RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 ALDOAP04075 364 aaKnown RBP17.2■□□□□ 0.34
CTDP1-201ENST00000075430 CYP2F1P24903 491 aa17.2■□□□□ 0.34
CTDP1-201ENST00000075430 LSAMPQ13449 338 aa17.2■□□□□ 0.34
CTDP1-201ENST00000075430 STXBP2Q15833 593 aa17.2■□□□□ 0.34
CTDP1-201ENST00000075430 TEX44Q53QW1 395 aa17.2■□□□□ 0.34
CTDP1-201ENST00000075430 GLRA4Q5JXX5 417 aa17.2■□□□□ 0.34
CTDP1-201ENST00000075430 LRRC43Q8N309 656 aa17.2■□□□□ 0.34
CTDP1-201ENST00000075430 CDKL2Q92772 493 aa17.2■□□□□ 0.34
CTDP1-201ENST00000075430 AGAP2Q99490 1192 aa17.2■□□□□ 0.34
CTDP1-201ENST00000075430 PCDHAC1Q9H158 963 aa17.2■□□□□ 0.34
CTDP1-201ENST00000075430 USP29Q9HBJ7 922 aa17.2■□□□□ 0.34
CTDP1-201ENST00000075430 CPA3P15088 417 aa17.2■□□□□ 0.34
CTDP1-201ENST00000075430 HSP90AA5PQ58FG0 334 aa17.2■□□□□ 0.34
CTDP1-201ENST00000075430 PITRM1Q5JRX3 1037 aa17.2■□□□□ 0.34
CTDP1-201ENST00000075430 SH2D5Q6ZV89 423 aa17.2■□□□□ 0.34
CTDP1-201ENST00000075430 PID1Q7Z2X4 250 aa17.2■□□□□ 0.34
CTDP1-201ENST00000075430 MYO1HQ8N1T3 1032 aa17.2■□□□□ 0.34
CTDP1-201ENST00000075430 CCT7Q99832 543 aa17.2■□□□□ 0.34
CTDP1-201ENST00000075430 TSPAN16Q9UKR8 245 aa17.2■□□□□ 0.34
CTDP1-201ENST00000075430 SLC39A10Q9ULF5 831 aa17.2■□□□□ 0.34
CTDP1-201ENST00000075430 C9JVG2 144 aa17.2■□□□□ 0.34
CTDP1-201ENST00000075430 LTFP02788 710 aa17.2■□□□□ 0.34
CTDP1-201ENST00000075430 GNL1P36915 607 aaPredicted RBP17.2■□□□□ 0.34
CTDP1-201ENST00000075430 TMEM62Q0P6H9 643 aa17.2■□□□□ 0.34
CTDP1-201ENST00000075430 LY6KQ17RY6 165 aa17.2■□□□□ 0.34
CTDP1-201ENST00000075430 MYLK3Q32MK0 819 aa17.2■□□□□ 0.34
CTDP1-201ENST00000075430 SH2D4BQ5SQS7 431 aa17.2■□□□□ 0.34
CTDP1-201ENST00000075430 KRT80Q6KB66 452 aa17.2■□□□□ 0.34
CTDP1-201ENST00000075430 LENG1Q96BZ8 264 aaPredicted RBP17.2■□□□□ 0.34
CTDP1-201ENST00000075430 EBNA1BP2Q99848 306 aaKnown RBP17.2■□□□□ 0.34
CTDP1-201ENST00000075430 V9GYQ6 96 aa17.2■□□□□ 0.34
CTDP1-201ENST00000075430 ATP6V1G1O75348 118 aa17.19■□□□□ 0.34
CTDP1-201ENST00000075430 CRTAMO95727 393 aa17.19■□□□□ 0.34
CTDP1-201ENST00000075430 SUPT20HL2P0C7V6 817 aa17.19■□□□□ 0.34
CTDP1-201ENST00000075430 FGF3P11487 239 aaPredicted RBP17.19■□□□□ 0.34
CTDP1-201ENST00000075430 P4HA1P13674 534 aa17.19■□□□□ 0.34
CTDP1-201ENST00000075430 NDST1P52848 882 aa17.19■□□□□ 0.34
CTDP1-201ENST00000075430 SUPT20HL1Q3ZLR7 823 aa17.19■□□□□ 0.34
CTDP1-201ENST00000075430 TSHZ1Q6ZSZ6 1077 aa17.19■□□□□ 0.34
CTDP1-201ENST00000075430 BRSK2Q8IWQ3 736 aa17.19■□□□□ 0.34
CTDP1-201ENST00000075430 PORCNQ9H237 461 aa17.19■□□□□ 0.34
CTDP1-201ENST00000075430 RPF1Q9H9Y2 349 aaKnown RBP17.19■□□□□ 0.34
CTDP1-201ENST00000075430 SNX13Q9Y5W8 968 aa17.19■□□□□ 0.34
CTDP1-201ENST00000075430 TMEM233B4DJY2 109 aa17.19■□□□□ 0.34
CTDP1-201ENST00000075430 DNAJA2O60884 412 aa17.19■□□□□ 0.34
CTDP1-201ENST00000075430 TSPAN8P19075 237 aa17.19■□□□□ 0.34
CTDP1-201ENST00000075430 STAT5BP51692 787 aa17.19■□□□□ 0.34
CTDP1-201ENST00000075430 ADARP55265 1226 aaKnown RBP17.19■□□□□ 0.34
CTDP1-201ENST00000075430 RALGDSQ12967 914 aa17.19■□□□□ 0.34
CTDP1-201ENST00000075430 KLF10Q13118 480 aa17.19■□□□□ 0.34
CTDP1-201ENST00000075430 PQLC1Q8N2U9 271 aa17.19■□□□□ 0.34
CTDP1-201ENST00000075430 ZNF512Q96ME7 567 aaPredicted RBP17.19■□□□□ 0.34
CTDP1-201ENST00000075430 MRPL4Q9BYD3 311 aaKnown RBP17.19■□□□□ 0.34
CTDP1-201ENST00000075430 PLAC1Q9HBJ0 212 aa17.19■□□□□ 0.34
CTDP1-201ENST00000075430 PDE4DIPQ5VU43 2346 aa17.19■□□□□ 0.34
CTDP1-201ENST00000075430 UBR3Q6ZT12 1888 aa17.19■□□□□ 0.34
CTDP1-201ENST00000075430 MED7O43513 233 aa17.18■□□□□ 0.34
CTDP1-201ENST00000075430 ASPAP45381 313 aa17.18■□□□□ 0.34
CTDP1-201ENST00000075430 PSMD7P51665 324 aa17.18■□□□□ 0.34
CTDP1-201ENST00000075430 HDAC4P56524 1084 aa17.18■□□□□ 0.34
CTDP1-201ENST00000075430 SLC10A2Q12908 348 aaPredicted RBP17.18■□□□□ 0.34
CTDP1-201ENST00000075430 NME3Q13232 169 aa17.18■□□□□ 0.34
CTDP1-201ENST00000075430 MYBPC3Q14896 1274 aa17.18■□□□□ 0.34
CTDP1-201ENST00000075430 ITPRIPL1Q6GPH6 555 aa17.18■□□□□ 0.34
CTDP1-201ENST00000075430 FBXW8Q8N3Y1 598 aa17.18■□□□□ 0.34
CTDP1-201ENST00000075430 METTL25Q8N6Q8 603 aa17.18■□□□□ 0.34
CTDP1-201ENST00000075430 PLIN3O60664 434 aa17.18■□□□□ 0.34
CTDP1-201ENST00000075430 ASLP04424 464 aa17.18■□□□□ 0.34
CTDP1-201ENST00000075430 TPP2P29144 1249 aaPredicted RBP17.18■□□□□ 0.34
CTDP1-201ENST00000075430 NAGLUP54802 743 aa17.18■□□□□ 0.34
CTDP1-201ENST00000075430 MAP3K10Q02779 954 aa17.18■□□□□ 0.34
CTDP1-201ENST00000075430 PPIDQ08752 370 aaKnown RBP17.18■□□□□ 0.34
CTDP1-201ENST00000075430 WASHC5Q12768 1159 aa17.18■□□□□ 0.34
CTDP1-201ENST00000075430 ZNF460Q14592 562 aa17.18■□□□□ 0.34
CTDP1-201ENST00000075430 RARS2Q5T160 578 aaKnown RBP17.18■□□□□ 0.34
CTDP1-201ENST00000075430 MAP1SQ66K74 1059 aaPredicted RBP17.18■□□□□ 0.34
CTDP1-201ENST00000075430 CPNE9Q8IYJ1 553 aa17.18■□□□□ 0.34
CTDP1-201ENST00000075430 TDRD5Q8NAT2 981 aaKnown RBP17.18■□□□□ 0.34
CTDP1-201ENST00000075430 COLGALT1Q8NBJ5 622 aa17.18■□□□□ 0.34
CTDP1-201ENST00000075430 CYP4F12Q9HCS2 524 aa17.18■□□□□ 0.34
CTDP1-201ENST00000075430 PTPRAP18433 802 aa17.18■□□□□ 0.34
CTDP1-201ENST00000075430 LRRC8BQ6P9F7 803 aa17.18■□□□□ 0.34
CTDP1-201ENST00000075430 NAPRTQ6XQN6 538 aa17.18■□□□□ 0.34
CTDP1-201ENST00000075430 STRA8Q7Z7C7 330 aa17.18■□□□□ 0.34
CTDP1-201ENST00000075430 USP33Q8TEY7 942 aa17.18■□□□□ 0.34
CTDP1-201ENST00000075430 SIGLEC10Q96LC7 697 aa17.18■□□□□ 0.34
CTDP1-201ENST00000075430 TASP1Q9H6P5 420 aa17.18■□□□□ 0.34
CTDP1-201ENST00000075430 TCF7L2Q9NQB0 619 aa17.18■□□□□ 0.34
CTDP1-201ENST00000075430 CHCHD3Q9NX63 227 aaKnown RBP17.18■□□□□ 0.34
CTDP1-201ENST00000075430 SYBUQ9NX95 663 aa17.18■□□□□ 0.34
CTDP1-201ENST00000075430 ARHGEF38Q9NXL2 777 aa17.18■□□□□ 0.34
CTDP1-201ENST00000075430 SNX9Q9Y5X1 595 aa17.18■□□□□ 0.34
CTDP1-201ENST00000075430 TK2O00142 265 aa17.17■□□□□ 0.34
CTDP1-201ENST00000075430 LSM8O95777 96 aaKnown RBP17.17■□□□□ 0.34
CTDP1-201ENST00000075430 SERPINE1P05121 402 aa17.17■□□□□ 0.34
CTDP1-201ENST00000075430 TFAP2AP05549 437 aa17.17■□□□□ 0.34
CTDP1-201ENST00000075430 NAMPTP43490 491 aa17.17■□□□□ 0.34
CTDP1-201ENST00000075430 CCR3P51677 355 aa17.17■□□□□ 0.34
CTDP1-201ENST00000075430 PLK1P53350 603 aa17.17■□□□□ 0.34
CTDP1-201ENST00000075430 ABCE1P61221 599 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms