RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 EPC2Q52LR7 807 aa8.4□□□□□ -1.07
APOB-201ENST00000233242 ZSCAN18Q8TBC5 510 aaPredicted RBP8.4□□□□□ -1.07
APOB-201ENST00000233242 KATNAL1Q9BW62 490 aa8.4□□□□□ -1.07
APOB-201ENST00000233242 ACSS3Q9H6R3 686 aa8.4□□□□□ -1.07
APOB-201ENST00000233242 LRRC19Q9H756 370 aa8.4□□□□□ -1.07
APOB-201ENST00000233242 PNPLA8Q9NP80 782 aa8.4□□□□□ -1.07
APOB-201ENST00000233242 ITGA11Q9UKX5 1188 aa8.4□□□□□ -1.07
APOB-201ENST00000233242 TNS3Q68CZ2 1445 aa8.4□□□□□ -1.07
APOB-201ENST00000233242 BCAP31P51572 246 aa8.4□□□□□ -1.07
APOB-201ENST00000233242 TUBA3CQ13748 450 aa8.4□□□□□ -1.07
APOB-201ENST00000233242 NR6A1Q15406 480 aa8.4□□□□□ -1.07
APOB-201ENST00000233242 MYO1HQ8N1T3 1032 aa8.4□□□□□ -1.07
APOB-201ENST00000233242 OR56A4Q8NGH8 313 aa8.4□□□□□ -1.07
APOB-201ENST00000233242 RDH11Q8TC12 318 aa8.4□□□□□ -1.07
APOB-201ENST00000233242 SLC20A1Q8WUM9 679 aa8.4□□□□□ -1.07
APOB-201ENST00000233242 REEP1Q9H902 201 aa8.4□□□□□ -1.07
APOB-201ENST00000233242 CHORDC1Q9UHD1 332 aaPredicted RBP8.4□□□□□ -1.07
APOB-201ENST00000233242 A0A087X1B8 175 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 LSM1O15116 133 aaKnown RBP8.39□□□□□ -1.07
APOB-201ENST00000233242 FARP2O94887 1054 aaPredicted RBP8.39□□□□□ -1.07
APOB-201ENST00000233242 FASTKD5Q7L8L6 764 aaKnown RBP8.39□□□□□ -1.07
APOB-201ENST00000233242 PSMA8Q8TAA3 256 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 RTKNQ9BST9 563 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 TMEM216Q9P0N5 145 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 CNTRLQ7Z7A1 2325 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 MGAT4DA6NG13 374 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 H3BMM5 538 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 HAT1O14929 419 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 MTRF1O75570 445 aaKnown RBP8.39□□□□□ -1.07
APOB-201ENST00000233242 POU1F1P28069 291 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 CCNG1P51959 295 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 CDC42P60953 191 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 CYP24A1Q07973 514 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 PACS1Q6VY07 963 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 KDELC2Q7Z4H8 507 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 ELOVL6Q9H5J4 265 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 CYP27B1O15528 508 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 MGRN1O60291 552 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 ALOX15P16050 662 aaPredicted RBP8.39□□□□□ -1.07
APOB-201ENST00000233242 RASA1P20936 1047 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 SLC16A1P53985 500 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 PCSK7Q16549 785 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 TEX13BQ9BXU2 312 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 ARMC7Q9H6L4 198 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 LIMD1Q9UGP4 676 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 ASTN2O75129 1339 aaPredicted RBP8.39□□□□□ -1.07
APOB-201ENST00000233242 A0A096LPK6 155 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 MTM1Q13496 603 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 PKN1Q16512 942 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 RUNDC3AQ59EK9 446 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 SLFN11Q7Z7L1 901 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 PQLC1Q8N2U9 271 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 PI4K2AQ9BTU6 479 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 JMJD4Q9H9V9 463 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 PDGFCQ9NRA1 345 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 RPS6KA6Q9UK32 745 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 TPD52L2O43399 206 aaKnown RBP8.39□□□□□ -1.07
APOB-201ENST00000233242 PMPCBO75439 489 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 ETFBP38117 255 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 BCAT1P54687 386 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 PPIL2Q13356 520 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 ZDHHC17Q8IUH5 632 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 PNPT1Q8TCS8 783 aaKnown RBP8.39□□□□□ -1.07
APOB-201ENST00000233242 CRLS1Q9UJA2 301 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 UBE2QL1A1L167 161 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 PLK4O00444 970 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 ENPEPQ07075 957 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 ZNF720Q7Z2F6 126 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 ZNF276Q8N554 614 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 KIAA0895Q8NCT3 520 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 SLC5A5Q92911 643 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 TMEM143Q96AN5 459 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 CINPQ9BW66 212 aaPredicted RBP8.39□□□□□ -1.07
APOB-201ENST00000233242 RNF17Q9BXT8 1623 aaKnown RBP8.39□□□□□ -1.07
APOB-201ENST00000233242 SYNDIG1LA6NDD5 238 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 TGDSO95455 350 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 FAAP100Q0VG06 881 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 ARHGEF7Q14155 803 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 ZNF268Q14587 947 aaPredicted RBP8.39□□□□□ -1.07
APOB-201ENST00000233242 NFIL3Q16649 462 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 DUPD1Q68J44 220 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 ITFG2Q969R8 447 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 IL25Q9H293 177 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 LSM7Q9UK45 103 aaKnown RBP8.39□□□□□ -1.07
APOB-201ENST00000233242 ABCA9Q8IUA7 1624 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 FAM187BQ17R55 369 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 DENND6AQ8IWF6 608 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 LMTK3Q96Q04 1460 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 GLP2RO95838 553 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 EPHX4Q8IUS5 362 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 EMC1Q8N766 993 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 GPRASP2Q96D09 838 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 MTG1Q9BT17 334 aaPredicted RBP8.39□□□□□ -1.07
APOB-201ENST00000233242 DPY30Q9C005 99 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 NUDT5Q9UKK9 219 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 PSME3P61289 254 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 BMPR2Q13873 1038 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 CCDC157Q569K6 752 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 ZRANB3Q5FWF4 1079 aa8.39□□□□□ -1.07
APOB-201ENST00000233242 SIX5Q8N196 739 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms