RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Asb4Q9WV71 426 aa17.09■□□□□ 0.33
Col17a1-201ENSMUST00000026045 AtrnQ9WU60 1428 aa17.09■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Angpt1O08538 498 aa17.09■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Cdc25cP48967 447 aa17.09■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Arf4P61750 180 aa17.09■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Ugt1a2P70691 533 aa17.09■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Phactr1Q2M3X8 580 aa17.09■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Ccdc185Q3V118 621 aa17.09■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Esyt3Q5DTI8 891 aa17.09■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Igdcc3Q8BQC3 813 aa17.09■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Taf5Q8C092 801 aa17.09■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Dedd2Q8QZV0 330 aa17.09■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Msh5Q9QUM7 833 aa17.09■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Smok3aC0HKC8 504 aa17.09■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Smok3bC0HKC9 504 aa17.09■□□□□ 0.33
Col17a1-201ENSMUST00000026045 DgkdE9PUQ8 1220 aa17.09■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Irf8P23611 424 aa17.09■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Hk3Q3TRM8 922 aa17.09■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Trappc3lQ4KL14 181 aa17.09■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Ddr2Q62371 854 aa17.09■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Zbtb32Q9JKD9 465 aa17.09■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Nhsl2B1AXH1 854 aa17.09■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Wdr72D3YYM4 1114 aa17.09■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Gm17175E9Q528 179 aa17.09■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Vmn2r35E9Q7U8 861 aa17.09■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Rpl21O09167 160 aaKnown RBP17.09■□□□□ 0.33
Col17a1-201ENSMUST00000026045 IqcmQ149I8 489 aa17.09■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Fam49bQ921M7 324 aa17.09■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Tmem39aQ9CYC3 486 aa17.09■□□□□ 0.33
Col17a1-201ENSMUST00000026045 HaspinQ9Z0R0 754 aa17.09■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Shoc2O88520 582 aaKnown RBP17.08■□□□□ 0.33
Col17a1-201ENSMUST00000026045 RetsatQ64FW2 609 aa17.08■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Pcdha9Q91Y11 979 aa17.08■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Fuca2Q99KR8 461 aa17.08■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Pidd1Q9ERV7 915 aa17.08■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Smpd3Q9JJY3 655 aa17.08■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Ca5bQ9QZA0 317 aa17.08■□□□□ 0.33
Col17a1-201ENSMUST00000026045 BC035947B2RQY6 695 aa17.08■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Magea4F2Z493 315 aa17.08■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Usp17ldG5E8G2 545 aa17.08■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Usp17lcG5E8I7 545 aa17.08■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Ttc39dQ0VF76 604 aa17.08■□□□□ 0.33
Col17a1-201ENSMUST00000026045 GmpsQ3THK7 693 aa17.08■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Gpr141Q7TQP0 305 aa17.08■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Baiap2l2Q80Y61 522 aa17.08■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Tbc1d17Q8BYH7 645 aa17.08■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Fmo2Q8K2I3 535 aa17.08■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Asb6Q91ZU1 418 aa17.08■□□□□ 0.33
Col17a1-201ENSMUST00000026045 DtnaQ9D2N4 746 aa17.08■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Tor1aQ9ER39 333 aa17.08■□□□□ 0.33
Col17a1-201ENSMUST00000026045 NbnQ9R207 751 aa17.08■□□□□ 0.33
Col17a1-201ENSMUST00000026045 Trpv2Q9WTR1 756 aa17.08■□□□□ 0.33
Col17a1-201ENSMUST00000026045 C3P01027 1663 aa17.08■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Robo1O89026 1612 aa17.08■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Rundc3aO08576 446 aa17.08■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Sstr1P30873 391 aa17.08■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Rbp3P49194 1234 aa17.08■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Ndufs6P52503 116 aa17.08■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Trappc9Q3U0M1 1148 aa17.08■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Fbxo39Q5NBU5 443 aa17.08■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Rnf145Q5SWK7 663 aa17.08■□□□□ 0.32
Col17a1-201ENSMUST00000026045 JrkQ60976 557 aa17.08■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Pdcd4Q61823 469 aa17.08■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Sephs1Q8BH69 392 aa17.08■□□□□ 0.32
Col17a1-201ENSMUST00000026045 RtknQ8C6B2 564 aa17.08■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Mgat5Q8R4G6 740 aa17.08■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Usb1Q91W78 267 aa17.08■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Pcdha11Q91Y19 950 aa17.08■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Tceal6Q9DB24 200 aa17.08■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Gm28897A0A087WP44 222 aa17.08■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Spata31E9QAF0 1014 aa17.08■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Ifi206G3UZV2 921 aa17.08■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Gm8298J3QPI0 401 aa17.08■□□□□ 0.32
Col17a1-201ENSMUST00000026045 MrasO08989 208 aa17.08■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Zw10O54692 779 aa17.08■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Gon7P0C8B4 98 aa17.08■□□□□ 0.32
Col17a1-201ENSMUST00000026045 GzmgP13366 248 aa17.08■□□□□ 0.32
Col17a1-201ENSMUST00000026045 TdgP56581 421 aa17.08■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Serpinb5P70124 375 aaKnown RBP17.08■□□□□ 0.32
Col17a1-201ENSMUST00000026045 KizQ3UXL4 695 aa17.08■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Akap14Q3V0I7 536 aa17.08■□□□□ 0.32
Col17a1-201ENSMUST00000026045 NrcamQ810U4 1256 aa17.08■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Abraxas1Q8BPZ8 407 aa17.08■□□□□ 0.32
Col17a1-201ENSMUST00000026045 BsndQ8VIM4 307 aa17.08■□□□□ 0.32
Col17a1-201ENSMUST00000026045 NfkbiaQ9Z1E3 314 aa17.08■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Arih2Q9Z1K6 492 aa17.08■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Fcer2P20693 331 aa17.07■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Fitm2P59266 262 aa17.07■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Thrap3Q569Z6 951 aaKnown RBP17.07■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Sema5aQ62217 1077 aa17.07■□□□□ 0.32
Col17a1-201ENSMUST00000026045 MaelQ8BVN9 434 aa17.07■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Ccser1Q8C0C4 895 aa17.07■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Pold3Q9EQ28 462 aa17.07■□□□□ 0.32
Col17a1-201ENSMUST00000026045 EloblA6PWE0 161 aa17.07■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Cyp2t4E9PWV0 503 aa17.07■□□□□ 0.32
Col17a1-201ENSMUST00000026045 AfpP02772 605 aa17.07■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Nfe2Q07279 373 aa17.07■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Lpcat4Q6NVG1 524 aa17.07■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Smarcal1Q8BJL0 910 aa17.07■□□□□ 0.32
Col17a1-201ENSMUST00000026045 Setdb2Q8C267 713 aa17.07■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 33.7 ms