RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Arhgap10Q6Y5D8 786 aa16.86■□□□□ 0.29
Shh-201ENSMUST00000002708 Stk40Q7TNL3 435 aa16.86■□□□□ 0.29
Shh-201ENSMUST00000002708 ItchQ8C863 864 aa16.86■□□□□ 0.29
Shh-201ENSMUST00000002708 Slco4a1Q8K078 723 aa16.86■□□□□ 0.29
Shh-201ENSMUST00000002708 Oit3Q8R4V5 546 aa16.86■□□□□ 0.29
Shh-201ENSMUST00000002708 GldcQ91W43 1025 aa16.86■□□□□ 0.29
Shh-201ENSMUST00000002708 Pcdhb6Q91XZ4 772 aa16.86■□□□□ 0.29
Shh-201ENSMUST00000002708 Afg3l1Q920A7 789 aaKnown RBP16.86■□□□□ 0.29
Shh-201ENSMUST00000002708 Rec114Q9CWH4 259 aa16.86■□□□□ 0.29
Shh-201ENSMUST00000002708 Clic3Q9D7P7 237 aa16.86■□□□□ 0.29
Shh-201ENSMUST00000002708 PolkQ9QUG2 852 aa16.86■□□□□ 0.29
Shh-201ENSMUST00000002708 PigqQ9QYT7 581 aa16.86■□□□□ 0.29
Shh-201ENSMUST00000002708 PapolbQ9WVP6 641 aa16.86■□□□□ 0.29
Shh-201ENSMUST00000002708 PiggD3Z3Y1 983 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 AlbP07724 608 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 CstaP56567 97 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 Msx3P70354 204 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 Psmb4P99026 264 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 Nfe2Q07279 373 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 Aldh1a2Q62148 518 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 DgkqQ6P5E8 934 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 Gstm4Q8R5I6 218 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 Atp6v1b1Q91YH6 513 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 PmpcbQ9CXT8 489 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 Ube4bQ9ES00 1173 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 ThadaA8C756 1938 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 Usp34Q6ZQ93 3582 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 Smok3cA0A087WSF2 504 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 Gm6657A0A1B0GRJ3 277 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 Gm6205E9PZS2 359 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 Acot1O55137 419 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 DcxO88809 366 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 P01650 108 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 P01653 108 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 Myl4P09541 193 aaKnown RBP16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 Dnmt3cP0DOY1 709 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 Adcy6Q01341 1165 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 TchpQ3TVW5 497 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 Mrgprb1Q3UG61 350 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 PigaQ64323 485 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 ProcrQ64695 242 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 Sort1Q6PHU5 825 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 Eif4bQ8BGD9 611 aaKnown RBP16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 Echs1Q8BH95 290 aaKnown RBP16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 Gbp9Q8BTS3 619 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 Gm6367Q8C6L9 287 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 Scara3Q8C850 606 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 Gsto2Q8K2Q2 248 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 Tmem82Q8R115 356 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 Itm2cQ91VK4 269 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 SmtnQ921U8 923 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 Ubxn2aQ99KJ0 258 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 Trem2Q99NH8 227 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 Klhl35Q9CZ49 574 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 Acbd6Q9D061 282 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 Plin3Q9DBG5 437 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 Stap1Q9JM90 297 aaKnown RBP16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 GghQ9Z0L8 317 aa16.85■□□□□ 0.29
Shh-201ENSMUST00000002708 ZxdbA2CE44 873 aa16.84■□□□□ 0.29
Shh-201ENSMUST00000002708 Adam15O88839 864 aa16.84■□□□□ 0.29
Shh-201ENSMUST00000002708 Ccnd1P25322 295 aa16.84■□□□□ 0.29
Shh-201ENSMUST00000002708 RgnQ64374 299 aa16.84■□□□□ 0.29
Shh-201ENSMUST00000002708 Olfr389Q7TRX7 312 aa16.84■□□□□ 0.29
Shh-201ENSMUST00000002708 Fbxw21Q8BI38 468 aa16.84■□□□□ 0.29
Shh-201ENSMUST00000002708 Robo4Q8C310 1012 aa16.84■□□□□ 0.29
Shh-201ENSMUST00000002708 VcpkmtQ8C436 228 aa16.84■□□□□ 0.29
Shh-201ENSMUST00000002708 Vmn1r213Q8R278 384 aa16.84■□□□□ 0.29
Shh-201ENSMUST00000002708 Tmco4Q91WU4 631 aa16.84■□□□□ 0.29
Shh-201ENSMUST00000002708 Grk2Q99MK8 689 aa16.84■□□□□ 0.29
Shh-201ENSMUST00000002708 Elp3Q9CZX0 547 aa16.84■□□□□ 0.29
Shh-201ENSMUST00000002708 Fibcd1A2AV25 459 aa16.84■□□□□ 0.29
Shh-201ENSMUST00000002708 Ttll8A4Q9F1 832 aa16.84■□□□□ 0.29
Shh-201ENSMUST00000002708 Maml3D4QGC2 1135 aa16.84■□□□□ 0.29
Shh-201ENSMUST00000002708 Gm3187M0QWW3 260 aa16.84■□□□□ 0.29
Shh-201ENSMUST00000002708 Akap1O08715 857 aaKnown RBP16.84■□□□□ 0.29
Shh-201ENSMUST00000002708 Rb1P13405 921 aa16.84■□□□□ 0.29
Shh-201ENSMUST00000002708 Mmp3P28862 477 aa16.84■□□□□ 0.29
Shh-201ENSMUST00000002708 Asprv1Q09PK2 339 aa16.84■□□□□ 0.29
Shh-201ENSMUST00000002708 Rbm20Q3UQS8 1199 aaKnown RBP16.84■□□□□ 0.29
Shh-201ENSMUST00000002708 Srrm1Q52KI8 946 aaKnown RBP16.84■□□□□ 0.29
Shh-201ENSMUST00000002708 CybbQ61093 570 aa16.84■□□□□ 0.29
Shh-201ENSMUST00000002708 Ubxn7Q6P5G6 467 aa16.84■□□□□ 0.29
Shh-201ENSMUST00000002708 Abhd10Q6PE15 297 aa16.84■□□□□ 0.29
Shh-201ENSMUST00000002708 Cys1Q8R4T1 145 aa16.84■□□□□ 0.29
Shh-201ENSMUST00000002708 Ak5Q920P5 562 aa16.84■□□□□ 0.29
Shh-201ENSMUST00000002708 Thg1lQ9CY52 298 aa16.84■□□□□ 0.29
Shh-201ENSMUST00000002708 CabyrQ9D424 453 aa16.84■□□□□ 0.29
Shh-201ENSMUST00000002708 Acox2Q9QXD1 681 aa16.84■□□□□ 0.29
Shh-201ENSMUST00000002708 Tmigd3G3X8R9 209 aa16.83■□□□□ 0.29
Shh-201ENSMUST00000002708 BpgmP15327 259 aa16.83■□□□□ 0.29
Shh-201ENSMUST00000002708 Rab17P35292 214 aa16.83■□□□□ 0.29
Shh-201ENSMUST00000002708 Rpl5P47962 297 aaKnown RBP16.83■□□□□ 0.29
Shh-201ENSMUST00000002708 Slc12a1P55014 1095 aa16.83■□□□□ 0.29
Shh-201ENSMUST00000002708 Serpina6Q06770 397 aa16.83■□□□□ 0.29
Shh-201ENSMUST00000002708 Faf2Q3TDN2 445 aa16.83■□□□□ 0.29
Shh-201ENSMUST00000002708 Ankrd6Q69ZU8 712 aa16.83■□□□□ 0.29
Shh-201ENSMUST00000002708 Arl5cQ6P068 179 aa16.83■□□□□ 0.29
Shh-201ENSMUST00000002708 PoliQ6R3M4 717 aa16.83■□□□□ 0.29
Shh-201ENSMUST00000002708 Fzd10Q8BKG4 582 aa16.83■□□□□ 0.29
Shh-201ENSMUST00000002708 Washc5Q8C2E7 1159 aaKnown RBP16.83■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 47.6 ms