RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 Q3C1V9 767 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 CCDC153Q494R4 210 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 DPY19L2Q6NUT2 758 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 SLC30A9Q6PML9 568 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 ZNF410Q86VK4 478 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 C10orf107Q8IVU9 208 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 CRYBG2Q8N1P7 616 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 BEST2Q8NFU1 509 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 PPTC7Q8NI37 304 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 JADE3Q92613 823 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 ISL2Q96A47 359 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 CMTM5Q96DZ9 223 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 SNX27Q96L92 541 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 CPNE1Q99829 537 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 MAGEB5Q9BZ81 275 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 FAM192AQ9GZU8 254 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 S100A14Q9HCY8 104 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 TXNDC16Q9P2K2 825 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 SLC17A6Q9P2U8 582 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 COPG2Q9UBF2 871 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 ADAM28Q9UKQ2 775 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 PPM1HQ9ULR3 514 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 PSAT1Q9Y617 370 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 OTOFQ9HC10 1997 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 RALGAPA2Q2PPJ7 1873 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 MEI4A8MW99 385 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 PPEF2O14830 753 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 MFSD11O43934 449 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 LCP1P13796 627 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 GP5P40197 560 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 MATKP42679 507 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 ABCE1P61221 599 aaKnown RBP13.66□□□□□ -0.22
SRP54-201ENST00000216774 DEUP1Q05D60 604 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 PDK1Q15118 436 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 SLC25A52Q3SY17 297 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 SPANXN3Q5MJ09 141 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 GRTP1Q5TC63 336 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 MAVSQ7Z434 540 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 RASSF3Q86WH2 238 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 C7orf31Q8N865 590 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 ACTRT2Q8TDY3 377 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 OTUD5Q96G74 571 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 P2RY11Q96G91 374 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 ZMAT2Q96NC0 199 aaKnown RBP13.66□□□□□ -0.22
SRP54-201ENST00000216774 TTC1Q99614 292 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 DNAI2Q9GZS0 605 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 DPEP3Q9H4B8 488 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 MFHAS1Q9Y4C4 1052 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 MCM3APO60318 1980 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 ARHGAP42A6NI28 874 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 ZNF195O14628 629 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 BAG2O95816 211 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 RALBP11234 206 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 CCDC130P13994 396 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 TYK2P29597 1187 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 MAGEA12P43365 314 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 BAG6P46379 1132 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 SLC25A3Q00325 362 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 CDC16Q13042 620 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 HNRNPDQ14103 355 aaKnown RBP13.66□□□□□ -0.22
SRP54-201ENST00000216774 RNF220Q5VTB9 566 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 PGM2L1Q6PCE3 622 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 ERO1BQ86YB8 467 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 GPC2Q8N158 579 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 PYROXD2Q8N2H3 581 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 GSTCDQ8NEC7 633 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 SPDYE1Q8NFV5 336 aaPredicted RBP13.66□□□□□ -0.22
SRP54-201ENST00000216774 OR6Y1Q8NGX8 325 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 PPP2R3CQ969Q6 453 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 EMID1Q96A84 441 aaPredicted RBP13.66□□□□□ -0.22
SRP54-201ENST00000216774 PPP1R12CQ9BZL4 782 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 VCX3BQ9H321 246 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 PAPOLBQ9NRJ5 636 aaKnown RBP13.66□□□□□ -0.22
SRP54-201ENST00000216774 ZDHHC7Q9NXF8 308 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 IGSF9Q9P2J2 1179 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 TUBGCP4Q9UGJ1 667 aa13.66□□□□□ -0.22
SRP54-201ENST00000216774 BUD23O43709 281 aaKnown RBP13.65□□□□□ -0.22
SRP54-201ENST00000216774 LYNP07948 512 aa13.65□□□□□ -0.22
SRP54-201ENST00000216774 ADORA2BP29275 332 aa13.65□□□□□ -0.22
SRP54-201ENST00000216774 PRDX6P30041 224 aa13.65□□□□□ -0.22
SRP54-201ENST00000216774 IREB2P48200 963 aaKnown RBP13.65□□□□□ -0.22
SRP54-201ENST00000216774 FRG1Q14331 258 aaKnown RBP13.65□□□□□ -0.22
SRP54-201ENST00000216774 ARMCX2Q7L311 632 aa13.65□□□□□ -0.22
SRP54-201ENST00000216774 DHDDSQ86SQ9 333 aa13.65□□□□□ -0.22
SRP54-201ENST00000216774 CERS2Q96G23 380 aa13.65□□□□□ -0.22
SRP54-201ENST00000216774 SH3GL3Q99963 347 aa13.65□□□□□ -0.22
SRP54-201ENST00000216774 ELP3Q9H9T3 547 aa13.65□□□□□ -0.22
SRP54-201ENST00000216774 SYBUQ9NX95 663 aa13.65□□□□□ -0.22
SRP54-201ENST00000216774 TMEM216Q9P0N5 145 aa13.65□□□□□ -0.22
SRP54-201ENST00000216774 NR2E3Q9Y5X4 410 aa13.65□□□□□ -0.22
SRP54-201ENST00000216774 CDY2AQ9Y6F7 541 aa13.65□□□□□ -0.22
SRP54-201ENST00000216774 CDY1Q9Y6F8 540 aa13.65□□□□□ -0.22
SRP54-201ENST00000216774 SCN1AP35498 2009 aa13.65□□□□□ -0.22
SRP54-201ENST00000216774 CPA3P15088 417 aa13.65□□□□□ -0.22
SRP54-201ENST00000216774 PSMB4P28070 264 aa13.65□□□□□ -0.22
SRP54-201ENST00000216774 PAPOLAP51003 745 aaKnown RBP13.65□□□□□ -0.22
SRP54-201ENST00000216774 XIAPP98170 497 aa13.65□□□□□ -0.22
SRP54-201ENST00000216774 FSCBQ5H9T9 825 aa13.65□□□□□ -0.22
SRP54-201ENST00000216774 C9orf57Q5W0N0 161 aa13.65□□□□□ -0.22
SRP54-201ENST00000216774 PDPK2PQ6A1A2 396 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms