RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 RGS7P49802 495 aa11.31□□□□□ -0.6
USP31-201ENST00000219689 MAZP56270 477 aaKnown RBP11.31□□□□□ -0.6
USP31-201ENST00000219689 CDK17Q00537 523 aa11.31□□□□□ -0.6
USP31-201ENST00000219689 PURAQ00577 322 aaKnown RBP11.31□□□□□ -0.6
USP31-201ENST00000219689 AAGABQ6PD74 315 aa11.31□□□□□ -0.6
USP31-201ENST00000219689 KCNK18Q7Z418 384 aa11.31□□□□□ -0.6
USP31-201ENST00000219689 SFRP1Q8N474 314 aa11.31□□□□□ -0.6
USP31-201ENST00000219689 ANAPC2Q9UJX6 822 aa11.31□□□□□ -0.6
USP31-201ENST00000219689 ZNF609O15014 1411 aa11.31□□□□□ -0.6
USP31-201ENST00000219689 METTL21EPA6NDL7 271 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 H7C0S8 307 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 HAT1O14929 419 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 GSC2O15499 205 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 CCNE2O96020 404 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 EIF4BP23588 611 aaKnown RBP11.3□□□□□ -0.6
USP31-201ENST00000219689 GRIK1P39086 918 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 NPTX2P47972 431 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 FAM47BQ8NA70 645 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 STARD7Q9NQZ5 370 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 VPS4AQ9UN37 437 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 SDR42E2A6NKP2 422 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 F8W810 466 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 TDP2O95551 362 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 ITGALP20701 1170 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 MINDY2Q8NBR6 621 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 POF1BQ8WVV4 589 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 SAMD9Q5K651 1589 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 PDLIM1O00151 329 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 ATP5BP06576 529 aaKnown RBP11.3□□□□□ -0.6
USP31-201ENST00000219689 CYP2C8P10632 490 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 NPR2P20594 1047 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 PDK1Q15118 436 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 CA9Q16790 459 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 ACAD10Q6JQN1 1059 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 PCDH20Q8N6Y1 951 aaKnown RBP11.3□□□□□ -0.6
USP31-201ENST00000219689 CLCA2Q9UQC9 943 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 TOR1BO14657 336 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 PSMD3O43242 534 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 NRP2O60462 931 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 SERPINE1P05121 402 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 NCK1P16333 377 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 FAM136AQ96C01 138 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 ZNF570Q96NI8 536 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 BARHL2Q9NY43 387 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 I3L521 148 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 ALDH4A1P30038 563 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 USP39Q53GS9 565 aaKnown RBP11.3□□□□□ -0.6
USP31-201ENST00000219689 RFWD3Q6PCD5 774 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 NOL11Q9H8H0 719 aaKnown RBP11.3□□□□□ -0.6
USP31-201ENST00000219689 FAM217BQ9NTX9 383 aaPredicted RBP11.3□□□□□ -0.6
USP31-201ENST00000219689 NINJ2Q9NZG7 142 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 MAP3K6O95382 1288 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 FYNP06241 537 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 FAM86B2P0C5J1 330 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 COX4I1P13073 169 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 TBX2Q13207 712 aaPredicted RBP11.3□□□□□ -0.6
USP31-201ENST00000219689 GLRA4Q5JXX5 417 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 ZCCHC8Q6NZY4 707 aaKnown RBP11.3□□□□□ -0.6
USP31-201ENST00000219689 AFTPHQ6ULP2 937 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 C11orf96Q7Z7L8 435 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 TRIP12Q14669 1992 aaPredicted RBP11.3□□□□□ -0.6
USP31-201ENST00000219689 DICER1Q9UPY3 1922 aaKnown RBP11.3□□□□□ -0.6
USP31-201ENST00000219689 MRC2Q9UBG0 1479 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 SLCO1B7G3V0H7 640 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 BMP3P12645 472 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 HIRAP54198 1017 aaPredicted RBP11.3□□□□□ -0.6
USP31-201ENST00000219689 CCDC28AQ8IWP9 274 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 SAMD3Q8N6K7 520 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 PIK3C3Q8NEB9 887 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 UGT2B28Q9BY64 529 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 CHST12Q9NRB3 414 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 ABCB11O95342 1321 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 BOLA2-SMG1P6H3BVE0 249 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 ARF4P18085 180 aaPredicted RBP11.3□□□□□ -0.6
USP31-201ENST00000219689 ADRA1DP25100 572 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 OR2B6P58173 313 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 CHMP1BQ7LBR1 199 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 WNK2Q9Y3S1 2297 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 KPNA5O15131 536 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 GMFBP60983 142 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 BTN3A2P78410 334 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 MYDGFQ969H8 173 aa11.3□□□□□ -0.6
USP31-201ENST00000219689 FDFT1P37268 417 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 RAD51Q06609 339 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 PDXDC2PQ6P474 469 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.29□□□□□ -0.6
USP31-201ENST00000219689 STRBPQ96SI9 672 aaKnown RBP11.29□□□□□ -0.6
USP31-201ENST00000219689 ZSCAN5BA6NJL1 495 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 A8MV72 311 aaPredicted RBP11.29□□□□□ -0.6
USP31-201ENST00000219689 TP73O15350 636 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 GSTM5P46439 218 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 XIAPP98170 497 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 DDX39BQ13838 428 aaKnown RBP11.29□□□□□ -0.6
USP31-201ENST00000219689 WDR48Q8TAF3 677 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 PHF21BQ96EK2 531 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 SLCO1B3Q9NPD5 702 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 PLA2G4CQ9UP65 541 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 PLAGL2Q9UPG8 496 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 EFR3BQ9Y2G0 817 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 USP17L15C9J2P7 530 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms