RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Tfb1mQ8JZM0 345 aaKnown RBP13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Fbxw7Q8VBV4 629 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Lims2Q91XD2 341 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Twf1Q91YR1 350 aaKnown RBP13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 TtpalQ9D3D0 343 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Gucy1a3Q9ERL9 691 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Znhit2Q9QY66 399 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Bmp15Q9Z0L4 392 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Trim5E9PV98 497 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Syngr1O55100 234 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Zfy2P20662 777 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 S100bP50114 92 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 OsbpQ3B7Z2 805 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Gucy2fQ5SDA5 1108 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Cand2Q6ZQ73 1235 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Zmiz2Q8CIE2 920 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Sike1Q9CPR7 207 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 AticQ9CWJ9 592 aaKnown RBP13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Cacng4Q9JJV4 327 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Prg3Q9JL95 222 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 NumbQ9QZS3 653 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Ttc3O88196 1979 aaKnown RBP13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Il2P04351 169 aa13.05□□□□□ -0.32
Rnf4-201ENSMUST00000030992 En2P09066 324 aa13.05□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Cxcl9P18340 126 aa13.05□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Cdo1P60334 200 aa13.05□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Cfap52Q5F201 620 aa13.05□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Fbxo39Q5NBU5 443 aa13.05□□□□□ -0.32
Rnf4-201ENSMUST00000030992 CyldQ80TQ2 952 aa13.05□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Q80Y73 168 aa13.05□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Ppp1r12bQ8BG95 976 aa13.05□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Echs1Q8BH95 290 aaKnown RBP13.05□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Iars2Q8BIJ6 1012 aa13.05□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Atg14Q8CDJ3 492 aa13.05□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Dedd2Q8QZV0 330 aa13.05□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Sbk1Q8QZX0 417 aa13.05□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Synpo2Q91YE8 1087 aaKnown RBP13.05□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Homer3Q99JP6 356 aa13.05□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Mphosph6Q9D1Q1 161 aa13.05□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Syap1Q9D5V6 365 aa13.05□□□□□ -0.32
Rnf4-201ENSMUST00000030992 B4galt4Q9JJ04 344 aa13.05□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Nupr1Q9WTK0 80 aa13.05□□□□□ -0.32
Rnf4-201ENSMUST00000030992 FscbA1EGX6 1074 aa13.05□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Gm3164L7N2B9 238 aa13.05□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Gm3264L7N2C5 238 aa13.05□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Pde8aO88502 823 aa13.05□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Crabp2P22935 138 aa13.05□□□□□ -0.32
Rnf4-201ENSMUST00000030992 NrlP54846 237 aa13.05□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Sycp3P70281 254 aa13.05□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Garnl3Q3V0G7 1038 aa13.05□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Fbxw2Q60584 422 aa13.05□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Itm2aQ61500 263 aa13.05□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Il17reQ8BH06 637 aa13.05□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Tmprss4Q8VCA5 435 aa13.05□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Pcdhb17Q91VD8 799 aa13.05□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Pde6cQ91ZQ1 861 aa13.05□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Serpina1fQ9DCQ7 411 aa13.05□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Krt7Q9DCV7 457 aa13.05□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Gm43951A0A0N4SUT6 962 aa13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Dnmt3cP0DOY1 709 aa13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Pde6bP23440 856 aa13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Dpep1P31428 410 aa13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 RcvrnP34057 202 aa13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Dpf3P58269 378 aa13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Gabpb1Q00420 383 aa13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Ano7Q14AT5 859 aa13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Fbxw11Q5SRY7 542 aaKnown RBP13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Gpr65Q61038 337 aa13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Dusp16Q6PCP3 660 aa13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Efr3bQ6ZQ18 817 aa13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 RubcnQ80U62 956 aa13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 4933409G03RikQ8C5U0 320 aa13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 ClmpQ8R373 373 aa13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Chchd3Q9CRB9 227 aaKnown RBP13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Sgf29Q9DA08 293 aaKnown RBP13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Cyp4v2Q9DBW0 525 aa13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Tmem115Q9WUH1 350 aa13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Vmn2r11E9Q4X4 861 aa13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Gm5160F8VPN3 147 aa13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Vmn2r55G3UWZ4 781 aa13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 E230025N22RikG5E8S3 482 aa13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Vmn2r53L7N473 806 aa13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Ercc2O08811 760 aaKnown RBP13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 TankP70347 448 aa13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Syce2Q505B8 171 aa13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Pla2g4dQ50L43 825 aa13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Grik1Q60934 836 aa13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Ndrg1Q62433 394 aa13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Tas2r125Q7M710 311 aa13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Clec2eQ80XD9 204 aa13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 CcnyQ8BGU5 341 aa13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Usp43Q8BUM9 1132 aa13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Washc5Q8C2E7 1159 aaKnown RBP13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Agbl2Q8CDK2 862 aa13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Acvr1cQ8K348 493 aa13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Pglyrp2Q8VCS0 530 aa13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Q8VDP2 222 aa13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 PompQ9CQT5 141 aa13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Rmdn1Q9DCV4 305 aa13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Timp4Q9JHB3 224 aa13.04□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 41 ms