RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Elmo2Q8BHL5 732 aa9.97□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Irak3Q8K4B2 609 aa9.97□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Snx15Q91WE1 337 aa9.97□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Tas1r2Q925I4 843 aa9.97□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Nipsnap3bQ9CQE1 247 aa9.97□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 PompQ9CQT5 141 aa9.97□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Tnfsf13bQ9WU72 309 aa9.97□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 NinQ61043 2035 aa9.97□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Col2a1P28481 1487 aa9.97□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Wdr49A0A0N4SUK7 710 aa9.97□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Bclaf3A2AG58 752 aaKnown RBP9.97□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Dhtkd1A2ATU0 921 aa9.97□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Zfp558E9Q1J0 407 aa9.97□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Ptar1E9QAB6 424 aa9.97□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Adam15O88839 864 aa9.97□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Olfm1O88998 485 aa9.97□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Rb1P13405 921 aa9.97□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Lhx5P61375 402 aa9.97□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Nfe2Q07279 373 aa9.97□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Ceacam5Q3UKK2 947 aa9.97□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 P3h1Q3V1T4 739 aa9.97□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Grm6Q5NCH9 871 aa9.97□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Itih1Q61702 907 aa9.97□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Q810S2 196 aa9.97□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Best2Q8BGM5 508 aa9.97□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Ccdc184Q8BMK5 191 aa9.97□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Lrrc19Q8BZT5 364 aa9.97□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Pacs1Q8K212 961 aa9.97□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Olfr356Q8VFP5 315 aa9.97□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Vangl2Q91ZD4 521 aa9.97□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 LactbQ9EP89 551 aa9.97□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 DgkeQ9R1C6 564 aa9.97□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 PignQ9R1S3 931 aa9.97□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Chek2Q9Z265 546 aa9.97□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 PotegA5H0M4 473 aa9.96□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Hmgxb3G3X9M3 1254 aa9.96□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 HdcP23738 662 aa9.96□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 PrkcdP28867 674 aa9.96□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Kpna2P52293 529 aaKnown RBP9.96□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 CiitaP79621 1155 aa9.96□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Prm3Q62100 101 aa9.96□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 FAM120AQ6A0A9 1112 aaKnown RBP9.96□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Psd2Q6P1I6 770 aa9.96□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Sarm1Q6PDS3 724 aa9.96□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Rnf220Q6PDX6 566 aa9.96□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Bnip1Q6QD59 228 aa9.96□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Tas2r125Q7M710 311 aa9.96□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Zdhhc15Q8BGJ0 337 aa9.96□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 NaprtQ8CC86 538 aa9.96□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Il31raQ8K5B1 716 aa9.96□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 CarfQ8VHI4 689 aa9.96□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Wrnip1Q91XU0 660 aa9.96□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 CabyrQ9D424 453 aa9.96□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Tubgcp4Q9D4F8 667 aa9.96□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Fbxo16Q9QZM9 334 aa9.96□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Arhgef26D3YYY8 869 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Gm4302E9PX25 294 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 AmacrO09174 381 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 UmpsP13439 481 aaKnown RBP9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Il12bP43432 335 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Asprv1Q09PK2 339 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Zfp217Q3U0X6 1041 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 B3gntl1Q3U129 357 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Slc20a1Q61609 681 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Krt32Q62168 407 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Scd4Q6T707 353 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 C6.1alQ7M757 291 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 4930503B20RikQ80ZP0 234 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Pnma2Q8BHK0 365 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Gbp5Q8CFB4 590 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Acad10Q8K370 1069 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Spag16Q8K450 639 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Snx9Q91VH2 595 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Cog2Q921L5 731 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Ino80bQ99PT3 375 aaKnown RBP9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Rgs10Q9CQE5 181 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Them5Q9CQJ0 248 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Serbp1Q9CY58 407 aaKnown RBP9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Zfp623Q9CY99 499 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Trim54Q9ERP3 366 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Slc29a1Q9JIM1 460 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Smad9Q9JIW5 430 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Rfx5Q9JL61 658 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Morf4l2Q9R0Q4 288 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Nrf1Q9WU00 503 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Ern2Q9Z2E3 911 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Gm8113E0CXS8 587 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Zfp358E9Q8M1 571 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Ebf3O08791 596 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 C1qbpO35658 278 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Hoxb8P09632 243 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Atoh1P48985 351 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Arpp19P56212 112 aaKnown RBP9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Abce1P61222 599 aaKnown RBP9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Stx1bP61264 288 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Olfm3P63056 478 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Polr1bP70700 1135 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 RalgdsQ03385 852 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 ProcrQ64695 242 aa9.96□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 Scaf4Q6PFF0 1209 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 45.9 ms