RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 CCDC166P0CW27 439 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 CSH1P0DML2 217 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 CSH2P0DML3 217 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 FGF3P11487 239 aaPredicted RBP16.37■□□□□ 0.21
SF3A2-201ENST00000221494 FDFT1P37268 417 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 SLC1A6P48664 564 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 AQP4P55087 323 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 MTTPP55157 894 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 DEFB115Q30KQ5 88 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 ZBTB41Q5SVQ8 909 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 IER5Q5VY09 327 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 RNF111Q6ZNA4 994 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 KLHL23Q8NBE8 558 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 OR6J1Q8NGC5 347 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 DDI1Q8WTU0 396 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 TRAPPC12Q8WVT3 735 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 PRPF31Q8WWY3 499 aaKnown RBP16.37■□□□□ 0.21
SF3A2-201ENST00000221494 PYDC1Q8WXC3 89 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 ZBTB45Q96K62 511 aaPredicted RBP16.37■□□□□ 0.21
SF3A2-201ENST00000221494 CAPNS2Q96L46 248 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 TBCBQ99426 244 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 LBHD1Q9BQE6 289 aaPredicted RBP16.37■□□□□ 0.21
SF3A2-201ENST00000221494 EBF4Q9BQW3 602 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 RTKNQ9BST9 563 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 ZNF696Q9H7X3 374 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 SMYD2Q9NRG4 433 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 MOCS1Q9NZB8 636 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 VPS28Q9UK41 221 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 ARHGAP26Q9UNA1 814 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 DNAJC16Q9Y2G8 782 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 ANK1P16157 1881 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 C15orf38-AP3S2A0A0A6YYH1 394 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 CCDC195A0A1B0GUA6 201 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 GAS2O43903 313 aaKnown RBP16.37■□□□□ 0.21
SF3A2-201ENST00000221494 ADCY3O60266 1144 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 TOM1L1O75674 476 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 ZBED1O96006 694 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 CST3P01034 146 aaPredicted RBP16.37■□□□□ 0.21
SF3A2-201ENST00000221494 ZNF286BP0CG31 522 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 SMIM18P0DKX4 95 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 MLNP12872 115 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 HARS2P49590 506 aaKnown RBP16.37■□□□□ 0.21
SF3A2-201ENST00000221494 SLC25A3Q00325 362 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 CAPSQ13938 189 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 TRIP10Q15642 601 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 ZNF699Q32M78 642 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 FAXCQ5TGI0 409 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 KLC3Q6P597 504 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 ARPINQ7Z6K5 226 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 ADGRF2Q8IZF7 708 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 HSPH1Q92598 858 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 SIGLEC10Q96LC7 697 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 SERPINI1Q99574 410 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 BCO2Q9BYV7 579 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 ARHGAP39Q9C0H5 1083 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 C20orf27Q9GZN8 174 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 IRAK4Q9NWZ3 460 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 CHCHD3Q9NX63 227 aaKnown RBP16.37■□□□□ 0.21
SF3A2-201ENST00000221494 DTNAQ9Y4J8 743 aa16.37■□□□□ 0.21
SF3A2-201ENST00000221494 ARHGAP10A1A4S6 786 aa16.36■□□□□ 0.21
SF3A2-201ENST00000221494 HMX2A2RU54 273 aa16.36■□□□□ 0.21
SF3A2-201ENST00000221494 CYB561D2O14569 222 aa16.36■□□□□ 0.21
SF3A2-201ENST00000221494 OGTO15294 1046 aa16.36■□□□□ 0.21
SF3A2-201ENST00000221494 GCATO75600 419 aa16.36■□□□□ 0.21
SF3A2-201ENST00000221494 GSRP00390 522 aa16.36■□□□□ 0.21
SF3A2-201ENST00000221494 KITP10721 976 aa16.36■□□□□ 0.21
SF3A2-201ENST00000221494 INSRRP14616 1297 aa16.36■□□□□ 0.21
SF3A2-201ENST00000221494 CPA3P15088 417 aa16.36■□□□□ 0.21
SF3A2-201ENST00000221494 GPD1P21695 349 aa16.36■□□□□ 0.21
SF3A2-201ENST00000221494 PEX2P28328 305 aa16.36■□□□□ 0.21
SF3A2-201ENST00000221494 GRIA2P42262 883 aa16.36■□□□□ 0.21
SF3A2-201ENST00000221494 HK2P52789 917 aa16.36■□□□□ 0.21
SF3A2-201ENST00000221494 CDH6P55285 790 aa16.36■□□□□ 0.21
SF3A2-201ENST00000221494 FOLH1Q04609 750 aa16.36■□□□□ 0.21
SF3A2-201ENST00000221494 BOLA3Q53S33 107 aa16.36■□□□□ 0.21
SF3A2-201ENST00000221494 ARMC3Q5W041 872 aa16.36■□□□□ 0.21
SF3A2-201ENST00000221494 SLC9A4Q6AI14 798 aa16.36■□□□□ 0.21
SF3A2-201ENST00000221494 LRRC71Q8N4P6 559 aa16.36■□□□□ 0.21
SF3A2-201ENST00000221494 DEPDC1BQ8WUY9 529 aa16.36■□□□□ 0.21
SF3A2-201ENST00000221494 MRPL4Q9BYD3 311 aaKnown RBP16.36■□□□□ 0.21
SF3A2-201ENST00000221494 CREBZFQ9NS37 354 aa16.36■□□□□ 0.21
SF3A2-201ENST00000221494 MARCOQ9UEW3 520 aaPredicted RBP16.36■□□□□ 0.21
SF3A2-201ENST00000221494 DMTF1Q9Y222 760 aa16.36■□□□□ 0.21
SF3A2-201ENST00000221494 A6NJR5 290 aa16.35■□□□□ 0.21
SF3A2-201ENST00000221494 H3BNX3 289 aa16.35■□□□□ 0.21
SF3A2-201ENST00000221494 H3BRB1 525 aa16.35■□□□□ 0.21
SF3A2-201ENST00000221494 DPYSL4O14531 572 aa16.35■□□□□ 0.21
SF3A2-201ENST00000221494 APOL1O14791 398 aa16.35■□□□□ 0.21
SF3A2-201ENST00000221494 KCNN4O15554 427 aa16.35■□□□□ 0.21
SF3A2-201ENST00000221494 DYNC1LI2O43237 492 aaPredicted RBP16.35■□□□□ 0.21
SF3A2-201ENST00000221494 PLIN3O60664 434 aa16.35■□□□□ 0.21
SF3A2-201ENST00000221494 TNFAIP8O95379 198 aa16.35■□□□□ 0.21
SF3A2-201ENST00000221494 ITGA2BP08514 1039 aa16.35■□□□□ 0.21
SF3A2-201ENST00000221494 RAG1P15918 1043 aa16.35■□□□□ 0.21
SF3A2-201ENST00000221494 ITGAXP20702 1163 aa16.35■□□□□ 0.21
SF3A2-201ENST00000221494 IDH3AP50213 366 aa16.35■□□□□ 0.21
SF3A2-201ENST00000221494 DLG1Q12959 904 aa16.35■□□□□ 0.21
SF3A2-201ENST00000221494 ZNF484Q5JVG2 852 aa16.35■□□□□ 0.21
SF3A2-201ENST00000221494 RARS2Q5T160 578 aaKnown RBP16.35■□□□□ 0.21
SF3A2-201ENST00000221494 PDPK2PQ6A1A2 396 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms