RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 ADAM28Q9UKQ2 775 aa10.61□□□□□ -0.71
NIPAL3-201ENST00000003912 IGLV3-22A0A075B6J6 115 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 CES2O00748 559 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 DAB1O75553 588 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 MRPS5P82675 430 aaKnown RBP10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 MAMLD1Q13495 774 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 DDX39BQ13838 428 aaKnown RBP10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 CHI3L2Q15782 390 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 NYAP1Q6ZVC0 841 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 PANX3Q96QZ0 392 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 GANQ9H2C0 597 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 NPHS2Q9NP85 383 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 CHCHD3Q9NX63 227 aaKnown RBP10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 TUBGCP4Q9UGJ1 667 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 KCNK1O00180 336 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 SYN3O14994 580 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 TGFB1I1O43294 461 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 PPP1R37O75864 691 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 KDELR1P24390 212 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 CD151P48509 253 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 PRKAA1Q13131 559 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 LRRC38Q5VT99 294 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 ZNF438Q7Z4V0 828 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 CTU1Q7Z7A3 348 aaKnown RBP10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 SETD3Q86TU7 594 aaPredicted RBP10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 RASAL3Q86YV0 1011 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 BBS2Q9BXC9 721 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 CEP41Q9BYV8 373 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 ILKAPQ9H0C8 392 aaPredicted RBP10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 ARHGAP28Q9P2N2 729 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 CTNNAL1Q9UBT7 734 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 SOAT1P35610 550 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 ANXA11P50995 505 aaKnown RBP10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 GUCY1A3Q02108 690 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 FPGSQ05932 587 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 INPP5AQ14642 412 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 RRP1BQ14684 758 aaKnown RBP10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 NAA30Q147X3 362 aaPredicted RBP10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 CCL14Q16627 93 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 CACUL1Q86Y37 369 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 PHF13Q86YI8 300 aaPredicted RBP10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 SMG7Q92540 1137 aaKnown RBP10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 PNKPQ96T60 521 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 GID8Q9NWU2 228 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 MTO1Q9Y2Z2 717 aaKnown RBP10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 EVPLLA8MZ36 301 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 ARVCFO00192 962 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 ARIH2O95376 493 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 GLI1P08151 1106 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 PGAM1P18669 254 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 LRRC74AQ0VAA2 488 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 DUSP4Q13115 394 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 TARBP2Q15633 366 aaKnown RBP10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 FAM46CQ5VWP2 391 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 KIAA1324Q6UXG2 1013 aaKnown RBP10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 DLK2Q6UY11 383 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 OTOAQ7RTW8 1153 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 DNAAF5Q86Y56 855 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 MTMR8Q96EF0 704 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 MRPL45Q9BRJ2 306 aaKnown RBP10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 ST6GALNAC4Q9H4F1 302 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 ETNK1Q9HBU6 452 aa10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 TRMT13Q9NUP7 481 aaKnown RBP10.6□□□□□ -0.71
NIPAL3-201ENST00000003912 NCF1BA6NI72 391 aaPredicted RBP10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 ERI2A8K979 691 aaKnown RBP10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 NCF1CA8MVU1 366 aaPredicted RBP10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 NCF1P14598 390 aaPredicted RBP10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 CLK2P49760 499 aaKnown RBP10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 MEA1Q16626 185 aa10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 C15orf59Q2T9L4 293 aaPredicted RBP10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 SPANXN3Q5MJ09 141 aa10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 AKAP7Q9P0M2 348 aaPredicted RBP10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 TBC1D14Q9P2M4 693 aa10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 PJA2O43164 708 aa10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 CLTBP09497 229 aa10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 MBTD1Q05BQ5 628 aa10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 HIC1Q14526 733 aa10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 SDHAF4Q5VUM1 108 aa10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 HES6Q96HZ4 224 aa10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 ZNF333Q96JL9 665 aa10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 ING2Q9H160 280 aa10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 GJB6O95452 261 aa10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 CYP1A2P05177 515 aa10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 PYGMP11217 842 aa10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 CCL5P13501 91 aa10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 HSD17B3P37058 310 aa10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 AP2B1P63010 937 aa10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 PARP6Q2NL67 630 aa10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 BRMS1LQ5PSV4 323 aa10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 PDPK2PQ6A1A2 396 aa10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 FUT10Q6P4F1 479 aa10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 RGS9BPQ6ZS82 235 aa10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 ZIM3Q96PE6 472 aa10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 ATP13A3Q9H7F0 1226 aa10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 BRD9Q9H8M2 597 aa10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 DNPEPQ9ULA0 475 aa10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 ZMYND8Q9ULU4 1186 aaPredicted RBP10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 ZNF839A8K0R7 811 aa10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 CLDN5O00501 218 aa10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 FGFR1P11362 822 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms