RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 TPH2Q8IWU9 490 aa4.42□□□□□ -1.7
SCN3A-209ENST00000639244 MICU2Q8IYU8 434 aa4.42□□□□□ -1.7
SCN3A-209ENST00000639244 MYCT1Q8N699 235 aa4.42□□□□□ -1.7
SCN3A-209ENST00000639244 ASCC1Q8N9N2 400 aaKnown RBP4.42□□□□□ -1.7
SCN3A-209ENST00000639244 SLC2A14Q8TDB8 520 aa4.42□□□□□ -1.7
SCN3A-209ENST00000639244 TTC9Q92623 222 aa4.42□□□□□ -1.7
SCN3A-209ENST00000639244 EXT2Q93063 718 aa4.42□□□□□ -1.7
SCN3A-209ENST00000639244 RBM42Q9BTD8 480 aaKnown RBP4.42□□□□□ -1.7
SCN3A-209ENST00000639244 OSBPL6Q9BZF3 934 aa4.42□□□□□ -1.7
SCN3A-209ENST00000639244 PADI4Q9UM07 663 aa4.42□□□□□ -1.7
SCN3A-209ENST00000639244 ARHGEF9O43307 516 aa4.42□□□□□ -1.7
SCN3A-209ENST00000639244 POLBP06746 335 aa4.42□□□□□ -1.7
SCN3A-209ENST00000639244 HOXA11P31270 313 aaPredicted RBP4.42□□□□□ -1.7
SCN3A-209ENST00000639244 SEC23AQ15436 765 aa4.42□□□□□ -1.7
SCN3A-209ENST00000639244 ZNF674Q2M3X9 581 aa4.42□□□□□ -1.7
SCN3A-209ENST00000639244 SCYL2Q6P3W7 929 aa4.42□□□□□ -1.7
SCN3A-209ENST00000639244 SYCE2Q6PIF2 218 aa4.42□□□□□ -1.7
SCN3A-209ENST00000639244 SMIM15Q7Z3B0 74 aa4.42□□□□□ -1.7
SCN3A-209ENST00000639244 LINC00518Q8N0U6 118 aa4.42□□□□□ -1.7
SCN3A-209ENST00000639244 OR6B3Q8NGW1 331 aa4.42□□□□□ -1.7
SCN3A-209ENST00000639244 SYN2Q92777 582 aaPredicted RBP4.42□□□□□ -1.7
SCN3A-209ENST00000639244 C12orf57Q99622 126 aa4.42□□□□□ -1.7
SCN3A-209ENST00000639244 ZNF408Q9H9D4 720 aa4.42□□□□□ -1.7
SCN3A-209ENST00000639244 NT5MQ9NPB1 228 aa4.42□□□□□ -1.7
SCN3A-209ENST00000639244 CMTM6Q9NX76 183 aa4.42□□□□□ -1.7
SCN3A-209ENST00000639244 TOR4AQ9NXH8 423 aa4.42□□□□□ -1.7
SCN3A-209ENST00000639244 PSMC3IPQ9P2W1 217 aaPredicted RBP4.42□□□□□ -1.7
SCN3A-209ENST00000639244 ZNF608Q9ULD9 1512 aaPredicted RBP4.42□□□□□ -1.7
SCN3A-209ENST00000639244 SPEF2Q9C093 1822 aa4.42□□□□□ -1.7
SCN3A-209ENST00000639244 ZBBXA8MT70 800 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 AIM2O14862 343 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 SLC22A1O15245 554 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 PRPF6O94906 941 aaKnown RBP4.41□□□□□ -1.7
SCN3A-209ENST00000639244 HOXD13P35453 343 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 EMC2Q15006 297 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 GNASQ5JWF2 1037 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 DPP8Q6V1X1 898 aaPredicted RBP4.41□□□□□ -1.7
SCN3A-209ENST00000639244 PSTKQ8IV42 348 aaKnown RBP4.41□□□□□ -1.7
SCN3A-209ENST00000639244 DCP1BQ8IZD4 617 aaKnown RBP4.41□□□□□ -1.7
SCN3A-209ENST00000639244 PPP1R2P1Q96PQ5 205 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 AGPAT5Q9NUQ2 364 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 SNX14Q9Y5W7 946 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 PRDM15P57071 1507 aaPredicted RBP4.41□□□□□ -1.7
SCN3A-209ENST00000639244 PHF2O75151 1096 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 APOA1P02647 267 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 G0S2P27469 103 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 GARSP41250 739 aaKnown RBP4.41□□□□□ -1.7
SCN3A-209ENST00000639244 DSG1Q02413 1049 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 DSC2Q02487 901 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 KRT81Q14533 505 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 MPP7Q5T2T1 576 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 ARHGEF16Q5VV41 709 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 TTC33Q6PID6 262 aaPredicted RBP4.41□□□□□ -1.7
SCN3A-209ENST00000639244 ARSKQ6UWY0 536 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 MCEMP1Q8IX19 187 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 TRIM54Q9BYV2 358 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 MLXIPLQ9NP71 852 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 TAS2R3Q9NYW6 316 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 POLIQ9UNA4 740 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 DOLKQ9UPQ8 538 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 EIF4E1BA6NMX2 242 aaKnown RBP4.41□□□□□ -1.7
SCN3A-209ENST00000639244 KRT36O76013 467 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 STAU1O95793 577 aaKnown RBP4.41□□□□□ -1.7
SCN3A-209ENST00000639244 TM4SF4P48230 202 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 ARHGDIAP52565 204 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 ARHGAP4P98171 946 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 REEP5Q00765 189 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 ABRQ12979 859 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 TIGD2Q4W5G0 525 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 ATG16L1Q676U5 607 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 BHLHB9Q6PI77 547 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 PTCHD4Q6ZW05 846 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 USP37Q86T82 979 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 FAM109AQ8N4B1 249 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 CATSPER1Q8NEC5 780 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 DNAJB8Q8NHS0 232 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 PURBQ96QR8 312 aaKnown RBP4.41□□□□□ -1.7
SCN3A-209ENST00000639244 AGAP2Q99490 1192 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 PAPOLGQ9BWT3 736 aaKnown RBP4.41□□□□□ -1.7
SCN3A-209ENST00000639244 SLC12A4Q9UP95 1085 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 PIAS3Q9Y6X2 628 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 BACH1O14867 736 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 PCDH17O14917 1159 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 JRKO75564 520 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 PLCG1P19174 1290 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 SHMT1P34896 483 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 YAP1P46937 504 aaKnown RBP4.41□□□□□ -1.7
SCN3A-209ENST00000639244 ATP1A2P50993 1020 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 C16orf72Q14CZ0 275 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 RRS1Q15050 365 aaKnown RBP4.41□□□□□ -1.7
SCN3A-209ENST00000639244 EDRF1Q3B7T1 1238 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 BRINP3Q76B58 766 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 KCNK18Q7Z418 384 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 CEP97Q8IW35 865 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 MPP5Q8N3R9 675 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 PIK3R3Q92569 461 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 HSPBAP1Q96EW2 488 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 SLC4A9Q96Q91 983 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 SEC22CQ9BRL7 303 aa4.41□□□□□ -1.7
SCN3A-209ENST00000639244 DMRT1Q9Y5R6 373 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms