RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 RIMS3Q9UJD0 308 aa16.01■□□□□ 0.15
CACNA1A-235ENST00000637004 PCDHGB4Q9UN71 923 aa16.01■□□□□ 0.15
CACNA1A-235ENST00000637004 PCDHGB5Q9Y5G0 923 aa16.01■□□□□ 0.15
CACNA1A-235ENST00000637004 PCDHA11Q9Y5I1 949 aa16.01■□□□□ 0.15
CACNA1A-235ENST00000637004 H3BSA7 217 aa16■□□□□ 0.15
CACNA1A-235ENST00000637004 K7ERI5 159 aa16■□□□□ 0.15
CACNA1A-235ENST00000637004 CST3P01034 146 aaPredicted RBP16■□□□□ 0.15
CACNA1A-235ENST00000637004 MAGEA3P43357 314 aa16■□□□□ 0.15
CACNA1A-235ENST00000637004 DACT2Q5SW24 774 aa16■□□□□ 0.15
CACNA1A-235ENST00000637004 KLHL35Q6PF15 583 aa16■□□□□ 0.15
CACNA1A-235ENST00000637004 TRIM67Q6ZTA4 783 aa16■□□□□ 0.15
CACNA1A-235ENST00000637004 DLG3Q92796 817 aa16■□□□□ 0.15
CACNA1A-235ENST00000637004 TAAR1Q96RJ0 339 aa16■□□□□ 0.15
CACNA1A-235ENST00000637004 STAU2Q9NUL3 570 aaKnown RBP eCLIP16■□□□□ 0.15
CACNA1A-235ENST00000637004 FAF1Q9UNN5 650 aaPredicted RBP16■□□□□ 0.15
CACNA1A-235ENST00000637004 COL2A1P02458 1487 aaPredicted RBP16■□□□□ 0.15
CACNA1A-235ENST00000637004 STBD1O95210 358 aa16■□□□□ 0.15
CACNA1A-235ENST00000637004 MRPS22P82650 360 aaKnown RBP16■□□□□ 0.15
CACNA1A-235ENST00000637004 INSCQ1MX18 579 aa16■□□□□ 0.15
CACNA1A-235ENST00000637004 SH3D19Q5HYK7 790 aa16■□□□□ 0.15
CACNA1A-235ENST00000637004 VWA5B1Q5TIE3 1220 aa16■□□□□ 0.15
CACNA1A-235ENST00000637004 C10orf107Q8IVU9 208 aa16■□□□□ 0.15
CACNA1A-235ENST00000637004 ZBTB8BQ8NAP8 495 aaPredicted RBP16■□□□□ 0.15
CACNA1A-235ENST00000637004 KCNN1Q92952 543 aa16■□□□□ 0.15
CACNA1A-235ENST00000637004 RMI1Q9H9A7 625 aa16■□□□□ 0.15
CACNA1A-235ENST00000637004 BCLAF3A2AJT9 711 aaKnown RBP16■□□□□ 0.15
CACNA1A-235ENST00000637004 E9PBE3 544 aa16■□□□□ 0.15
CACNA1A-235ENST00000637004 TRPA1O75762 1119 aa16■□□□□ 0.15
CACNA1A-235ENST00000637004 ATG7O95352 703 aa16■□□□□ 0.15
CACNA1A-235ENST00000637004 RALBP11234 206 aa16■□□□□ 0.15
CACNA1A-235ENST00000637004 CD19P15391 556 aa16■□□□□ 0.15
CACNA1A-235ENST00000637004 NUDT2P50583 147 aa16■□□□□ 0.15
CACNA1A-235ENST00000637004 MYL6P60660 151 aa16■□□□□ 0.15
CACNA1A-235ENST00000637004 C6orf52Q5T4I8 152 aa16■□□□□ 0.15
CACNA1A-235ENST00000637004 SAMD7Q7Z3H4 446 aa16■□□□□ 0.15
CACNA1A-235ENST00000637004 WDR49Q8IV35 697 aa16■□□□□ 0.15
CACNA1A-235ENST00000637004 BBS5Q8N3I7 341 aa16■□□□□ 0.15
CACNA1A-235ENST00000637004 KYQ8NBH2 561 aa16■□□□□ 0.15
CACNA1A-235ENST00000637004 DEPTORQ8TB45 409 aa16■□□□□ 0.15
CACNA1A-235ENST00000637004 CDKL2Q92772 493 aa16■□□□□ 0.15
CACNA1A-235ENST00000637004 BIRC8Q96P09 236 aa16■□□□□ 0.15
CACNA1A-235ENST00000637004 RNF157Q96PX1 679 aa16■□□□□ 0.15
CACNA1A-235ENST00000637004 INO80BQ9C086 356 aaPredicted RBP16■□□□□ 0.15
CACNA1A-235ENST00000637004 MOCS1Q9NZB8 636 aa16■□□□□ 0.15
CACNA1A-235ENST00000637004 VPS28Q9UK41 221 aa16■□□□□ 0.15
CACNA1A-235ENST00000637004 PAIP2BQ9ULR5 123 aaKnown RBP16■□□□□ 0.15
CACNA1A-235ENST00000637004 ZNF23P17027 643 aa15.99■□□□□ 0.15
CACNA1A-235ENST00000637004 PSMC3P17980 439 aa15.99■□□□□ 0.15
CACNA1A-235ENST00000637004 MX2P20592 715 aa15.99■□□□□ 0.15
CACNA1A-235ENST00000637004 RBL1P28749 1068 aa15.99■□□□□ 0.15
CACNA1A-235ENST00000637004 CAP2P40123 477 aa15.99■□□□□ 0.15
CACNA1A-235ENST00000637004 CDK9P50750 372 aaKnown RBP15.99■□□□□ 0.15
CACNA1A-235ENST00000637004 CBX3Q13185 183 aa15.99■□□□□ 0.15
CACNA1A-235ENST00000637004 PDE1CQ14123 709 aaPredicted RBP15.99■□□□□ 0.15
CACNA1A-235ENST00000637004 BNC2Q6ZN30 1099 aaPredicted RBP15.99■□□□□ 0.15
CACNA1A-235ENST00000637004 XYLT1Q86Y38 959 aa15.99■□□□□ 0.15
CACNA1A-235ENST00000637004 TRIML2Q8N7C3 387 aa15.99■□□□□ 0.15
CACNA1A-235ENST00000637004 TSPAN14Q8NG11 270 aa15.99■□□□□ 0.15
CACNA1A-235ENST00000637004 SNRNP27Q8WVK2 155 aaKnown RBP15.99■□□□□ 0.15
CACNA1A-235ENST00000637004 TARS2Q9BW92 718 aaKnown RBP15.99■□□□□ 0.15
CACNA1A-235ENST00000637004 COPS7BQ9H9Q2 264 aaPredicted RBP15.99■□□□□ 0.15
CACNA1A-235ENST00000637004 COPG2Q9UBF2 871 aa15.99■□□□□ 0.15
CACNA1A-235ENST00000637004 TJP2Q9UDY2 1190 aa15.99■□□□□ 0.15
CACNA1A-235ENST00000637004 CNOT11Q9UKZ1 510 aaKnown RBP15.99■□□□□ 0.15
CACNA1A-235ENST00000637004 SQORQ9Y6N5 450 aa15.99■□□□□ 0.15
CACNA1A-235ENST00000637004 FER1L6Q2WGJ9 1857 aa15.99■□□□□ 0.15
CACNA1A-235ENST00000637004 SCN9AQ15858 1988 aa15.99■□□□□ 0.15
CACNA1A-235ENST00000637004 FZD9O00144 591 aa15.99■□□□□ 0.15
CACNA1A-235ENST00000637004 TPP1O14773 563 aa15.99■□□□□ 0.15
CACNA1A-235ENST00000637004 ZBTB14O43829 449 aa15.99■□□□□ 0.15
CACNA1A-235ENST00000637004 PSAPP07602 524 aa15.99■□□□□ 0.15
CACNA1A-235ENST00000637004 TGM2P21980 687 aa15.99■□□□□ 0.15
CACNA1A-235ENST00000637004 GMPSP49915 693 aaPredicted RBP15.99■□□□□ 0.15
CACNA1A-235ENST00000637004 GK3PQ14409 553 aa15.99■□□□□ 0.15
CACNA1A-235ENST00000637004 SWSAP1Q6NVH7 229 aa15.99■□□□□ 0.15
CACNA1A-235ENST00000637004 LRRC8BQ6P9F7 803 aa15.99■□□□□ 0.15
CACNA1A-235ENST00000637004 EPGNQ6UW88 154 aa15.99■□□□□ 0.15
CACNA1A-235ENST00000637004 PLD5Q8N7P1 536 aa15.99■□□□□ 0.15
CACNA1A-235ENST00000637004 NLRP7Q8WX94 980 aa15.99■□□□□ 0.15
CACNA1A-235ENST00000637004 LENG8Q96PV6 779 aaPredicted RBP15.99■□□□□ 0.15
CACNA1A-235ENST00000637004 CCT7Q99832 543 aa15.99■□□□□ 0.15
CACNA1A-235ENST00000637004 KAT6AQ92794 2004 aa15.98■□□□□ 0.15
CACNA1A-235ENST00000637004 SPDYE16A6NNV3 312 aaPredicted RBP15.98■□□□□ 0.15
CACNA1A-235ENST00000637004 AIM2O14862 343 aa15.98■□□□□ 0.15
CACNA1A-235ENST00000637004 KLHL41O60662 606 aa15.98■□□□□ 0.15
CACNA1A-235ENST00000637004 ALDOAP04075 364 aaKnown RBP15.98■□□□□ 0.15
CACNA1A-235ENST00000637004 TPSB2P20231 275 aa15.98■□□□□ 0.15
CACNA1A-235ENST00000637004 BCAR1P56945 870 aa15.98■□□□□ 0.15
CACNA1A-235ENST00000637004 TRPC3Q13507 836 aa15.98■□□□□ 0.15
CACNA1A-235ENST00000637004 TPSAB1Q15661 275 aa15.98■□□□□ 0.15
CACNA1A-235ENST00000637004 AMIGO2Q86SJ2 522 aa15.98■□□□□ 0.15
CACNA1A-235ENST00000637004 KBTBD7Q8WVZ9 684 aa15.98■□□□□ 0.15
CACNA1A-235ENST00000637004 SLC7A3Q8WY07 619 aa15.98■□□□□ 0.15
CACNA1A-235ENST00000637004 RMDN3Q96TC7 470 aa15.98■□□□□ 0.15
CACNA1A-235ENST00000637004 PDCD2LQ9BRP1 358 aa15.98■□□□□ 0.15
CACNA1A-235ENST00000637004 SLC2A11Q9BYW1 496 aa15.98■□□□□ 0.15
CACNA1A-235ENST00000637004 COG4Q9H9E3 785 aa15.98■□□□□ 0.15
CACNA1A-235ENST00000637004 NMRK2Q9NPI5 230 aa15.98■□□□□ 0.15
CACNA1A-235ENST00000637004 FAIMQ9NVQ4 179 aa15.98■□□□□ 0.15
CACNA1A-235ENST00000637004 FBXO40Q9UH90 709 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms