RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 MAVSQ7Z434 540 aa17.32■□□□□ 0.36
SGPP1-201ENST00000247225 MAPK15Q8TD08 544 aa17.32■□□□□ 0.36
SGPP1-201ENST00000247225 KLK14Q9P0G3 267 aa17.32■□□□□ 0.36
SGPP1-201ENST00000247225 C15orf38-AP3S2A0A0A6YYH1 394 aa17.32■□□□□ 0.36
SGPP1-201ENST00000247225 F8W8V4 182 aa17.32■□□□□ 0.36
SGPP1-201ENST00000247225 PLIN3O60664 434 aa17.32■□□□□ 0.36
SGPP1-201ENST00000247225 FARP2O94887 1054 aaPredicted RBP17.32■□□□□ 0.36
SGPP1-201ENST00000247225 FGF3P11487 239 aaPredicted RBP17.32■□□□□ 0.36
SGPP1-201ENST00000247225 PTPRAP18433 802 aa17.32■□□□□ 0.36
SGPP1-201ENST00000247225 ITGAXP20702 1163 aa17.32■□□□□ 0.36
SGPP1-201ENST00000247225 ALDH1A3P47895 512 aa17.32■□□□□ 0.36
SGPP1-201ENST00000247225 MSLNQ13421 630 aaPredicted RBP17.32■□□□□ 0.36
SGPP1-201ENST00000247225 ART3Q13508 389 aa17.32■□□□□ 0.36
SGPP1-201ENST00000247225 FLOT2Q14254 428 aa17.32■□□□□ 0.36
SGPP1-201ENST00000247225 DCAF6Q58WW2 860 aa17.32■□□□□ 0.36
SGPP1-201ENST00000247225 ARPINQ7Z6K5 226 aa17.32■□□□□ 0.36
SGPP1-201ENST00000247225 PCDH20Q8N6Y1 951 aaKnown RBP17.32■□□□□ 0.36
SGPP1-201ENST00000247225 CMTM5Q96DZ9 223 aa17.32■□□□□ 0.36
SGPP1-201ENST00000247225 MRPL45Q9BRJ2 306 aaKnown RBP17.32■□□□□ 0.36
SGPP1-201ENST00000247225 NT5C1AQ9BXI3 368 aa17.32■□□□□ 0.36
SGPP1-201ENST00000247225 FKBP6O75344 327 aa17.32■□□□□ 0.36
SGPP1-201ENST00000247225 LTFP02788 710 aa17.32■□□□□ 0.36
SGPP1-201ENST00000247225 COX4I1P13073 169 aa17.32■□□□□ 0.36
SGPP1-201ENST00000247225 UQCRBP14927 111 aa17.32■□□□□ 0.36
SGPP1-201ENST00000247225 VAV1P15498 845 aa17.32■□□□□ 0.36
SGPP1-201ENST00000247225 PRAMEP78395 509 aa17.32■□□□□ 0.36
SGPP1-201ENST00000247225 IFRD2Q12894 506 aaPredicted RBP17.32■□□□□ 0.36
SGPP1-201ENST00000247225 TNFAIP1Q13829 316 aa17.32■□□□□ 0.36
SGPP1-201ENST00000247225 MAP7Q14244 749 aa17.32■□□□□ 0.36
SGPP1-201ENST00000247225 BOLA3Q53S33 107 aa17.32■□□□□ 0.36
SGPP1-201ENST00000247225 FBXL19Q6PCT2 694 aa17.32■□□□□ 0.36
SGPP1-201ENST00000247225 ZPBP2Q6X784 338 aa17.32■□□□□ 0.36
SGPP1-201ENST00000247225 DPEP3Q9H4B8 488 aa17.32■□□□□ 0.36
SGPP1-201ENST00000247225 CLPTM1O96005 669 aa17.31■□□□□ 0.36
SGPP1-201ENST00000247225 SERPINE1P05121 402 aa17.31■□□□□ 0.36
SGPP1-201ENST00000247225 PITX1P78337 314 aaPredicted RBP17.31■□□□□ 0.36
SGPP1-201ENST00000247225 WASHC5Q12768 1159 aa17.31■□□□□ 0.36
SGPP1-201ENST00000247225 CTU1Q7Z7A3 348 aaKnown RBP17.31■□□□□ 0.36
SGPP1-201ENST00000247225 PPWD1Q96BP3 646 aaKnown RBP17.31■□□□□ 0.36
SGPP1-201ENST00000247225 NR1H4Q96RI1 486 aaPredicted RBP17.31■□□□□ 0.36
SGPP1-201ENST00000247225 TASP1Q9H6P5 420 aa17.31■□□□□ 0.36
SGPP1-201ENST00000247225 C20orf96Q9NUD7 363 aaPredicted RBP17.31■□□□□ 0.36
SGPP1-201ENST00000247225 EMCNQ9ULC0 261 aa17.31■□□□□ 0.36
SGPP1-201ENST00000247225 DOCK5Q9H7D0 1870 aa17.31■□□□□ 0.36
SGPP1-201ENST00000247225 A0A1B0GTW7 788 aa17.31■□□□□ 0.36
SGPP1-201ENST00000247225 RNF103O00237 685 aa17.31■□□□□ 0.36
SGPP1-201ENST00000247225 ABLIM1O14639 778 aa17.31■□□□□ 0.36
SGPP1-201ENST00000247225 CILPO75339 1184 aa17.31■□□□□ 0.36
SGPP1-201ENST00000247225 SEC24DO94855 1032 aaPredicted RBP17.31■□□□□ 0.36
SGPP1-201ENST00000247225 CPOXP36551 454 aa17.31■□□□□ 0.36
SGPP1-201ENST00000247225 ARL4AP40617 200 aa17.31■□□□□ 0.36
SGPP1-201ENST00000247225 ABCE1P61221 599 aaKnown RBP17.31■□□□□ 0.36
SGPP1-201ENST00000247225 TMEM132DQ14C87 1099 aa17.31■□□□□ 0.36
SGPP1-201ENST00000247225 MBLAC2Q68D91 279 aa17.31■□□□□ 0.36
SGPP1-201ENST00000247225 CYP2R1Q6VVX0 501 aa17.31■□□□□ 0.36
SGPP1-201ENST00000247225 PDSS2Q86YH6 399 aa17.31■□□□□ 0.36
SGPP1-201ENST00000247225 CDKL3Q8IVW4 592 aaPredicted RBP17.31■□□□□ 0.36
SGPP1-201ENST00000247225 TDRD5Q8NAT2 981 aaKnown RBP17.31■□□□□ 0.36
SGPP1-201ENST00000247225 GGA3Q9NZ52 723 aa17.31■□□□□ 0.36
SGPP1-201ENST00000247225 ARHGAP26Q9UNA1 814 aa17.31■□□□□ 0.36
SGPP1-201ENST00000247225 ANKRD12Q6UB98 2062 aa17.31■□□□□ 0.36
SGPP1-201ENST00000247225 NME5P56597 212 aa17.31■□□□□ 0.36
SGPP1-201ENST00000247225 EN1Q05925 392 aaPredicted RBP17.31■□□□□ 0.36
SGPP1-201ENST00000247225 ZNF460Q14592 562 aa17.31■□□□□ 0.36
SGPP1-201ENST00000247225 IER5Q5VY09 327 aa17.31■□□□□ 0.36
SGPP1-201ENST00000247225 RPS27LQ71UM5 84 aaKnown RBP17.31■□□□□ 0.36
SGPP1-201ENST00000247225 UBR7Q8N806 425 aa17.31■□□□□ 0.36
SGPP1-201ENST00000247225 ACVR1CQ8NER5 493 aa17.31■□□□□ 0.36
SGPP1-201ENST00000247225 NAT14Q8WUY8 206 aa17.31■□□□□ 0.36
SGPP1-201ENST00000247225 OPTNQ96CV9 577 aa17.31■□□□□ 0.36
SGPP1-201ENST00000247225 RCN3Q96D15 328 aa17.31■□□□□ 0.36
SGPP1-201ENST00000247225 MFSD3Q96ES6 412 aa17.31■□□□□ 0.36
SGPP1-201ENST00000247225 PREBQ9HCU5 417 aa17.31■□□□□ 0.36
SGPP1-201ENST00000247225 PDGFCQ9NRA1 345 aa17.31■□□□□ 0.36
SGPP1-201ENST00000247225 PCDHA11Q9Y5I1 949 aa17.31■□□□□ 0.36
SGPP1-201ENST00000247225 P4HA1P13674 534 aa17.3■□□□□ 0.36
SGPP1-201ENST00000247225 AP3M2P53677 418 aa17.3■□□□□ 0.36
SGPP1-201ENST00000247225 NAGLUP54802 743 aa17.3■□□□□ 0.36
SGPP1-201ENST00000247225 HDAC4P56524 1084 aa17.3■□□□□ 0.36
SGPP1-201ENST00000247225 USP46P62068 366 aa17.3■□□□□ 0.36
SGPP1-201ENST00000247225 PCLAFQ15004 111 aa17.3■□□□□ 0.36
SGPP1-201ENST00000247225 NAPRTQ6XQN6 538 aa17.3■□□□□ 0.36
SGPP1-201ENST00000247225 HTR3CQ8WXA8 447 aa17.3■□□□□ 0.36
SGPP1-201ENST00000247225 MCRS1Q96EZ8 462 aa17.3■□□□□ 0.36
SGPP1-201ENST00000247225 NPAS2Q99743 824 aa17.3■□□□□ 0.36
SGPP1-201ENST00000247225 FETUBQ9UGM5 382 aa17.3■□□□□ 0.36
SGPP1-201ENST00000247225 LZTS1Q9Y250 596 aa17.3■□□□□ 0.36
SGPP1-201ENST00000247225 SLX4Q8IY92 1834 aa17.3■□□□□ 0.36
SGPP1-201ENST00000247225 SPDYE16A6NNV3 312 aaPredicted RBP17.3■□□□□ 0.36
SGPP1-201ENST00000247225 BUD23O43709 281 aaKnown RBP17.3■□□□□ 0.36
SGPP1-201ENST00000247225 TPST1O60507 370 aa17.3■□□□□ 0.36
SGPP1-201ENST00000247225 MAFO75444 373 aaPredicted RBP17.3■□□□□ 0.36
SGPP1-201ENST00000247225 SRGAP2BP0DMP2 458 aa17.3■□□□□ 0.36
SGPP1-201ENST00000247225 VDRP11473 427 aa17.3■□□□□ 0.36
SGPP1-201ENST00000247225 XRCC1P18887 633 aaPredicted RBP17.3■□□□□ 0.36
SGPP1-201ENST00000247225 CRABP2P29373 138 aa17.3■□□□□ 0.36
SGPP1-201ENST00000247225 PTPN7P35236 360 aa17.3■□□□□ 0.36
SGPP1-201ENST00000247225 TLR1Q15399 786 aa17.3■□□□□ 0.36
SGPP1-201ENST00000247225 TEPSINQ96N21 525 aa17.3■□□□□ 0.36
SGPP1-201ENST00000247225 TMEM134Q9H6X4 195 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms