RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 PRKAA2P54646 552 aa4.36□□□□□ -1.71
CFTR-201ENST00000003084 SESN3P58005 492 aa4.36□□□□□ -1.71
CFTR-201ENST00000003084 PDCLQ13371 301 aa4.36□□□□□ -1.71
CFTR-201ENST00000003084 CAPSQ13938 189 aa4.36□□□□□ -1.71
CFTR-201ENST00000003084 GRM3Q14832 879 aa4.36□□□□□ -1.71
CFTR-201ENST00000003084 LRRC14Q15048 493 aa4.36□□□□□ -1.71
CFTR-201ENST00000003084 SPDYAQ5MJ70 313 aa4.36□□□□□ -1.71
CFTR-201ENST00000003084 CACHD1Q5VU97 1274 aa4.36□□□□□ -1.71
CFTR-201ENST00000003084 LRRC8DQ7L1W4 858 aa4.36□□□□□ -1.71
CFTR-201ENST00000003084 SH3RF1Q7Z6J0 888 aa4.36□□□□□ -1.71
CFTR-201ENST00000003084 NLRP14Q86W24 1093 aa4.36□□□□□ -1.71
CFTR-201ENST00000003084 NUP93Q8N1F7 819 aa4.36□□□□□ -1.71
CFTR-201ENST00000003084 CPA6Q8N4T0 437 aa4.36□□□□□ -1.71
CFTR-201ENST00000003084 HJURPQ8NCD3 748 aaPredicted RBP4.36□□□□□ -1.71
CFTR-201ENST00000003084 TMEM161BQ8NDZ6 487 aa4.36□□□□□ -1.71
CFTR-201ENST00000003084 ZNF606Q8WXB4 792 aa4.36□□□□□ -1.71
CFTR-201ENST00000003084 ACSF2Q96CM8 615 aaPredicted RBP4.36□□□□□ -1.71
CFTR-201ENST00000003084 REPS1Q96D71 796 aa4.36□□□□□ -1.71
CFTR-201ENST00000003084 EXOC2Q96KP1 924 aa4.36□□□□□ -1.71
CFTR-201ENST00000003084 GAD1Q99259 594 aa4.36□□□□□ -1.71
CFTR-201ENST00000003084 TBL1YQ9BQ87 522 aa4.36□□□□□ -1.71
CFTR-201ENST00000003084 ATP13A1Q9HD20 1204 aa4.36□□□□□ -1.71
CFTR-201ENST00000003084 GID8Q9NWU2 228 aa4.36□□□□□ -1.71
CFTR-201ENST00000003084 CHCHD3Q9NX63 227 aaKnown RBP4.36□□□□□ -1.71
CFTR-201ENST00000003084 UBA2Q9UBT2 640 aaPredicted RBP4.36□□□□□ -1.71
CFTR-201ENST00000003084 ATRNL1Q5VV63 1379 aa4.36□□□□□ -1.71
CFTR-201ENST00000003084 USP27XA6NNY8 438 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 RAD51CO43502 376 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 NDUFS2O75306 463 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 SERPINF2P08697 491 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 OR56A5P0C7T3 313 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 PNMA6AP0CW24 399 aaPredicted RBP4.35□□□□□ -1.71
CFTR-201ENST00000003084 NPR3P17342 541 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 CHKAP35790 457 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 PSMD5Q16401 504 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 GRTP1Q5TC63 336 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 FBXO38Q6PIJ6 1188 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 CCNI2Q6ZMN8 369 aaPredicted RBP4.35□□□□□ -1.71
CFTR-201ENST00000003084 NT5DC3Q86UY8 548 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 SLC22A9Q8IVM8 553 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 C3orf20Q8ND61 904 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 PTCD2Q8WV60 388 aaKnown RBP4.35□□□□□ -1.71
CFTR-201ENST00000003084 MAML3Q96JK9 1138 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 APOL5Q9BWW9 433 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 C11orf49Q9H6J7 331 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 NT5MQ9NPB1 228 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 AKAP7Q9P0M2 348 aaPredicted RBP4.35□□□□□ -1.71
CFTR-201ENST00000003084 PCDHAC2Q9Y5I4 1007 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 LRP6O75581 1613 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 IGKV6D-41A0A0C4DH26 115 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 CFAP73A6NFT4 308 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 POM121CA8CG34 1229 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.35□□□□□ -1.71
CFTR-201ENST00000003084 FAM47E-STBD1D6RA91 191 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 C1QTNF3-AMACRE9PGA6 284 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 H3BMM5 538 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 ZNF185O15231 689 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 ZNF862O60290 1169 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 PMPCBO75439 489 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 CCDC130P13994 396 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 PGAM1P18669 254 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 KRT4P19013 534 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 OR1E1P30953 314 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 CD52P31358 61 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 GLUD2P49448 558 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 NAA20P61599 178 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 AP2B1P63010 937 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 HPCAP84074 193 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 OTUD4Q01804 1114 aaKnown RBP4.35□□□□□ -1.71
CFTR-201ENST00000003084 CDH17Q12864 832 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 PKN2Q16513 984 aaKnown RBP4.35□□□□□ -1.71
CFTR-201ENST00000003084 FAM153CQ494X1 144 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 BEND6Q5SZJ8 279 aaPredicted RBP4.35□□□□□ -1.71
CFTR-201ENST00000003084 ANKS6Q68DC2 871 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 USP45Q70EL2 814 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 ZNF571Q7Z3V5 609 aaPredicted RBP4.35□□□□□ -1.71
CFTR-201ENST00000003084 PATL1Q86TB9 770 aaKnown RBP4.35□□□□□ -1.71
CFTR-201ENST00000003084 PCYOX1LQ8NBM8 494 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 FLCNQ8NFG4 579 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 SUSD6Q92537 303 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 HAS1Q92839 578 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 ATXN7L3BQ96GX2 97 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 MAGEB10Q96LZ2 347 aaPredicted RBP4.35□□□□□ -1.71
CFTR-201ENST00000003084 INPP4AQ96PE3 977 aaPredicted RBP4.35□□□□□ -1.71
CFTR-201ENST00000003084 CIPCQ9C0C6 399 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 SLC39A8Q9C0K1 460 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 SMG9Q9H0W8 520 aaKnown RBP4.35□□□□□ -1.71
CFTR-201ENST00000003084 RMND5AQ9H871 391 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 RBM12Q9NTZ6 932 aaKnown RBP4.35□□□□□ -1.71
CFTR-201ENST00000003084 SEPT3Q9UH03 358 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.35□□□□□ -1.71
CFTR-201ENST00000003084 KLRG2A4D1S0 409 aaPredicted RBP4.35□□□□□ -1.71
CFTR-201ENST00000003084 HNRNPCL2B2RXH8 293 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 SYN3O14994 580 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 MEFVO15553 781 aaPredicted RBP4.35□□□□□ -1.71
CFTR-201ENST00000003084 HNRNPRO43390 633 aaKnown RBP4.35□□□□□ -1.71
CFTR-201ENST00000003084 MTA2O94776 668 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 PCDH8O95206 1070 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 GLUD1P00367 558 aa4.35□□□□□ -1.71
CFTR-201ENST00000003084 ERVK-10P10266 1014 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms