RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Zcchc12Q9CZA5 402 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Tnfaip8l2Q9D8Y7 184 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 NfkbizQ9EST8 728 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Astn1Q61137 1302 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Prdm12A2AJ77 365 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Apold1E9Q0X2 246 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Larp7Q05CL8 570 aaKnown RBP10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Psd3Q2PFD7 1037 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 LcorlQ3U285 600 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Lurap1lQ8K2P1 221 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Mcoln2Q8K595 566 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Sirt2Q8VDQ8 389 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Chid1Q922Q9 393 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 HnrnpabQ99020 285 aaKnown RBP10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Bloc1s6Q9R0C0 172 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 LipaQ9Z0M5 397 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Akap12Q9WTQ5 1684 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Slc6a16A0A1L1SR47 742 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 UprtB1AVZ0 310 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Slc4a5E9Q3M5 1116 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Magea4F2Z493 315 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 PolP11369 1281 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Zfp217Q3U0X6 1041 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 CybbQ61093 570 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 ProcrQ64695 242 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Zdhhc24Q6IR37 284 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Fbxo28Q8BIG4 368 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Slc39a11Q8BWY7 342 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Mab21L3Q8CI17 429 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Gmcl1Q920G9 524 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Nipsnap3bQ9CQE1 247 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Bcs1lQ9CZP5 418 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 XkQ9QXY7 446 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Arhgef28P97433 1693 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Znf609Q8BZ47 1413 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 4931406B18RikA2RSL7 367 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Kpna4O35343 521 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Arpc4P59999 168 aaKnown RBP10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 ZfatQ7TS63 1237 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Mxd3Q80US8 206 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Asb2Q8K0L0 634 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 A0A1L1ST33 502 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Prdm15E9Q8T2 1174 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Ikzf3O08900 507 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 PtgisO35074 501 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Npy5rO70342 466 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Gcnt3Q5JCT0 437 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 TsnQ62348 228 aaKnown RBP10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Pik3r3Q64143 461 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Aldh3b1Q80VQ0 468 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Vac14Q80WQ2 782 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Ints5Q8CHT3 1018 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Adgre4Q91ZE5 689 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Fam173bQ9D1Z3 247 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Olfr67F8VPJ8 320 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Nr3c1P06537 783 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Ankrd13bQ5F259 626 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Glra2Q7TNC8 452 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 SowahdQ8BY98 327 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Tbc1d13Q8R3D1 400 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Q99KU6 348 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Hmgn3Q9DCB1 99 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 QkiQ9QYS9 341 aaKnown RBP10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Tle6Q9WVB3 581 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Pgbd1E9Q492 415 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Plk2P53351 682 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Serpinb5P70124 375 aaKnown RBP10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Znf280dQ68FE8 974 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Ildr1Q8CBR1 537 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 C8aQ8K182 587 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Kdelr1Q99JH8 212 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 CabyrQ9D424 453 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 1600015I10RikE9Q745 711 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Ccdc7bE9Q9Y3 381 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Serpind1P49182 478 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Clec12aQ504P2 267 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Mettl21eQ8CDZ2 244 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 DnmbpQ6TXD4 1580 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Pcdh7A0A0A6YY83 1255 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Gm2244L7N2A3 218 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 ChgbP16014 677 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Pdss1Q33DR2 409 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Usp7Q6A4J8 1103 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 B3galnt2Q8BG28 504 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Klhl25Q8R2P1 589 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Tma16Q9CR02 221 aaKnown RBP10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Mettl7bQ9DD20 244 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Tnfrsf21Q9EPU5 655 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Kbtbd2G3X9X1 623 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Nfkbil1O88995 381 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Surf2P09926 257 aaKnown RBP10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Slc11a2P49282 568 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Atp6v0d1P51863 351 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Arpp19P56212 112 aaKnown RBP10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Pim2Q62070 370 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Fam83eQ80XS7 481 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Prr33Q8C494 260 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Teddm1bQ8CC62 306 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Nox1Q8CIZ9 591 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Aim2Q91VJ1 354 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms