1-201ENST00000248958 ADAM33Q9BZ11 813 aa25.16■■□□□ 1.62
SDF2L1-201ENST00000248958 KIAA1522Q9P206 1035 aaPredicted RBP25.16■■□□□ 1.62
SDF2L1-201ENST00000248958 SMG5Q9UPR3 1016 aaKnown RBP25.16■■□□□ 1.62
SDF2L1-201ENST00000248958 LUC7L2Q9Y383 392 aaKnown RBP25.16■■□□□ 1.62
SDF2L1-201ENST00000248958 HS3ST4Q9Y661 456 aa25.16■■□□□ 1.62
SDF2L1-201ENST00000248958 STON1Q9Y6Q2 735 aa25.16■■□□□ 1.62
SDF2L1-201ENST00000248958 A0A1B0GVM2 712 aa25.15■■□□□ 1.62
SDF2L1-201ENST00000248958 TCRBV21S2A2A0A5A6 115 aa25.15■■□□□ 1.62
SDF2L1-201ENST00000248958 ANKRD62A6NC57 917 aa25.15■■□□□ 1.62
SDF2L1-201ENST00000248958 TCAF2A6NFQ2 919 aa25.15■■□□□ 1.62
SDF2L1-201ENST00000248958 H0Y626 953 aa25.15■■□□□ 1.62
SDF2L1-201ENST00000248958 MOCS3O95396 460 aa25.15■■□□□ 1.62
SDF2L1-201ENST00000248958 ADCY5O95622 1261 aa25.15■■□□□ 1.62
SDF2L1-201ENST00000248958 POLR2EP19388 210 aaKnown RBP25.15■■□□□ 1.62
SDF2L1-201ENST00000248958 SLC12A1Q13621 1099 aa25.15■■□□□ 1.62
SDF2L1-201ENST00000248958 TRIM14Q14142 442 aa25.15■■□□□ 1.62
SDF2L1-201ENST00000248958 STARD3Q14849 445 aa25.15■■□□□ 1.62
SDF2L1-201ENST00000248958 C5orf22Q49AR2 442 aa25.15■■□□□ 1.62
SDF2L1-201ENST00000248958 USP39Q53GS9 565 aaKnown RBP25.15■■□□□ 1.62
SDF2L1-201ENST00000248958 E4F1Q66K89 784 aaPredicted RBP25.15■■□□□ 1.62
SDF2L1-201ENST00000248958 TMEM215Q68D42 235 aa25.15■■□□□ 1.62
SDF2L1-201ENST00000248958 FBXL22Q6P050 247 aa25.15■■□□□ 1.62
SDF2L1-201ENST00000248958 DNAJC24Q6P3W2 148 aa25.15■■□□□ 1.62
SDF2L1-201ENST00000248958 PHLDB2Q86SQ0 1253 aa25.15■■□□□ 1.62
SDF2L1-201ENST00000248958 ADIPOR2Q86V24 386 aa25.15■■□□□ 1.62
SDF2L1-201ENST00000248958 VPS36Q86VN1 386 aa25.15■■□□□ 1.62
SDF2L1-201ENST00000248958 RNF214Q8ND24 703 aa25.15■■□□□ 1.62
SDF2L1-201ENST00000248958 JOSD2Q8TAC2 188 aa25.15■■□□□ 1.62
SDF2L1-201ENST00000248958 WFDC5Q8TCV5 224 aa25.15■■□□□ 1.62
SDF2L1-201ENST00000248958 MYEOVQ96EZ4 313 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms