RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 NETO1Q8TDF5 533 aa21.92■■□□□ 1.1
HCFC1R1-201ENST00000248089 TCEAL3Q969E4 200 aa21.92■■□□□ 1.1
HCFC1R1-201ENST00000248089 IRX2Q9BZI1 471 aaPredicted RBP21.92■■□□□ 1.1
HCFC1R1-201ENST00000248089 NLRC4Q9NPP4 1024 aa21.92■■□□□ 1.1
HCFC1R1-201ENST00000248089 VPS45Q9NRW7 570 aa21.92■■□□□ 1.1
HCFC1R1-201ENST00000248089 TIMM44O43615 452 aa21.91■■□□□ 1.1
HCFC1R1-201ENST00000248089 DAB1O75553 588 aa21.91■■□□□ 1.1
HCFC1R1-201ENST00000248089 CD70P32970 193 aa21.91■■□□□ 1.1
HCFC1R1-201ENST00000248089 RPL6Q02878 288 aaKnown RBP21.91■■□□□ 1.1
HCFC1R1-201ENST00000248089 NME3Q13232 169 aa21.91■■□□□ 1.1
HCFC1R1-201ENST00000248089 CDH18Q13634 790 aa21.91■■□□□ 1.1
HCFC1R1-201ENST00000248089 SYCP1Q15431 976 aa21.91■■□□□ 1.1
HCFC1R1-201ENST00000248089 PLA2G2CQ5R387 149 aa21.91■■□□□ 1.1
HCFC1R1-201ENST00000248089 CACUL1Q86Y37 369 aa21.91■■□□□ 1.1
HCFC1R1-201ENST00000248089 CCDC117Q8IWD4 279 aaPredicted RBP21.91■■□□□ 1.1
HCFC1R1-201ENST00000248089 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.91■■□□□ 1.1
HCFC1R1-201ENST00000248089 ATP6V0D2Q8N8Y2 350 aa21.91■■□□□ 1.1
HCFC1R1-201ENST00000248089 BTN2A3PQ96KV6 586 aa21.91■■□□□ 1.1
HCFC1R1-201ENST00000248089 MRGPRX1Q96LB2 322 aa21.91■■□□□ 1.1
HCFC1R1-201ENST00000248089 CD93Q9NPY3 652 aa21.91■■□□□ 1.1
HCFC1R1-201ENST00000248089 LIMA1Q9UHB6 759 aaKnown RBP21.91■■□□□ 1.1
HCFC1R1-201ENST00000248089 CACNA1AO00555 2505 aa21.91■■□□□ 1.1
HCFC1R1-201ENST00000248089 LGALS16A8MUM7 142 aa21.9■■□□□ 1.1
HCFC1R1-201ENST00000248089 EPHB6O15197 1021 aa21.9■■□□□ 1.1
HCFC1R1-201ENST00000248089 EPHX1P07099 455 aa21.9■■□□□ 1.1
HCFC1R1-201ENST00000248089 MMEP08473 750 aa21.9■■□□□ 1.1
HCFC1R1-201ENST00000248089 HLA-EP13747 358 aa21.9■■□□□ 1.1
HCFC1R1-201ENST00000248089 TACR2P21452 398 aa21.9■■□□□ 1.1
HCFC1R1-201ENST00000248089 CDH5P33151 784 aaPredicted RBP21.9■■□□□ 1.1
HCFC1R1-201ENST00000248089 RNASE9P60153 205 aaKnown RBP21.9■■□□□ 1.1
HCFC1R1-201ENST00000248089 ENPP2Q13822 863 aa21.9■■□□□ 1.1
HCFC1R1-201ENST00000248089 ANO6Q4KMQ2 910 aa21.9■■□□□ 1.1
HCFC1R1-201ENST00000248089 MBLAC2Q68D91 279 aa21.9■■□□□ 1.1
HCFC1R1-201ENST00000248089 CAVIN1Q6NZI2 390 aaKnown RBP21.9■■□□□ 1.1
HCFC1R1-201ENST00000248089 SLC26A9Q7LBE3 791 aa21.9■■□□□ 1.1
HCFC1R1-201ENST00000248089 ERMP1Q7Z2K6 904 aa21.9■■□□□ 1.1
HCFC1R1-201ENST00000248089 ADIPOR2Q86V24 386 aa21.9■■□□□ 1.1
HCFC1R1-201ENST00000248089 ERICH1Q86X53 443 aa21.9■■□□□ 1.1
HCFC1R1-201ENST00000248089 DEFB119Q8N690 84 aa21.9■■□□□ 1.1
HCFC1R1-201ENST00000248089 ZNF557Q8N988 423 aaPredicted RBP21.9■■□□□ 1.1
HCFC1R1-201ENST00000248089 EPS8L1Q8TE68 723 aa21.9■■□□□ 1.1
HCFC1R1-201ENST00000248089 DDX1Q92499 740 aaKnown RBP21.9■■□□□ 1.1
HCFC1R1-201ENST00000248089 PIGKQ92643 395 aa21.9■■□□□ 1.1
HCFC1R1-201ENST00000248089 SPAG5Q96R06 1193 aa21.9■■□□□ 1.1
HCFC1R1-201ENST00000248089 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.9■■□□□ 1.1
HCFC1R1-201ENST00000248089 SLC12A6Q9UHW9 1150 aa21.9■■□□□ 1.1
HCFC1R1-201ENST00000248089 PLA2G4CQ9UP65 541 aa21.9■■□□□ 1.1
HCFC1R1-201ENST00000248089 SIK3Q9Y2K2 1263 aa21.9■■□□□ 1.1
HCFC1R1-201ENST00000248089 NYNRINQ9P2P1 1898 aaKnown RBP21.9■■□□□ 1.1
HCFC1R1-201ENST00000248089 ATXN2Q99700 1313 aaKnown RBP21.89■■□□□ 1.1
HCFC1R1-201ENST00000248089 IGHV1OR15-9A0A0B4J2B8 117 aa21.89■■□□□ 1.09
HCFC1R1-201ENST00000248089 F5H5T6 163 aa21.89■■□□□ 1.09
HCFC1R1-201ENST00000248089 ZNF217O75362 1048 aa21.89■■□□□ 1.09
HCFC1R1-201ENST00000248089 LSM8O95777 96 aaKnown RBP21.89■■□□□ 1.09
HCFC1R1-201ENST00000248089 POLR2EP19388 210 aaKnown RBP21.89■■□□□ 1.09
HCFC1R1-201ENST00000248089 ABCB4P21439 1286 aa21.89■■□□□ 1.09
HCFC1R1-201ENST00000248089 CCR1P32246 355 aa21.89■■□□□ 1.09
HCFC1R1-201ENST00000248089 PTGER3P43115 390 aa21.89■■□□□ 1.09
HCFC1R1-201ENST00000248089 ATXN1P54253 815 aaKnown RBP21.89■■□□□ 1.09
HCFC1R1-201ENST00000248089 UBXN1Q04323 297 aa21.89■■□□□ 1.09
HCFC1R1-201ENST00000248089 LMAN2Q12907 356 aa21.89■■□□□ 1.09
HCFC1R1-201ENST00000248089 NCAPHQ15003 741 aa21.89■■□□□ 1.09
HCFC1R1-201ENST00000248089 C2CD6Q53TS8 623 aa21.89■■□□□ 1.09
HCFC1R1-201ENST00000248089 FAM102AQ5T9C2 384 aaPredicted RBP21.89■■□□□ 1.09
HCFC1R1-201ENST00000248089 NAA35Q5VZE5 725 aa21.89■■□□□ 1.09
HCFC1R1-201ENST00000248089 RNF43Q68DV7 783 aa21.89■■□□□ 1.09
HCFC1R1-201ENST00000248089 SLC36A4Q6YBV0 504 aa21.89■■□□□ 1.09
HCFC1R1-201ENST00000248089 ZDHHC17Q8IUH5 632 aa21.89■■□□□ 1.09
HCFC1R1-201ENST00000248089 ZNF366Q8N895 744 aa21.89■■□□□ 1.09
HCFC1R1-201ENST00000248089 MSANTD4Q8NCY6 345 aa21.89■■□□□ 1.09
HCFC1R1-201ENST00000248089 SLC20A1Q8WUM9 679 aa21.89■■□□□ 1.09
HCFC1R1-201ENST00000248089 C18orf8Q96DM3 657 aa21.89■■□□□ 1.09
HCFC1R1-201ENST00000248089 NAT10Q9H0A0 1025 aaKnown RBP21.89■■□□□ 1.09
HCFC1R1-201ENST00000248089 PRDM16Q9HAZ2 1276 aa21.89■■□□□ 1.09
HCFC1R1-201ENST00000248089 RXFP3Q9NSD7 469 aa21.89■■□□□ 1.09
HCFC1R1-201ENST00000248089 KCNU1A8MYU2 1149 aa21.88■■□□□ 1.09
HCFC1R1-201ENST00000248089 M0QYT0 321 aa21.88■■□□□ 1.09
HCFC1R1-201ENST00000248089 AP5Z1O43299 807 aa21.88■■□□□ 1.09
HCFC1R1-201ENST00000248089 LUC7L3O95232 432 aaKnown RBP21.88■■□□□ 1.09
HCFC1R1-201ENST00000248089 ATP5BP06576 529 aaKnown RBP21.88■■□□□ 1.09
HCFC1R1-201ENST00000248089 SLC2A3P11169 496 aa21.88■■□□□ 1.09
HCFC1R1-201ENST00000248089 ZNF18P17022 549 aa21.88■■□□□ 1.09
HCFC1R1-201ENST00000248089 NOS2P35228 1153 aa21.88■■□□□ 1.09
HCFC1R1-201ENST00000248089 SOX5P35711 763 aa21.88■■□□□ 1.09
HCFC1R1-201ENST00000248089 LYSMD4Q5XG99 296 aa21.88■■□□□ 1.09
HCFC1R1-201ENST00000248089 KIAA0907Q7Z7F0 614 aaPredicted RBP21.88■■□□□ 1.09
HCFC1R1-201ENST00000248089 NEK11Q8NG66 645 aa21.88■■□□□ 1.09
HCFC1R1-201ENST00000248089 FIBINQ8TAL6 211 aa21.88■■□□□ 1.09
HCFC1R1-201ENST00000248089 CPA5Q8WXQ8 436 aa21.88■■□□□ 1.09
HCFC1R1-201ENST00000248089 RTKNQ9BST9 563 aa21.88■■□□□ 1.09
HCFC1R1-201ENST00000248089 MKRN2Q9H000 416 aaKnown RBP21.88■■□□□ 1.09
HCFC1R1-201ENST00000248089 GON4LQ3T8J9 2241 aa21.88■■□□□ 1.09
HCFC1R1-201ENST00000248089 PI4KAP42356 2102 aa21.88■■□□□ 1.09
HCFC1R1-201ENST00000248089 H0Y626 953 aa21.87■■□□□ 1.09
HCFC1R1-201ENST00000248089 GOLGA8SH3BPF8 625 aa21.87■■□□□ 1.09
HCFC1R1-201ENST00000248089 DLDP09622 509 aaKnown RBP21.87■■□□□ 1.09
HCFC1R1-201ENST00000248089 ATP1A3P13637 1013 aa21.87■■□□□ 1.09
HCFC1R1-201ENST00000248089 SULT1E1P49888 294 aa21.87■■□□□ 1.09
HCFC1R1-201ENST00000248089 JAM2P57087 298 aa21.87■■□□□ 1.09
HCFC1R1-201ENST00000248089 NOMO3P69849 1222 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms