RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 DCXO43602 365 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 STK10O94804 968 aaKnown RBP11.23□□□□□ -0.61
SNIP1-204ENST00000638725 OR6B1O95007 311 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 IL18RAPO95256 599 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 IQCF3P0C7M6 154 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 HDAC4P56524 1084 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 SESN2P58004 480 aaPredicted RBP11.23□□□□□ -0.61
SNIP1-204ENST00000638725 SEMA5AQ13591 1074 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 GOLGA7BQ2TAP0 167 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 GRAMD1BQ3KR37 738 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 STXBP5Q5T5C0 1151 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 BSPRYQ5W0U4 402 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 STEAP4Q687X5 459 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 PMF1Q6P1K2 205 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 LCLAT1Q6UWP7 414 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 SATL1Q86VE3 508 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 NETO2Q8NC67 525 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 ACMSDQ8TDX5 336 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 KHSRPQ92945 711 aaKnown RBP eCLIP11.23□□□□□ -0.61
SNIP1-204ENST00000638725 HPDLQ96IR7 371 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 HAPLN3Q96S86 360 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 DHX35Q9H5Z1 703 aaKnown RBP11.23□□□□□ -0.61
SNIP1-204ENST00000638725 MAN1C1Q9NR34 630 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 PICK1Q9NRD5 415 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 SLC4A7Q9Y6M7 1214 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 DOCK1Q14185 1865 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 H3BNX3 289 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 DPYSL4O14531 572 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 PABPC4LP0CB38 370 aaKnown RBP11.23□□□□□ -0.61
SNIP1-204ENST00000638725 STAG3L1P0CL83 205 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 CLCN3P51790 818 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 ABCE1P61221 599 aaKnown RBP11.23□□□□□ -0.61
SNIP1-204ENST00000638725 USP4Q13107 963 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 ITGA9Q13797 1035 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 GRM2Q14416 872 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 PDK3Q15120 406 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 STILQ15468 1287 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 HEATR6Q6AI08 1181 aaKnown RBP11.23□□□□□ -0.61
SNIP1-204ENST00000638725 ISLR2Q6UXK2 745 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 SAMD7Q7Z3H4 446 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 ARHGAP22Q7Z5H3 698 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 SCUBE3Q8IX30 993 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 NAT14Q8WUY8 206 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 CMTM5Q96DZ9 223 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 C12orf42Q96LP6 360 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 PPP1R16BQ96T49 567 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 B3GNT5Q9BYG0 378 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 CYP3A43Q9HB55 503 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 IFT122Q9HBG6 1241 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 COPG2Q9UBF2 871 aa11.23□□□□□ -0.61
SNIP1-204ENST00000638725 BARX2Q9UMQ3 279 aaPredicted RBP11.23□□□□□ -0.61
SNIP1-204ENST00000638725 IGKV6-21A0A0C4DH24 114 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 MDM4O15151 490 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 ZBTB14O43829 449 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 ALDH1A2O94788 518 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 PGM3O95394 542 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 ITGA2BP08514 1039 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 RALBP11234 206 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 PIM1P11309 404 aaPredicted RBP11.22□□□□□ -0.61
SNIP1-204ENST00000638725 VAV1P15498 845 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 MGAT1P26572 445 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 LSAMPQ13449 338 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 PDCD2Q16342 344 aaPredicted RBP11.22□□□□□ -0.61
SNIP1-204ENST00000638725 C4orf22Q6V702 233 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 FBXW8Q8N3Y1 598 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 NME8Q8N427 588 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 ATP2A3Q93084 1043 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 FAM167AQ96KS9 214 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 PGLYRP2Q96PD5 576 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 QKIQ96PU8 341 aaKnown RBP eCLIP11.22□□□□□ -0.61
SNIP1-204ENST00000638725 GCNAQ96QF7 691 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 TBCBQ99426 244 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 GCOM2Q9BZD3 368 aaPredicted RBP11.22□□□□□ -0.61
SNIP1-204ENST00000638725 MIS12Q9H081 205 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 HACL1Q9UJ83 578 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 COMMD3-BMI1R4GMX3 469 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 CAPN8A6NHC0 703 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 E9PBE3 544 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 KLHL41O60662 606 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 F7P08709 466 aaPredicted RBP11.22□□□□□ -0.61
SNIP1-204ENST00000638725 COX4I1P13073 169 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 CD1EP15812 388 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 ALOX15P16050 662 aaPredicted RBP11.22□□□□□ -0.61
SNIP1-204ENST00000638725 MBTD1Q05BQ5 628 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 HSDL1Q3SXM5 330 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 ANKRD20A4Q4UJ75 823 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 PPP1R26Q5T8A7 1209 aaPredicted RBP11.22□□□□□ -0.61
SNIP1-204ENST00000638725 CES3Q6UWW8 571 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 METTL7BQ6UX53 244 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 CMC1Q7Z7K0 106 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 TTC30AQ86WT1 665 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 B4GALNT2Q8NHY0 566 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 CDKL2Q92772 493 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 EZH1Q92800 747 aaPredicted RBP11.22□□□□□ -0.61
SNIP1-204ENST00000638725 CEP41Q9BYV8 373 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 HESX1Q9UBX0 185 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 DCDC2Q9UHG0 476 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 TNFSF13BQ9Y275 285 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 C15orf38-AP3S2A0A0A6YYH1 394 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 PAPSS1O43252 624 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms