RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 KRT14P02533 472 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 ADH1AP07327 375 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 BMP1P13497 986 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 KRT5P13647 590 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 MCM7P33993 719 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 HARS2P49590 506 aaKnown RBP5.06□□□□□ -1.6
SDCBP-213ENST00000630925 ARHGDIBP52566 201 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 PMS2P54278 862 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 MYL6P60660 151 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 RPS16P62249 146 aaKnown RBP5.06□□□□□ -1.6
SDCBP-213ENST00000630925 UBE2HP62256 183 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 MRPS9P82933 396 aaKnown RBP5.06□□□□□ -1.6
SDCBP-213ENST00000630925 PTSQ03393 145 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 DMPKQ09013 629 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 FBXO43Q4G163 708 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 HS1BP3Q53T59 392 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 ZBTB37Q5TC79 503 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 RSPO2Q6UXX9 243 aaPredicted RBP5.06□□□□□ -1.6
SDCBP-213ENST00000630925 SLC36A4Q6YBV0 504 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 CCDC117Q8IWD4 279 aaPredicted RBP5.06□□□□□ -1.6
SDCBP-213ENST00000630925 MRPL50Q8N5N7 158 aaKnown RBP5.06□□□□□ -1.6
SDCBP-213ENST00000630925 FRMD1Q8N878 549 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 GLB1L3Q8NCI6 653 aaPredicted RBP5.06□□□□□ -1.6
SDCBP-213ENST00000630925 HIPK4Q8NE63 616 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 OR6Y1Q8NGX8 325 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 NPLOC4Q8TAT6 608 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 SETD6Q8TBK2 473 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 INPP5DQ92835 1189 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 KAT5Q92993 513 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 WNT8BQ93098 351 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 SLC35A4Q96G79 324 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 PSKH2Q96QS6 385 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 KCNK16Q96T55 309 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 NAA11Q9BSU3 229 aaPredicted RBP5.06□□□□□ -1.6
SDCBP-213ENST00000630925 FUZQ9BT04 418 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 PINK1Q9BXM7 581 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 ZNF518BQ9C0D4 1074 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 SLC5A7Q9GZV3 580 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 SLC25A18Q9H1K4 315 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 CLEC4MQ9H2X3 399 aaPredicted RBP5.06□□□□□ -1.6
SDCBP-213ENST00000630925 PSTPIP2Q9H939 334 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 WDR6Q9NNW5 1121 aaKnown RBP5.06□□□□□ -1.6
SDCBP-213ENST00000630925 ZDHHC3Q9NYG2 299 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 RGL1Q9NZL6 768 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 CNIH4Q9P003 139 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 KLHL9Q9P2J3 617 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 AFF4Q9UHB7 1163 aaKnown RBP5.06□□□□□ -1.6
SDCBP-213ENST00000630925 KDM3AQ9Y4C1 1321 aa5.06□□□□□ -1.6
SDCBP-213ENST00000630925 NINLQ9Y2I6 1382 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 SAMD9Q5K651 1589 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 ARHGAP23Q9P227 1491 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 SYCE3A1L190 88 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 OR6C76A6NM76 312 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 ENO4A6NNW6 628 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 ARNTLO00327 626 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 RGS13O14921 159 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 ZW10O43264 779 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 ZNF862O60290 1169 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 CTAG2O75638 210 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 IL1AP01583 271 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 GLI1P08151 1106 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 CLEC2LP0C7M8 214 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 CHRM3P20309 590 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 PTX3P26022 381 aaPredicted RBP5.05□□□□□ -1.6
SDCBP-213ENST00000630925 CSNK2BP67870 215 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 RPP38P78345 283 aaKnown RBP5.05□□□□□ -1.6
SDCBP-213ENST00000630925 LIPEQ05469 1076 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 PPIDQ08752 370 aaKnown RBP5.05□□□□□ -1.6
SDCBP-213ENST00000630925 IL10RAQ13651 578 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 THOC5Q13769 683 aaKnown RBP5.05□□□□□ -1.6
SDCBP-213ENST00000630925 DDX39BQ13838 428 aaKnown RBP5.05□□□□□ -1.6
SDCBP-213ENST00000630925 PTPAQ15257 358 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 FAM187BQ17R55 369 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 INSCQ1MX18 579 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 LETM2Q2VYF4 491 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 TWISTNBQ3B726 338 aaPredicted RBP5.05□□□□□ -1.6
SDCBP-213ENST00000630925 CCDC157Q569K6 752 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 FSTL4Q6MZW2 842 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 METAP1DQ6UB28 335 aaPredicted RBP5.05□□□□□ -1.6
SDCBP-213ENST00000630925 TADA2BQ86TJ2 420 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 OSTM1Q86WC4 334 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 GATAD2AQ86YP4 633 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 OR13C2Q8NGS9 318 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 OR9A1PQ8NGU1 263 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 NFKBIDQ8NI38 313 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 TSPEARQ8WU66 669 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 CORO2AQ92828 525 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 MASTLQ96GX5 879 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 C7orf34Q96L11 122 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 SNX22Q96L94 193 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 DMRTA2Q96SC8 542 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 ZSCAN10Q96SZ4 725 aaPredicted RBP5.05□□□□□ -1.6
SDCBP-213ENST00000630925 PRPF18Q99633 342 aaKnown RBP5.05□□□□□ -1.6
SDCBP-213ENST00000630925 RAD9AQ99638 391 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 TUBB6Q9BUF5 446 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 MLPHQ9BV36 600 aaPredicted RBP5.05□□□□□ -1.6
SDCBP-213ENST00000630925 KIFC3Q9BVG8 833 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 BOCQ9BWV1 1114 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 HEMGNQ9BXL5 484 aa5.05□□□□□ -1.6
SDCBP-213ENST00000630925 SCPEP1Q9HB40 452 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms