RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 YwhaeP62259 255 aaKnown RBP17.31■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Rps6P62754 249 aaKnown RBP17.31■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Mrgprx2Q3UG50 352 aa17.31■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Hspbap1Q8BK58 483 aa17.31■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Fzd10Q8BKG4 582 aa17.31■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Dus2Q9D7B1 493 aa17.31■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Gbp6A0A0G2JDV3 611 aa17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 IsxA1A546 240 aa17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Gm43302L7N1X8 611 aa17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 AvilO88398 819 aa17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Ggnbp1Q6K1E7 370 aa17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Arhgap10Q6Y5D8 786 aa17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Serpina12Q7TMF5 413 aa17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Suds3Q8BR65 328 aa17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Ppp4r1Q8K2V1 951 aa17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Olfr1325Q8VF43 315 aa17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Ndufaf1Q9CWX2 328 aa17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Mapk13Q9Z1B7 366 aa17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Spin2dB1B0R2 236 aa17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Olfr456B2RT27 312 aa17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Inpp5aE9QAS7 422 aa17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 DckP43346 260 aa17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Ncf1Q09014 390 aa17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Sp140Q6NSQ5 534 aa17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Rxfp1Q6R6I7 758 aa17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Pgrmc2Q80UU9 217 aaKnown RBP17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Samd4aQ8CBY1 711 aaKnown RBP17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Ccdc63Q8CDV6 558 aa17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Fbxo33Q8VE08 562 aa17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Olfr458Q8VF80 313 aa17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Olfr457Q8VGP5 313 aa17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Sapcd2Q9D818 391 aa17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Gm12248A0A1W2P8B8 313 aa17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Capn5O08688 640 aaKnown RBP17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 BmxP97504 651 aa17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Spata18Q0P557 537 aa17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Zfp956Q3UZY6 572 aa17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 GapdhsQ64467 440 aa17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Foxb2Q64733 428 aa17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Atxn7l2Q8C8K6 696 aa17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 NeproQ8R2U2 564 aa17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Afg3l1Q920A7 789 aaKnown RBP17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Trpc4apQ9JLV2 797 aa17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Cpsf3Q9QXK7 684 aa17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Gon4lQ9DB00 2260 aa17.3■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Sned1Q70E20 1403 aa17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Vmn2r96E9PZU5 664 aa17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Hsd17b14E9Q3D4 273 aa17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 FaahO08914 579 aa17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Hoxb8P09632 243 aa17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Slc16a9Q7TM99 508 aa17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Gramd1bQ80TI0 738 aa17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Znf598Q80YR4 908 aaKnown RBP17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Clasp2Q8BRT1 1286 aaKnown RBP17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Cops7bQ8BV13 264 aa17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Slc4a8Q8JZR6 1089 aa17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Tspan14Q8QZY6 270 aa17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Ap3m2Q8R2R9 418 aa17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Creld1Q91XD7 420 aa17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 NwcQ9CQI4 244 aa17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Rbp7Q9EPC5 134 aa17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Sec14l5B2RXM5 696 aa17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Znf746Q3U133 652 aa17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Pag1Q3U1F9 429 aa17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Hipk4Q3V016 616 aa17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Wee2Q66JT0 555 aa17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Nomo1Q6GQT9 1214 aaKnown RBP17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Peli3Q8BXR6 445 aa17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Nrn1lQ8C4W3 162 aa17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Xpo5Q924C1 1204 aaKnown RBP17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 NkapQ9D0F4 415 aaKnown RBP17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Mkrn2osD3Z393 217 aa17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Vmn2r2L7N2E9 908 aa17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 DdcO88533 480 aa17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Psmd3P14685 530 aa17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Tgfbrap1Q3UR70 860 aa17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 ScinQ60604 715 aa17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Exoc3l4Q6DIA2 721 aa17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 NaprtQ8CC86 538 aa17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Stau2Q8CJ67 570 aaKnown RBP17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Gsto2Q8K2Q2 248 aa17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Plekhg6Q8R0J1 787 aa17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Vmn1r213Q8R278 384 aa17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Cyp2c70Q91W64 489 aa17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Chrnb2Q9ERK7 501 aa17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Rad18Q9QXK2 509 aaKnown RBP17.29■□□□□ 0.36
Ctcf-201ENSMUST00000005841 D3Z070 196 aa17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Zscan4bE9Q3G0 505 aa17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Larp7Q05CL8 570 aaKnown RBP17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Tfap2cQ61312 449 aa17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Chi3l1Q61362 389 aa17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Pi4kbQ8BKC8 816 aa17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Nmur2Q8BZ39 395 aa17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Sumf1Q8R0F3 372 aa17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Wrap53Q8VC51 532 aa17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Anxa13Q99JG3 317 aa17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 1700016D06RikQ9DAA5 166 aa17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Psmg1Q9JK23 289 aa17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Ifit3bE9PV48 403 aa17.28■□□□□ 0.36
Ctcf-201ENSMUST00000005841 Kbtbd6E9PYD7 486 aa17.28■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 29 ms