RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 KCNT1Q5JUK3 1230 aa8.72□□□□□ -1.01
IFT43-201ENST00000238628 CLEC20AQ6ZU45 233 aa8.72□□□□□ -1.01
IFT43-201ENST00000238628 USP53Q70EK8 1073 aa8.72□□□□□ -1.01
IFT43-201ENST00000238628 GPRIN1Q7Z2K8 1008 aa8.72□□□□□ -1.01
IFT43-201ENST00000238628 ANKS1BQ7Z6G8 1248 aa8.72□□□□□ -1.01
IFT43-201ENST00000238628 UNC93AQ86WB7 457 aa8.72□□□□□ -1.01
IFT43-201ENST00000238628 CACUL1Q86Y37 369 aa8.72□□□□□ -1.01
IFT43-201ENST00000238628 PARD3BQ8TEW8 1205 aa8.72□□□□□ -1.01
IFT43-201ENST00000238628 CYFIP2Q96F07 1278 aa8.72□□□□□ -1.01
IFT43-201ENST00000238628 P2RY11Q96G91 374 aa8.72□□□□□ -1.01
IFT43-201ENST00000238628 PIWIL1Q96J94 861 aaKnown RBP8.72□□□□□ -1.01
IFT43-201ENST00000238628 USP28Q96RU2 1077 aa8.72□□□□□ -1.01
IFT43-201ENST00000238628 SEMA3CQ99985 751 aa8.72□□□□□ -1.01
IFT43-201ENST00000238628 DCLK3Q9C098 648 aa8.72□□□□□ -1.01
IFT43-201ENST00000238628 CIPCQ9C0C6 399 aa8.72□□□□□ -1.01
IFT43-201ENST00000238628 PCED1AQ9H1Q7 454 aa8.72□□□□□ -1.01
IFT43-201ENST00000238628 C6orf106Q9H6K1 298 aaPredicted RBP8.72□□□□□ -1.01
IFT43-201ENST00000238628 POLR1BQ9H9Y6 1135 aa8.72□□□□□ -1.01
IFT43-201ENST00000238628 CGNQ9P2M7 1197 aaKnown RBP8.72□□□□□ -1.01
IFT43-201ENST00000238628 TFIP11Q9UBB9 837 aaKnown RBP8.72□□□□□ -1.01
IFT43-201ENST00000238628 NAGPAQ9UK23 515 aa8.72□□□□□ -1.01
IFT43-201ENST00000238628 CLEC4EQ9ULY5 219 aa8.72□□□□□ -1.01
IFT43-201ENST00000238628 PCDHA5Q9Y5H7 936 aa8.72□□□□□ -1.01
IFT43-201ENST00000238628 TP53BP1Q12888 1972 aaPredicted RBP8.72□□□□□ -1.01
IFT43-201ENST00000238628 LRRIQ3A6PVS8 624 aaPredicted RBP8.71□□□□□ -1.02
IFT43-201ENST00000238628 KIF20AO95235 890 aa8.71□□□□□ -1.02
IFT43-201ENST00000238628 VNN1O95497 513 aa8.71□□□□□ -1.02
IFT43-201ENST00000238628 RPN1P04843 607 aaKnown RBP8.71□□□□□ -1.02
IFT43-201ENST00000238628 PRKCHP24723 683 aa8.71□□□□□ -1.02
IFT43-201ENST00000238628 RBMS1P29558 406 aaKnown RBP8.71□□□□□ -1.02
IFT43-201ENST00000238628 ACSL1P33121 698 aa8.71□□□□□ -1.02
IFT43-201ENST00000238628 E2F1Q01094 437 aa8.71□□□□□ -1.02
IFT43-201ENST00000238628 EFEMP1Q12805 493 aa8.71□□□□□ -1.02
IFT43-201ENST00000238628 NCAPHQ15003 741 aa8.71□□□□□ -1.02
IFT43-201ENST00000238628 EIF4HQ15056 248 aaKnown RBP8.71□□□□□ -1.02
IFT43-201ENST00000238628 STK38Q15208 465 aa8.71□□□□□ -1.02
IFT43-201ENST00000238628 E2F4Q16254 413 aa8.71□□□□□ -1.02
IFT43-201ENST00000238628 ERICH6BQ5W0A0 696 aa8.71□□□□□ -1.02
IFT43-201ENST00000238628 SERPINA13PQ6UXR4 307 aa8.71□□□□□ -1.02
IFT43-201ENST00000238628 UNC13DQ70J99 1090 aa8.71□□□□□ -1.02
IFT43-201ENST00000238628 SCD5Q86SK9 330 aa8.71□□□□□ -1.02
IFT43-201ENST00000238628 DENND1CQ8IV53 801 aa8.71□□□□□ -1.02
IFT43-201ENST00000238628 C12orf56Q8IXR9 622 aa8.71□□□□□ -1.02
IFT43-201ENST00000238628 ZNF276Q8N554 614 aa8.71□□□□□ -1.02
IFT43-201ENST00000238628 OR2T3Q8NH03 318 aa8.71□□□□□ -1.02
IFT43-201ENST00000238628 PLEKHO2Q8TD55 490 aa8.71□□□□□ -1.02
IFT43-201ENST00000238628 DDI1Q8WTU0 396 aa8.71□□□□□ -1.02
IFT43-201ENST00000238628 SORCS1Q8WY21 1168 aa8.71□□□□□ -1.02
IFT43-201ENST00000238628 TAF4BQ92750 862 aa8.71□□□□□ -1.02
IFT43-201ENST00000238628 DHX58Q96C10 678 aa8.71□□□□□ -1.02
IFT43-201ENST00000238628 CCNL2Q96S94 520 aaPredicted RBP8.71□□□□□ -1.02
IFT43-201ENST00000238628 CDK5RAP1Q96SZ6 601 aaKnown RBP8.71□□□□□ -1.02
IFT43-201ENST00000238628 ELF4Q99607 663 aaPredicted RBP8.71□□□□□ -1.02
IFT43-201ENST00000238628 C7orf25Q9BPX7 421 aa8.71□□□□□ -1.02
IFT43-201ENST00000238628 EPN3Q9H201 632 aa8.71□□□□□ -1.02
IFT43-201ENST00000238628 LHX5Q9H2C1 402 aa8.71□□□□□ -1.02
IFT43-201ENST00000238628 CUEDC2Q9H467 287 aa8.71□□□□□ -1.02
IFT43-201ENST00000238628 SLC39A2Q9NP94 309 aa8.71□□□□□ -1.02
IFT43-201ENST00000238628 OSGEPQ9NPF4 335 aa8.71□□□□□ -1.02
IFT43-201ENST00000238628 ASCL3Q9NQ33 180 aa8.71□□□□□ -1.02
IFT43-201ENST00000238628 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.71□□□□□ -1.02
IFT43-201ENST00000238628 HMGXB4Q9UGU5 601 aa8.71□□□□□ -1.02
IFT43-201ENST00000238628 RASAL2Q9UJF2 1139 aa8.71□□□□□ -1.02
IFT43-201ENST00000238628 AGO1Q9UL18 857 aaKnown RBP8.71□□□□□ -1.02
IFT43-201ENST00000238628 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.71□□□□□ -1.02
IFT43-201ENST00000238628 UBE4BO95155 1302 aa8.71□□□□□ -1.02
IFT43-201ENST00000238628 ITPR2Q14571 2701 aa8.71□□□□□ -1.02
IFT43-201ENST00000238628 STX6O43752 255 aa8.7□□□□□ -1.02
IFT43-201ENST00000238628 FSBPO95073 299 aa8.7□□□□□ -1.02
IFT43-201ENST00000238628 SEMA4FO95754 770 aa8.7□□□□□ -1.02
IFT43-201ENST00000238628 ITGB2P05107 769 aa8.7□□□□□ -1.02
IFT43-201ENST00000238628 TNFRSF8P28908 595 aa8.7□□□□□ -1.02
IFT43-201ENST00000238628 CORO1AP31146 461 aaKnown RBP8.7□□□□□ -1.02
IFT43-201ENST00000238628 KIF11P52732 1056 aa8.7□□□□□ -1.02
IFT43-201ENST00000238628 DLG4P78352 724 aa8.7□□□□□ -1.02
IFT43-201ENST00000238628 CLDN10P78369 228 aa8.7□□□□□ -1.02
IFT43-201ENST00000238628 KNOP1Q1ED39 458 aaKnown RBP8.7□□□□□ -1.02
IFT43-201ENST00000238628 SKIDA1Q1XH10 827 aa8.7□□□□□ -1.02
IFT43-201ENST00000238628 TMEM215Q68D42 235 aa8.7□□□□□ -1.02
IFT43-201ENST00000238628 CNNM4Q6P4Q7 775 aa8.7□□□□□ -1.02
IFT43-201ENST00000238628 PTRH1Q86Y79 214 aaKnown RBP8.7□□□□□ -1.02
IFT43-201ENST00000238628 CPXM2Q8N436 756 aa8.7□□□□□ -1.02
IFT43-201ENST00000238628 IQUBQ8NA54 791 aa8.7□□□□□ -1.02
IFT43-201ENST00000238628 RBBP8NLQ8NC74 664 aaPredicted RBP8.7□□□□□ -1.02
IFT43-201ENST00000238628 SAP25Q8TEE9 199 aa8.7□□□□□ -1.02
IFT43-201ENST00000238628 BIRC7Q96CA5 298 aa8.7□□□□□ -1.02
IFT43-201ENST00000238628 ACE2Q9BYF1 805 aaPredicted RBP8.7□□□□□ -1.02
IFT43-201ENST00000238628 SLC2A11Q9BYW1 496 aa8.7□□□□□ -1.02
IFT43-201ENST00000238628 BTBD1Q9H0C5 482 aa8.7□□□□□ -1.02
IFT43-201ENST00000238628 SLC25A18Q9H1K4 315 aa8.7□□□□□ -1.02
IFT43-201ENST00000238628 BLZF1Q9H2G9 400 aa8.7□□□□□ -1.02
IFT43-201ENST00000238628 ZNF768Q9H5H4 540 aaKnown RBP8.7□□□□□ -1.02
IFT43-201ENST00000238628 PNPLA8Q9NP80 782 aa8.7□□□□□ -1.02
IFT43-201ENST00000238628 CLIC5Q9NZA1 410 aa8.7□□□□□ -1.02
IFT43-201ENST00000238628 PLA2G4CQ9UP65 541 aa8.7□□□□□ -1.02
IFT43-201ENST00000238628 MORC2Q9Y6X9 1032 aaPredicted RBP8.7□□□□□ -1.02
IFT43-201ENST00000238628 PLXNA2O75051 1894 aa8.69□□□□□ -1.02
IFT43-201ENST00000238628 SLC12A8A0AV02 714 aa8.69□□□□□ -1.02
IFT43-201ENST00000238628 TSPAN3O60637 253 aa8.69□□□□□ -1.02
IFT43-201ENST00000238628 GJB6O95452 261 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms