RNA–Protein interactions for RNA: ENST00000638264.1

TARDBP-229, Transcript of TAR DNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene TARDBP, Length 774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-229ENST00000638264 SMARCD2Q92925 531 aa12.06□□□□□ -0.48
TARDBP-229ENST00000638264 FAF2Q96CS3 445 aa12.06□□□□□ -0.48
TARDBP-229ENST00000638264 SLC22A12Q96S37 553 aa12.06□□□□□ -0.48
TARDBP-229ENST00000638264 CYP2S1Q96SQ9 504 aa12.06□□□□□ -0.48
TARDBP-229ENST00000638264 FRMD8P1Q9BZ68 369 aaPredicted RBP12.06□□□□□ -0.48
TARDBP-229ENST00000638264 RAB6CQ9H0N0 254 aa12.06□□□□□ -0.48
TARDBP-229ENST00000638264 PCDH18Q9HCL0 1135 aa12.06□□□□□ -0.48
TARDBP-229ENST00000638264 HOMER3Q9NSC5 361 aa12.06□□□□□ -0.48
TARDBP-229ENST00000638264 MTMR10Q9NXD2 777 aa12.06□□□□□ -0.48
TARDBP-229ENST00000638264 DENND4CQ5VZ89 1909 aa12.05□□□□□ -0.48
TARDBP-229ENST00000638264 CHD9Q3L8U1 2897 aa12.05□□□□□ -0.48
TARDBP-229ENST00000638264 C3orf70A6NLC5 250 aaPredicted RBP12.05□□□□□ -0.48
TARDBP-229ENST00000638264 LEFTY2O00292 366 aa12.05□□□□□ -0.48
TARDBP-229ENST00000638264 FANCGO15287 622 aa12.05□□□□□ -0.48
TARDBP-229ENST00000638264 FGF10O15520 208 aaPredicted RBP12.05□□□□□ -0.48
TARDBP-229ENST00000638264 CEP104O60308 925 aa12.05□□□□□ -0.48
TARDBP-229ENST00000638264 ZNF189O75820 626 aaPredicted RBP12.05□□□□□ -0.48
TARDBP-229ENST00000638264 URI1O94763 535 aaPredicted RBP12.05□□□□□ -0.48
TARDBP-229ENST00000638264 HMBSP08397 361 aa12.05□□□□□ -0.48
TARDBP-229ENST00000638264 PYGMP11217 842 aa12.05□□□□□ -0.48
TARDBP-229ENST00000638264 CORO1AP31146 461 aaKnown RBP12.05□□□□□ -0.48
TARDBP-229ENST00000638264 HOXC13P31276 330 aa12.05□□□□□ -0.48
TARDBP-229ENST00000638264 GJC1P36383 396 aa12.05□□□□□ -0.48
TARDBP-229ENST00000638264 CDKN2BP42772 138 aa12.05□□□□□ -0.48
TARDBP-229ENST00000638264 MARCKSL1P49006 195 aa12.05□□□□□ -0.48
TARDBP-229ENST00000638264 KCNQ1P51787 676 aa12.05□□□□□ -0.48
TARDBP-229ENST00000638264 DLX2Q07687 328 aaPredicted RBP12.05□□□□□ -0.48
TARDBP-229ENST00000638264 USP4Q13107 963 aa12.05□□□□□ -0.48
TARDBP-229ENST00000638264 SMAD4Q13485 552 aaKnown RBP12.05□□□□□ -0.48
TARDBP-229ENST00000638264 DPYSL3Q14195 570 aa12.05□□□□□ -0.48
TARDBP-229ENST00000638264 CBX2Q14781 532 aaPredicted RBP12.05□□□□□ -0.48
TARDBP-229ENST00000638264 C5orf22Q49AR2 442 aa12.05□□□□□ -0.48
TARDBP-229ENST00000638264 ATP13A4Q4VNC1 1196 aa12.05□□□□□ -0.48
TARDBP-229ENST00000638264 CCDC181Q5TID7 509 aa12.05□□□□□ -0.48
TARDBP-229ENST00000638264 DCAF12L1Q5VU92 463 aa12.05□□□□□ -0.48
TARDBP-229ENST00000638264 BZW1Q7L1Q6 419 aaKnown RBP12.05□□□□□ -0.48
TARDBP-229ENST00000638264 OTOP3Q7RTS5 596 aa12.05□□□□□ -0.48
TARDBP-229ENST00000638264 FAM217AQ8IXS0 508 aa12.05□□□□□ -0.48
TARDBP-229ENST00000638264 CPXM2Q8N436 756 aa12.05□□□□□ -0.48
TARDBP-229ENST00000638264 TTC13Q8NBP0 860 aa12.05□□□□□ -0.48
TARDBP-229ENST00000638264 ZSCAN18Q8TBC5 510 aaPredicted RBP12.05□□□□□ -0.48
TARDBP-229ENST00000638264 SH3RF2Q8TEC5 729 aa12.05□□□□□ -0.48
TARDBP-229ENST00000638264 TSC1Q92574 1164 aa12.05□□□□□ -0.48
TARDBP-229ENST00000638264 USP13Q92995 863 aaPredicted RBP12.05□□□□□ -0.48
TARDBP-229ENST00000638264 HLA-CQ95604 372 aa12.05□□□□□ -0.48
TARDBP-229ENST00000638264 ASB16Q96NS5 453 aa12.05□□□□□ -0.48
TARDBP-229ENST00000638264 GUCD1Q96NT3 240 aa12.05□□□□□ -0.48
TARDBP-229ENST00000638264 RNF157Q96PX1 679 aa12.05□□□□□ -0.48
TARDBP-229ENST00000638264 CALN1Q9BXU9 219 aa12.05□□□□□ -0.48
TARDBP-229ENST00000638264 OSBPL8Q9BZF1 889 aa12.05□□□□□ -0.48
TARDBP-229ENST00000638264 CATSPERBQ9H7T0 1116 aa12.05□□□□□ -0.48
TARDBP-229ENST00000638264 UBE2ZQ9H832 354 aaPredicted RBP12.05□□□□□ -0.48
TARDBP-229ENST00000638264 GKN1Q9NS71 199 aa12.05□□□□□ -0.48
TARDBP-229ENST00000638264 FAM50BQ9Y247 325 aa12.05□□□□□ -0.48
TARDBP-229ENST00000638264 HS3ST4Q9Y661 456 aa12.05□□□□□ -0.48
TARDBP-229ENST00000638264 OBSL1O75147 1896 aa12.05□□□□□ -0.48
TARDBP-229ENST00000638264 NOTCH4Q99466 2003 aa12.04□□□□□ -0.48
TARDBP-229ENST00000638264 IGLV3-10A0A075B6K4 115 aa12.04□□□□□ -0.48
TARDBP-229ENST00000638264 hCG_1818297A0A087WSY0 165 aa12.04□□□□□ -0.48
TARDBP-229ENST00000638264 TYW5A2RUC4 315 aaKnown RBP12.04□□□□□ -0.48
TARDBP-229ENST00000638264 WASH4PA8MWX3 477 aa12.04□□□□□ -0.48
TARDBP-229ENST00000638264 F5H5T6 163 aa12.04□□□□□ -0.48
TARDBP-229ENST00000638264 PGRMC1O00264 195 aaKnown RBP12.04□□□□□ -0.48
TARDBP-229ENST00000638264 EEF2KO00418 725 aaKnown RBP12.04□□□□□ -0.48
TARDBP-229ENST00000638264 DAPK3O43293 454 aa12.04□□□□□ -0.48
TARDBP-229ENST00000638264 GREM1O60565 184 aa12.04□□□□□ -0.48
TARDBP-229ENST00000638264 MOCS2O96007 188 aaPredicted RBP12.04□□□□□ -0.48
TARDBP-229ENST00000638264 DNA2P51530 1060 aa12.04□□□□□ -0.48
TARDBP-229ENST00000638264 TPI1P60174 286 aa12.04□□□□□ -0.48
TARDBP-229ENST00000638264 AUHQ13825 339 aaKnown RBP12.04□□□□□ -0.48
TARDBP-229ENST00000638264 ZNF77Q15935 545 aa12.04□□□□□ -0.48
TARDBP-229ENST00000638264 ANKRD20A8PQ5CZ79 823 aa12.04□□□□□ -0.48
TARDBP-229ENST00000638264 PPP6R3Q5H9R7 873 aaPredicted RBP12.04□□□□□ -0.48
TARDBP-229ENST00000638264 MS4A13Q5J8X5 152 aa12.04□□□□□ -0.48
TARDBP-229ENST00000638264 RABGAP1LQ5R372 815 aa12.04□□□□□ -0.48
TARDBP-229ENST00000638264 MPP7Q5T2T1 576 aa12.04□□□□□ -0.48
TARDBP-229ENST00000638264 STXBP5Q5T5C0 1151 aa12.04□□□□□ -0.48
TARDBP-229ENST00000638264 MANEALQ5VSG8 457 aa12.04□□□□□ -0.48
TARDBP-229ENST00000638264 MFSD7Q6UXD7 560 aa12.04□□□□□ -0.48
TARDBP-229ENST00000638264 RFX8Q6ZV50 586 aa12.04□□□□□ -0.48
TARDBP-229ENST00000638264 BBS12Q6ZW61 710 aa12.04□□□□□ -0.48
TARDBP-229ENST00000638264 GET4Q7L5D6 327 aaPredicted RBP12.04□□□□□ -0.48
TARDBP-229ENST00000638264 SLC13A5Q86YT5 568 aaPredicted RBP12.04□□□□□ -0.48
TARDBP-229ENST00000638264 DENND1CQ8IV53 801 aa12.04□□□□□ -0.48
TARDBP-229ENST00000638264 LZTR1Q8N653 840 aa12.04□□□□□ -0.48
TARDBP-229ENST00000638264 ZNF557Q8N988 423 aaPredicted RBP12.04□□□□□ -0.48
TARDBP-229ENST00000638264 MNS1Q8NEH6 495 aa12.04□□□□□ -0.48
TARDBP-229ENST00000638264 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.04□□□□□ -0.48
TARDBP-229ENST00000638264 ADAMTS19Q8TE59 1207 aa12.04□□□□□ -0.48
TARDBP-229ENST00000638264 RNF25Q96BH1 459 aaPredicted RBP12.04□□□□□ -0.48
TARDBP-229ENST00000638264 ACSF2Q96CM8 615 aaPredicted RBP12.04□□□□□ -0.48
TARDBP-229ENST00000638264 TBC1D31Q96DN5 1066 aa12.04□□□□□ -0.48
TARDBP-229ENST00000638264 RPGRIP1Q96KN7 1286 aa12.04□□□□□ -0.48
TARDBP-229ENST00000638264 CSPG4P5Q96PW8 444 aa12.04□□□□□ -0.48
TARDBP-229ENST00000638264 KCTD15Q96SI1 283 aaPredicted RBP12.04□□□□□ -0.48
TARDBP-229ENST00000638264 PRMT1Q99873 361 aaKnown RBP12.04□□□□□ -0.48
TARDBP-229ENST00000638264 ZFP14Q9HCL3 533 aa12.04□□□□□ -0.48
TARDBP-229ENST00000638264 ANLNQ9NQW6 1124 aa12.04□□□□□ -0.48
TARDBP-229ENST00000638264 THG1LQ9NWX6 298 aaKnown RBP12.04□□□□□ -0.48
TARDBP-229ENST00000638264 SMPD4Q9NXE4 827 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms