RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Mysm1Q69Z66 819 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 Efr3bQ6ZQ18 817 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 Wscd1Q80XH4 572 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 Clasp2Q8BRT1 1286 aaKnown RBP13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 Ankrd52Q8BTI7 1076 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 Dync1li1Q8R1Q8 523 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 Rem2Q8VEL9 341 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 Pcdhb4Q91XZ6 784 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 Pcdha1Q91Y21 948 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 Tcaf2Q921K8 919 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 Cog2Q921L5 731 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 GmprQ9DCZ1 345 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 Ccdc86Q9JJ89 426 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 Tdp2Q9JJX7 370 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 Spag6Q9JLI7 507 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 LipaQ9Z0M5 397 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 Slc23a1Q9Z2J0 605 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 Zfp236S4R299 1847 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 Ttc30a2A2AKQ8 664 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 Gimd1E9PW74 217 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 Vmn2r87E9PZX4 848 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 Tbxas1P36423 533 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 Btg3P50615 252 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 HmgcrQ01237 887 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 Cdk7Q03147 346 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 Nek10Q3UGM2 1111 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 Gm1587Q3UT80 123 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 Zfp956Q3UZY6 572 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 Trcg1Q58Y74 825 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 Papd5Q68ED3 633 aaKnown RBP13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 Fam107aQ78TU8 144 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 Olfr293Q7TS10 336 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 Mis18bp1Q80WQ8 998 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 Bmp3Q8BHE5 468 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 Aste1Q8BIR2 672 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 Trerf1Q8BXJ2 1205 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 Scara3Q8C850 606 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 Alas1Q8VC19 642 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 Itgbl1Q8VDV0 494 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 Tubgcp4Q9D4F8 667 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 Cul3Q9JLV5 768 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 Acox2Q9QXD1 681 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 PignQ9R1S3 931 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 Trim5E9PV98 497 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 Gm4302E9PX25 294 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 Kif6E9PX57 802 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 Gm10719E9Q7T3 227 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 AlbP07724 608 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 Wnt3aP27467 352 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 Pcnx4Q3UVY5 1174 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 Snx25Q3ZT31 840 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 Chst10Q6PGK7 356 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 Entpd3Q8BFW6 529 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 Cox16Q9CR63 106 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 Arpc2Q9CVB6 300 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 Angptl2Q9R045 493 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 Rbck1Q9WUB0 508 aa13.24□□□□□ -0.29
Nup88-203ENSMUST00000108531 Ces1bD3Z5G7 567 aa13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 DgkdE9PUQ8 1220 aa13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 EsrraO08580 422 aa13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 Tgfb2P27090 414 aa13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 Sycp3P70281 254 aa13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 Arhgap1Q5FWK3 439 aa13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 Slc5a10Q5SWY8 596 aa13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 Armc12Q80X86 340 aa13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 Usp6nlQ80XC3 819 aa13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 Plin5Q8BVZ1 463 aa13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 LnpepQ8C129 1025 aa13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 Slc15a5Q8CBB2 566 aa13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 Csde1Q91W50 798 aaKnown RBP13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 Creld1Q91XD7 420 aa13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 Zmat2Q9CPW7 199 aa13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 DcpsQ9DAR7 338 aa13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 Tubd1Q9R1K7 455 aa13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 Adamts6D3Z1A5 1117 aa13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 PtgisO35074 501 aa13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 C1qbpO35658 278 aa13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 Cdo1P60334 200 aa13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 Mettl17Q3U2U7 461 aa13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 ADGRF3Q58Y75 991 aa13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 RgnQ64374 299 aa13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 Nemp1Q6ZQE4 437 aa13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 Pdk1Q8BFP9 434 aaKnown RBP13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 Stk32aQ8BGW6 398 aa13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 Tdp1Q8BJ37 609 aa13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 Arhgef33Q8BW86 850 aa13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 Podxl2Q8CAE9 603 aa13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 CherpQ8CGZ0 936 aaKnown RBP13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 Clip4Q8CI96 704 aa13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 Ago3Q8CJF9 860 aa13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 Ace2Q8R0I0 805 aa13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 Pkp2Q9CQ73 795 aaKnown RBP13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 Arl2Q9D0J4 184 aa13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 Plin3Q9DBG5 437 aa13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 Nme3Q9WV85 169 aa13.23□□□□□ -0.29
Nup88-203ENSMUST00000108531 Iqcj-Schip1A0A088MLT8 559 aa13.22□□□□□ -0.29
Nup88-203ENSMUST00000108531 Fam81bA0A140LI28 432 aa13.22□□□□□ -0.29
Nup88-203ENSMUST00000108531 Olfr1160A2AVT0 319 aa13.22□□□□□ -0.29
Nup88-203ENSMUST00000108531 Mkrn2osD3Z393 217 aa13.22□□□□□ -0.29
Nup88-203ENSMUST00000108531 Vmn2r100E9QAZ9 850 aa13.22□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 90.4 ms