RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 SENP6Q9GZR1 1112 aaPredicted RBP22.55■■□□□ 1.2
RNF39-201ENST00000244360 DCLRE1BQ9H816 532 aa22.55■■□□□ 1.2
RNF39-201ENST00000244360 UGT1A7Q9HAW7 530 aa22.55■■□□□ 1.2
RNF39-201ENST00000244360 UGT1A10Q9HAW8 530 aa22.55■■□□□ 1.2
RNF39-201ENST00000244360 UGT1A8Q9HAW9 530 aa22.55■■□□□ 1.2
RNF39-201ENST00000244360 CACNG4Q9UBN1 327 aa22.55■■□□□ 1.2
RNF39-201ENST00000244360 ZNF189O75820 626 aaPredicted RBP22.55■■□□□ 1.2
RNF39-201ENST00000244360 SERPINB4P48594 390 aa22.55■■□□□ 1.2
RNF39-201ENST00000244360 SERPINB9P50453 376 aa22.55■■□□□ 1.2
RNF39-201ENST00000244360 SEMA3BQ13214 749 aa22.55■■□□□ 1.2
RNF39-201ENST00000244360 KRT72Q14CN4 511 aa22.55■■□□□ 1.2
RNF39-201ENST00000244360 CDHR3Q6ZTQ4 885 aa22.55■■□□□ 1.2
RNF39-201ENST00000244360 RFX8Q6ZV50 586 aa22.55■■□□□ 1.2
RNF39-201ENST00000244360 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP22.55■■□□□ 1.2
RNF39-201ENST00000244360 COLGALT1Q8NBJ5 622 aa22.55■■□□□ 1.2
RNF39-201ENST00000244360 ZMIZ2Q8NF64 920 aa22.55■■□□□ 1.2
RNF39-201ENST00000244360 SKA1Q96BD8 255 aa22.55■■□□□ 1.2
RNF39-201ENST00000244360 BTBD10Q9BSF8 475 aa22.55■■□□□ 1.2
RNF39-201ENST00000244360 WDR6Q9NNW5 1121 aaKnown RBP22.55■■□□□ 1.2
RNF39-201ENST00000244360 CNGB3Q9NQW8 809 aa22.55■■□□□ 1.2
RNF39-201ENST00000244360 HEY2Q9UBP5 337 aa22.55■■□□□ 1.2
RNF39-201ENST00000244360 PLLPQ9Y342 182 aa22.55■■□□□ 1.2
RNF39-201ENST00000244360 PTCH2Q9Y6C5 1203 aa22.55■■□□□ 1.2
RNF39-201ENST00000244360 A0A0G2JND7 137 aa22.54■■□□□ 1.2
RNF39-201ENST00000244360 THP07101 528 aa22.54■■□□□ 1.2
RNF39-201ENST00000244360 ADRA1BP35368 520 aa22.54■■□□□ 1.2
RNF39-201ENST00000244360 WASHC5Q12768 1159 aa22.54■■□□□ 1.2
RNF39-201ENST00000244360 FAM91A1Q658Y4 838 aa22.54■■□□□ 1.2
RNF39-201ENST00000244360 PGAP3Q96FM1 320 aaPredicted RBP22.54■■□□□ 1.2
RNF39-201ENST00000244360 NSL1Q96IY1 281 aa22.54■■□□□ 1.2
RNF39-201ENST00000244360 IQCGQ9H095 443 aaKnown RBP22.54■■□□□ 1.2
RNF39-201ENST00000244360 RRAGCQ9HB90 399 aa22.54■■□□□ 1.2
RNF39-201ENST00000244360 HMX2A2RU54 273 aa22.54■■□□□ 1.2
RNF39-201ENST00000244360 EEF2KO00418 725 aaKnown RBP22.54■■□□□ 1.2
RNF39-201ENST00000244360 PPP1R12AO14974 1030 aaPredicted RBP22.54■■□□□ 1.2
RNF39-201ENST00000244360 AP1G2O75843 785 aa22.54■■□□□ 1.2
RNF39-201ENST00000244360 C6orf222P0C671 652 aaPredicted RBP22.54■■□□□ 1.2
RNF39-201ENST00000244360 NEFHP12036 1026 aa22.54■■□□□ 1.2
RNF39-201ENST00000244360 CLCNKBP51801 687 aa22.54■■□□□ 1.2
RNF39-201ENST00000244360 AFF1P51825 1210 aaKnown RBP22.54■■□□□ 1.2
RNF39-201ENST00000244360 OVGP1Q12889 678 aa22.54■■□□□ 1.2
RNF39-201ENST00000244360 NME3Q13232 169 aa22.54■■□□□ 1.2
RNF39-201ENST00000244360 TIFABQ6ZNK6 161 aa22.54■■□□□ 1.2
RNF39-201ENST00000244360 PTCD3Q96EY7 689 aaKnown RBP22.54■■□□□ 1.2
RNF39-201ENST00000244360 PCED1BQ96HM7 432 aa22.54■■□□□ 1.2
RNF39-201ENST00000244360 FERMT1Q9BQL6 677 aa22.54■■□□□ 1.2
RNF39-201ENST00000244360 DENND2DQ9H6A0 471 aaPredicted RBP22.54■■□□□ 1.2
RNF39-201ENST00000244360 ALG13Q9NP73 1137 aaKnown RBP22.54■■□□□ 1.2
RNF39-201ENST00000244360 MIOSQ9NXC5 875 aa22.54■■□□□ 1.2
RNF39-201ENST00000244360 CDH9Q9ULB4 789 aa22.54■■□□□ 1.2
RNF39-201ENST00000244360 GIT1Q9Y2X7 761 aa22.54■■□□□ 1.2
RNF39-201ENST00000244360 RAD54BQ9Y620 910 aa22.54■■□□□ 1.2
RNF39-201ENST00000244360 SYNJ2BP-COX16A0A087WUM0 186 aa22.53■■□□□ 1.2
RNF39-201ENST00000244360 YJEFN3A6XGL0 299 aa22.53■■□□□ 1.2
RNF39-201ENST00000244360 ZNF157P51786 506 aaPredicted RBP22.53■■□□□ 1.2
RNF39-201ENST00000244360 AP1B1Q10567 949 aa22.53■■□□□ 1.2
RNF39-201ENST00000244360 GPRIN1Q7Z2K8 1008 aa22.53■■□□□ 1.2
RNF39-201ENST00000244360 RSPH3Q86UC2 560 aa22.53■■□□□ 1.2
RNF39-201ENST00000244360 C3orf58Q8NDZ4 430 aa22.53■■□□□ 1.2
RNF39-201ENST00000244360 TTC17Q96AE7 1141 aa22.53■■□□□ 1.2
RNF39-201ENST00000244360 TMEM120AQ9BXJ8 343 aa22.53■■□□□ 1.2
RNF39-201ENST00000244360 PRDM12Q9H4Q4 367 aa22.53■■□□□ 1.2
RNF39-201ENST00000244360 TMEM30AQ9NV96 361 aa22.53■■□□□ 1.2
RNF39-201ENST00000244360 COX16Q9P0S2 106 aa22.53■■□□□ 1.2
RNF39-201ENST00000244360 IGSF9Q9P2J2 1179 aa22.53■■□□□ 1.2
RNF39-201ENST00000244360 MYBPHLA2RUH7 354 aa22.53■■□□□ 1.2
RNF39-201ENST00000244360 SDR42E2A6NKP2 422 aa22.53■■□□□ 1.2
RNF39-201ENST00000244360 HHLA1C9JL84 531 aa22.53■■□□□ 1.2
RNF39-201ENST00000244360 TNPO2O14787 897 aaKnown RBP22.53■■□□□ 1.2
RNF39-201ENST00000244360 CREB3O43889 395 aa22.53■■□□□ 1.2
RNF39-201ENST00000244360 CHRNA1P02708 482 aa22.53■■□□□ 1.2
RNF39-201ENST00000244360 GM2AP17900 193 aa22.53■■□□□ 1.2
RNF39-201ENST00000244360 CNTFP26441 200 aa22.53■■□□□ 1.2
RNF39-201ENST00000244360 ZBTB16Q05516 673 aa22.53■■□□□ 1.2
RNF39-201ENST00000244360 BLMHQ13867 455 aa22.53■■□□□ 1.2
RNF39-201ENST00000244360 GDF6Q6KF10 455 aaPredicted RBP22.53■■□□□ 1.2
RNF39-201ENST00000244360 MARK2Q7KZI7 788 aaKnown RBP22.53■■□□□ 1.2
RNF39-201ENST00000244360 IFNL1Q8IU54 200 aa22.53■■□□□ 1.2
RNF39-201ENST00000244360 CCNJLQ8IV13 435 aa22.53■■□□□ 1.2
RNF39-201ENST00000244360 SLC7A14Q8TBB6 771 aa22.53■■□□□ 1.2
RNF39-201ENST00000244360 KCNV2Q8TDN2 545 aa22.53■■□□□ 1.2
RNF39-201ENST00000244360 MMADHCQ9H3L0 296 aaPredicted RBP22.53■■□□□ 1.2
RNF39-201ENST00000244360 COL4A4P53420 1690 aaPredicted RBP22.52■■□□□ 1.2
RNF39-201ENST00000244360 ARL5CA6NH57 179 aa22.52■■□□□ 1.2
RNF39-201ENST00000244360 BGNP21810 368 aa22.52■■□□□ 1.2
RNF39-201ENST00000244360 RPL9P32969 192 aaKnown RBP22.52■■□□□ 1.2
RNF39-201ENST00000244360 HCAR3P49019 387 aa22.52■■□□□ 1.2
RNF39-201ENST00000244360 MGAT3Q09327 533 aa22.52■■□□□ 1.2
RNF39-201ENST00000244360 BMPR2Q13873 1038 aa22.52■■□□□ 1.2
RNF39-201ENST00000244360 C4orf50Q6ZRC1 276 aa22.52■■□□□ 1.2
RNF39-201ENST00000244360 BHLHA9Q7RTU4 235 aa22.52■■□□□ 1.2
RNF39-201ENST00000244360 MRPL10Q7Z7H8 261 aaKnown RBP22.52■■□□□ 1.2
RNF39-201ENST00000244360 SERINC5Q86VE9 423 aa22.52■■□□□ 1.2
RNF39-201ENST00000244360 PDCD7Q8N8D1 485 aaKnown RBP22.52■■□□□ 1.2
RNF39-201ENST00000244360 RRN3Q9NYV6 651 aa22.52■■□□□ 1.2
RNF39-201ENST00000244360 FBXW11Q9UKB1 542 aa22.52■■□□□ 1.2
RNF39-201ENST00000244360 WDR27A2RRH5 827 aa22.51■■□□□ 1.19
RNF39-201ENST00000244360 DLDP09622 509 aaKnown RBP22.51■■□□□ 1.19
RNF39-201ENST00000244360 CACNA2D1P54289 1103 aa22.51■■□□□ 1.19
RNF39-201ENST00000244360 NIPAL4Q0D2K0 466 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms