RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 TLR6Q9Y2C9 796 aa16.51■□□□□ 0.23
ERCC1-201ENST00000013807 MSRB2Q9Y3D2 182 aa16.51■□□□□ 0.23
ERCC1-201ENST00000013807 GTF3C3Q9Y5Q9 886 aa16.51■□□□□ 0.23
ERCC1-201ENST00000013807 KNTC1P50748 2209 aa16.5■□□□□ 0.23
ERCC1-201ENST00000013807 DSPP15924 2871 aaKnown RBP16.5■□□□□ 0.23
ERCC1-201ENST00000013807 M0QYV0 167 aa16.5■□□□□ 0.23
ERCC1-201ENST00000013807 ACADMP11310 421 aa16.5■□□□□ 0.23
ERCC1-201ENST00000013807 BRD2P25440 801 aaKnown RBP16.5■□□□□ 0.23
ERCC1-201ENST00000013807 ACADSBP45954 432 aa16.5■□□□□ 0.23
ERCC1-201ENST00000013807 TBX4P57082 545 aa16.5■□□□□ 0.23
ERCC1-201ENST00000013807 SIM1P81133 766 aaPredicted RBP16.5■□□□□ 0.23
ERCC1-201ENST00000013807 ARID5AQ03989 594 aa16.5■□□□□ 0.23
ERCC1-201ENST00000013807 GRIK2Q13002 908 aa16.5■□□□□ 0.23
ERCC1-201ENST00000013807 ZNF423Q2M1K9 1284 aa16.5■□□□□ 0.23
ERCC1-201ENST00000013807 MBLAC2Q68D91 279 aa16.5■□□□□ 0.23
ERCC1-201ENST00000013807 RRAGAQ7L523 313 aa16.5■□□□□ 0.23
ERCC1-201ENST00000013807 ARHGEF19Q8IW93 802 aa16.5■□□□□ 0.23
ERCC1-201ENST00000013807 OR2I1PQ8NGU4 316 aa16.5■□□□□ 0.23
ERCC1-201ENST00000013807 CLEC4CQ8WTT0 213 aa16.5■□□□□ 0.23
ERCC1-201ENST00000013807 GOLGA1Q92805 767 aa16.5■□□□□ 0.23
ERCC1-201ENST00000013807 MYO19Q96H55 970 aa16.5■□□□□ 0.23
ERCC1-201ENST00000013807 FCRL2Q96LA5 508 aaPredicted RBP16.5■□□□□ 0.23
ERCC1-201ENST00000013807 PRSS16Q9NQE7 514 aa16.5■□□□□ 0.23
ERCC1-201ENST00000013807 SUN2Q9UH99 717 aa16.5■□□□□ 0.23
ERCC1-201ENST00000013807 SPAARA0A1B0GVQ0 90 aa16.49■□□□□ 0.23
ERCC1-201ENST00000013807 MEI4A8MW99 385 aa16.49■□□□□ 0.23
ERCC1-201ENST00000013807 BCAT2O15382 392 aaPredicted RBP16.49■□□□□ 0.23
ERCC1-201ENST00000013807 CBFA2T3O75081 653 aa16.49■□□□□ 0.23
ERCC1-201ENST00000013807 HLA-EP13747 358 aa16.49■□□□□ 0.23
ERCC1-201ENST00000013807 RDXP35241 583 aaKnown RBP16.49■□□□□ 0.23
ERCC1-201ENST00000013807 FAM193AP78312 1265 aa16.49■□□□□ 0.23
ERCC1-201ENST00000013807 EIF4EBP2Q13542 120 aaPredicted RBP16.49■□□□□ 0.23
ERCC1-201ENST00000013807 NADSYN1Q6IA69 706 aa16.49■□□□□ 0.23
ERCC1-201ENST00000013807 KLHL10Q6JEL2 608 aa16.49■□□□□ 0.23
ERCC1-201ENST00000013807 RFWD3Q6PCD5 774 aa16.49■□□□□ 0.23
ERCC1-201ENST00000013807 IL27RAQ6UWB1 636 aa16.49■□□□□ 0.23
ERCC1-201ENST00000013807 ENOSF1Q7L5Y1 443 aa16.49■□□□□ 0.23
ERCC1-201ENST00000013807 RAB44Q7Z6P3 723 aaPredicted RBP16.49■□□□□ 0.23
ERCC1-201ENST00000013807 GLRX5Q86SX6 157 aa16.49■□□□□ 0.23
ERCC1-201ENST00000013807 TMEM110Q86TL2 294 aa16.49■□□□□ 0.23
ERCC1-201ENST00000013807 SCUBE3Q8IX30 993 aa16.49■□□□□ 0.23
ERCC1-201ENST00000013807 WFDC5Q8TCV5 224 aa16.49■□□□□ 0.23
ERCC1-201ENST00000013807 FAM81BQ96LP2 452 aa16.49■□□□□ 0.23
ERCC1-201ENST00000013807 SERPINB11Q96P15 392 aa16.49■□□□□ 0.23
ERCC1-201ENST00000013807 DDX50Q9BQ39 737 aaKnown RBP16.49■□□□□ 0.23
ERCC1-201ENST00000013807 TRIM62Q9BVG3 475 aa16.49■□□□□ 0.23
ERCC1-201ENST00000013807 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.49■□□□□ 0.23
ERCC1-201ENST00000013807 GOLGA6L7A0A1B0GV03 622 aa16.48■□□□□ 0.23
ERCC1-201ENST00000013807 C10orf142B7Z368 130 aa16.48■□□□□ 0.23
ERCC1-201ENST00000013807 TBL1XO60907 577 aa16.48■□□□□ 0.23
ERCC1-201ENST00000013807 AFPP02771 609 aaKnown RBP16.48■□□□□ 0.23
ERCC1-201ENST00000013807 SPINK2P20155 84 aa16.48■□□□□ 0.23
ERCC1-201ENST00000013807 CD70P32970 193 aa16.48■□□□□ 0.23
ERCC1-201ENST00000013807 ACSL1P33121 698 aa16.48■□□□□ 0.23
ERCC1-201ENST00000013807 RPS14P62263 151 aaKnown RBP16.48■□□□□ 0.23
ERCC1-201ENST00000013807 BNC1Q01954 994 aa16.48■□□□□ 0.23
ERCC1-201ENST00000013807 PAK1Q13153 545 aa16.48■□□□□ 0.23
ERCC1-201ENST00000013807 TRIP6Q15654 476 aaKnown RBP16.48■□□□□ 0.23
ERCC1-201ENST00000013807 FNDC3BQ53EP0 1204 aaKnown RBP16.48■□□□□ 0.23
ERCC1-201ENST00000013807 HJURPQ8NCD3 748 aaPredicted RBP16.48■□□□□ 0.23
ERCC1-201ENST00000013807 DQX1Q8TE96 717 aaKnown RBP16.48■□□□□ 0.23
ERCC1-201ENST00000013807 CYB5D2Q8WUJ1 264 aa16.48■□□□□ 0.23
ERCC1-201ENST00000013807 ZNF606Q8WXB4 792 aa16.48■□□□□ 0.23
ERCC1-201ENST00000013807 SRRTQ9BXP5 876 aaKnown RBP16.48■□□□□ 0.23
ERCC1-201ENST00000013807 RSPH9Q9H1X1 276 aaPredicted RBP16.48■□□□□ 0.23
ERCC1-201ENST00000013807 LHX5Q9H2C1 402 aa16.48■□□□□ 0.23
ERCC1-201ENST00000013807 EIF2B4Q9UI10 523 aaKnown RBP16.48■□□□□ 0.23
ERCC1-201ENST00000013807 ZMIZ1Q9ULJ6 1067 aa16.48■□□□□ 0.23
ERCC1-201ENST00000013807 SCML1Q9UN30 329 aa16.48■□□□□ 0.23
ERCC1-201ENST00000013807 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.48■□□□□ 0.23
ERCC1-201ENST00000013807 PCDHGB2Q9Y5G2 931 aa16.48■□□□□ 0.23
ERCC1-201ENST00000013807 FREM2Q5SZK8 3169 aa16.48■□□□□ 0.23
ERCC1-201ENST00000013807 ZFYVE26Q68DK2 2539 aa16.48■□□□□ 0.23
ERCC1-201ENST00000013807 PLXNA2O75051 1894 aa16.48■□□□□ 0.23
ERCC1-201ENST00000013807 GOLGA4Q13439 2230 aaKnown RBP16.47■□□□□ 0.23
ERCC1-201ENST00000013807 ACACAQ13085 2346 aa16.47■□□□□ 0.23
ERCC1-201ENST00000013807 PIK3R2O00459 728 aa16.47■□□□□ 0.23
ERCC1-201ENST00000013807 HYAL3O43820 417 aaPredicted RBP16.47■□□□□ 0.23
ERCC1-201ENST00000013807 SH3BP5O60239 455 aa16.47■□□□□ 0.23
ERCC1-201ENST00000013807 FGFR1OPO95684 399 aaKnown RBP16.47■□□□□ 0.23
ERCC1-201ENST00000013807 CALCAP01258 141 aa16.47■□□□□ 0.23
ERCC1-201ENST00000013807 IGLV3-25P01717 112 aa16.47■□□□□ 0.23
ERCC1-201ENST00000013807 ASLP04424 464 aa16.47■□□□□ 0.23
ERCC1-201ENST00000013807 CAPNS1P04632 268 aa16.47■□□□□ 0.23
ERCC1-201ENST00000013807 POLR2EP19388 210 aaKnown RBP16.47■□□□□ 0.23
ERCC1-201ENST00000013807 MS4A13Q5J8X5 152 aa16.47■□□□□ 0.23
ERCC1-201ENST00000013807 USP30Q70CQ3 517 aa16.47■□□□□ 0.23
ERCC1-201ENST00000013807 ZCCHC9Q8N567 271 aaKnown RBP16.47■□□□□ 0.23
ERCC1-201ENST00000013807 ADAMTS14Q8WXS8 1223 aa16.47■□□□□ 0.23
ERCC1-201ENST00000013807 PRICKLE1Q96MT3 831 aaPredicted RBP16.47■□□□□ 0.23
ERCC1-201ENST00000013807 SGK2Q9HBY8 427 aa16.47■□□□□ 0.23
ERCC1-201ENST00000013807 KIAA1522Q9P206 1035 aaPredicted RBP16.47■□□□□ 0.23
ERCC1-201ENST00000013807 INTS6Q9UL03 887 aaKnown RBP16.47■□□□□ 0.23
ERCC1-201ENST00000013807 CTNND2Q9UQB3 1225 aa16.47■□□□□ 0.23
ERCC1-201ENST00000013807 NAALADL1Q9UQQ1 740 aa16.47■□□□□ 0.23
ERCC1-201ENST00000013807 DOCK9Q9BZ29 2069 aa16.46■□□□□ 0.23
ERCC1-201ENST00000013807 PAPSS1O43252 624 aaPredicted RBP16.46■□□□□ 0.23
ERCC1-201ENST00000013807 MED7O43513 233 aa16.46■□□□□ 0.23
ERCC1-201ENST00000013807 CER1O95813 267 aa16.46■□□□□ 0.23
ERCC1-201ENST00000013807 AFF3P51826 1226 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms