RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 PXYLP1Q8TE99 480 aa7.4□□□□□ -1.22
BRCA1-230ENST00000634433 CPT1BQ92523 772 aa7.4□□□□□ -1.22
BRCA1-230ENST00000634433 LPPQ93052 612 aa7.4□□□□□ -1.22
BRCA1-230ENST00000634433 SMARCD1Q96GM5 515 aa7.4□□□□□ -1.22
BRCA1-230ENST00000634433 SLC9A7Q96T83 725 aa7.4□□□□□ -1.22
BRCA1-230ENST00000634433 SELENOSQ9BQE4 189 aa7.4□□□□□ -1.22
BRCA1-230ENST00000634433 ACBD6Q9BR61 282 aa7.4□□□□□ -1.22
BRCA1-230ENST00000634433 NRDE2Q9H7Z3 1164 aa7.4□□□□□ -1.22
BRCA1-230ENST00000634433 POPDC2Q9HBU9 364 aa7.4□□□□□ -1.22
BRCA1-230ENST00000634433 TRIM17Q9Y577 477 aa7.4□□□□□ -1.22
BRCA1-230ENST00000634433 H3BRJ5 948 aa7.4□□□□□ -1.23
BRCA1-230ENST00000634433 CAPN9O14815 690 aa7.4□□□□□ -1.23
BRCA1-230ENST00000634433 CHADO15335 359 aa7.4□□□□□ -1.23
BRCA1-230ENST00000634433 ATP2C2O75185 946 aa7.4□□□□□ -1.23
BRCA1-230ENST00000634433 FOSL1P15407 271 aa7.4□□□□□ -1.23
BRCA1-230ENST00000634433 ELNP15502 786 aa7.4□□□□□ -1.23
BRCA1-230ENST00000634433 ACAT1P24752 427 aaKnown RBP7.4□□□□□ -1.23
BRCA1-230ENST00000634433 TKTL1P51854 596 aa7.4□□□□□ -1.23
BRCA1-230ENST00000634433 ZNF135P52742 658 aaPredicted RBP7.4□□□□□ -1.23
BRCA1-230ENST00000634433 ACLYP53396 1101 aa7.4□□□□□ -1.23
BRCA1-230ENST00000634433 MAP3K7CLP57077 242 aa7.4□□□□□ -1.23
BRCA1-230ENST00000634433 RNASELQ05823 741 aaKnown RBP7.4□□□□□ -1.23
BRCA1-230ENST00000634433 PDIA2Q13087 525 aaKnown RBP7.4□□□□□ -1.23
BRCA1-230ENST00000634433 RASA2Q15283 850 aa7.4□□□□□ -1.23
BRCA1-230ENST00000634433 CCDC142Q17RM4 750 aa7.4□□□□□ -1.23
BRCA1-230ENST00000634433 TRIM71Q2Q1W2 868 aaKnown RBP7.4□□□□□ -1.23
BRCA1-230ENST00000634433 DCAF6Q58WW2 860 aa7.4□□□□□ -1.23
BRCA1-230ENST00000634433 PPP6R3Q5H9R7 873 aaPredicted RBP7.4□□□□□ -1.23
BRCA1-230ENST00000634433 CLEC20AQ6ZU45 233 aa7.4□□□□□ -1.23
BRCA1-230ENST00000634433 PAQR9Q6ZVX9 377 aa7.4□□□□□ -1.23
BRCA1-230ENST00000634433 PDZD4Q76G19 769 aaPredicted RBP7.4□□□□□ -1.23
BRCA1-230ENST00000634433 PRUNE1Q86TP1 453 aa7.4□□□□□ -1.23
BRCA1-230ENST00000634433 FAM35AQ86V20 835 aa7.4□□□□□ -1.23
BRCA1-230ENST00000634433 NLRP14Q86W24 1093 aa7.4□□□□□ -1.23
BRCA1-230ENST00000634433 ECHDC2Q86YB7 292 aa7.4□□□□□ -1.23
BRCA1-230ENST00000634433 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.4□□□□□ -1.23
BRCA1-230ENST00000634433 PQLC3Q8N755 202 aa7.4□□□□□ -1.23
BRCA1-230ENST00000634433 ATP11CQ8NB49 1132 aa7.4□□□□□ -1.23
BRCA1-230ENST00000634433 RNF169Q8NCN4 708 aa7.4□□□□□ -1.23
BRCA1-230ENST00000634433 PCDH19Q8TAB3 1148 aa7.4□□□□□ -1.23
BRCA1-230ENST00000634433 CLEC4CQ8WTT0 213 aa7.4□□□□□ -1.23
BRCA1-230ENST00000634433 PYROXD1Q8WU10 500 aa7.4□□□□□ -1.23
BRCA1-230ENST00000634433 IRGQQ8WZA9 623 aa7.4□□□□□ -1.23
BRCA1-230ENST00000634433 ARHGEF2Q92974 986 aaKnown RBP7.4□□□□□ -1.23
BRCA1-230ENST00000634433 NT5C3BQ969T7 300 aa7.4□□□□□ -1.23
BRCA1-230ENST00000634433 C9orf72Q96LT7 481 aa7.4□□□□□ -1.23
BRCA1-230ENST00000634433 SLC2A13Q96QE2 648 aa7.4□□□□□ -1.23
BRCA1-230ENST00000634433 KLC2Q9H0B6 622 aa7.4□□□□□ -1.23
BRCA1-230ENST00000634433 KRT82Q9NSB4 513 aa7.4□□□□□ -1.23
BRCA1-230ENST00000634433 INTS9Q9NV88 658 aaKnown RBP7.4□□□□□ -1.23
BRCA1-230ENST00000634433 GPATCH2LQ9NWQ4 482 aa7.4□□□□□ -1.23
BRCA1-230ENST00000634433 FETUBQ9UGM5 382 aa7.4□□□□□ -1.23
BRCA1-230ENST00000634433 SLC24A2Q9UI40 661 aa7.4□□□□□ -1.23
BRCA1-230ENST00000634433 FZD10Q9ULW2 581 aa7.4□□□□□ -1.23
BRCA1-230ENST00000634433 MAFFQ9ULX9 164 aa7.4□□□□□ -1.23
BRCA1-230ENST00000634433 EXOC1LA0A1B0GW35 172 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 CASTOR2A6NHX0 329 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 MEIS3P2A8K0S8 358 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 C9IYK1 514 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 CLDN5O00501 218 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 INPPL1O15357 1258 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 TRAPPC3O43617 180 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 SPAG6O75602 509 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 B3GAT3O94766 335 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 FAM107AO95990 144 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 F9P00740 461 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 TYMPP19971 482 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 PAX7P23759 505 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 GDF10P55107 478 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 IFI35P80217 286 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-230ENST00000634433 FOXK1P85037 733 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 GUCA2AQ02747 115 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 DEUP1Q05D60 604 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 ADCY1Q08828 1119 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 FXNQ16595 210 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 FAM180BQ6P0A1 224 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 NPNTQ6UXI9 565 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 TADA2BQ86TJ2 420 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 ZC3H18Q86VM9 953 aaKnown RBP7.39□□□□□ -1.23
BRCA1-230ENST00000634433 ANKMY2Q8IV38 441 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 PALM2Q8IXS6 379 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 ZBED8Q8IZ13 594 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 SCML4Q8N228 414 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 ZNF333Q96JL9 665 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 PWWP2AQ96N64 755 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 CCT8L2Q96SF2 557 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 VPS37BQ9H9H4 285 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 PPANQ9NQ55 473 aaKnown RBP7.39□□□□□ -1.23
BRCA1-230ENST00000634433 CRTAC1Q9NQ79 661 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 SENP1Q9P0U3 644 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 KANSL3Q9P2N6 904 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 RSPH14Q9UHP6 348 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 XPO7Q9UIA9 1087 aaKnown RBP7.39□□□□□ -1.23
BRCA1-230ENST00000634433 GGA2Q9UJY4 613 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 COLQQ9Y215 455 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-230ENST00000634433 HEY1Q9Y5J3 304 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 DCDC2CA8MYV0 355 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 E7ESA3 106 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 M0QZQ0 153 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 KCNN4O15554 427 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms