RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 ACCSLQ4AC99 568 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 DEFB123Q8N688 67 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 TTC13Q8NBP0 860 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 SELENOSQ9BQE4 189 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 NEU2Q9Y3R4 380 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 YJEFN3A6XGL0 299 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 E7ENQ6 273 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 H3BNC9 293 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 EEF2KO00418 725 aaKnown RBP12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 MSI1O43347 362 aaKnown RBP12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 KPNA1P52294 538 aaPredicted RBP12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 HTRA4P83105 476 aaPredicted RBP12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 TFDP2Q14188 446 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 TPGS1Q6ZTW0 290 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 ANKS1BQ7Z6G8 1248 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 UNC45BQ8IWX7 931 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 UBR7Q8N806 425 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 LMAN2LQ9H0V9 348 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 ATP8A1Q9Y2Q0 1164 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 ATXN2Q99700 1313 aaKnown RBP12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 C2orf71A6NGG8 1288 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 GABRDO14764 452 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 FSCN2O14926 492 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 IVDP26440 423 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 NR1H3Q13133 447 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 CDH18Q13634 790 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 TXNDC8Q6A555 127 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 CCDC137Q6PK04 289 aaKnown RBP12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 BBS5Q8N3I7 341 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 LRRC19Q9H756 370 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 RRN3Q9NYV6 651 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 SIGLEC16A6NMB1 481 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 H0Y626 953 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 PAPSS1O43252 624 aaPredicted RBP12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 BEST1O76090 585 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 SEC24CP53992 1094 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 MAMLD1Q13495 774 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 BOLA3Q53S33 107 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 RHBDF2Q6PJF5 856 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 MON1BQ7L1V2 547 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 JOSD2Q8TAC2 188 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 ART4Q93070 314 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 ZBP1Q9H171 429 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 SLC8A2Q9UPR5 921 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 SNX24Q9Y343 169 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 MCF2LO15068 1137 aa12.87□□□□□ -0.35
SYNGAP1-207ENST00000628646 MEFVO15553 781 aaPredicted RBP12.87□□□□□ -0.35
SYNGAP1-207ENST00000628646 TBX18O95935 607 aa12.87□□□□□ -0.35
SYNGAP1-207ENST00000628646 BYSLQ13895 437 aaKnown RBP12.87□□□□□ -0.35
SYNGAP1-207ENST00000628646 PRPF38BQ5VTL8 546 aaKnown RBP12.87□□□□□ -0.35
SYNGAP1-207ENST00000628646 C6orf89Q6UWU4 347 aa12.87□□□□□ -0.35
SYNGAP1-207ENST00000628646 NUDT18Q6ZVK8 323 aa12.87□□□□□ -0.35
SYNGAP1-207ENST00000628646 CPLX4Q7Z7G2 160 aa12.87□□□□□ -0.35
SYNGAP1-207ENST00000628646 SPATS2Q86XZ4 545 aaKnown RBP12.87□□□□□ -0.35
SYNGAP1-207ENST00000628646 TKTL2Q9H0I9 626 aa12.87□□□□□ -0.35
SYNGAP1-207ENST00000628646 HAUS2Q9NVX0 235 aa12.87□□□□□ -0.35
SYNGAP1-207ENST00000628646 ANAPC5Q9UJX4 755 aa12.87□□□□□ -0.35
SYNGAP1-207ENST00000628646 USP18Q9UMW8 372 aa12.87□□□□□ -0.35
SYNGAP1-207ENST00000628646 LZTS1Q9Y250 596 aa12.87□□□□□ -0.35
SYNGAP1-207ENST00000628646 DFFAO00273 331 aa12.87□□□□□ -0.35
SYNGAP1-207ENST00000628646 COILP38432 576 aaPredicted RBP12.87□□□□□ -0.35
SYNGAP1-207ENST00000628646 NNMTP40261 264 aa12.87□□□□□ -0.35
SYNGAP1-207ENST00000628646 DAOAP59103 153 aa12.87□□□□□ -0.35
SYNGAP1-207ENST00000628646 SPRED2Q7Z698 418 aa12.87□□□□□ -0.35
SYNGAP1-207ENST00000628646 UBE2Q1Q7Z7E8 422 aa12.87□□□□□ -0.35
SYNGAP1-207ENST00000628646 DENND1CQ8IV53 801 aa12.87□□□□□ -0.35
SYNGAP1-207ENST00000628646 ZNF689Q96CS4 500 aaPredicted RBP12.87□□□□□ -0.35
SYNGAP1-207ENST00000628646 MUC3BQ9H195 1237 aa12.87□□□□□ -0.35
SYNGAP1-207ENST00000628646 PABPC3Q9H361 631 aaKnown RBP12.87□□□□□ -0.35
SYNGAP1-207ENST00000628646 PROSCO94903 275 aa12.87□□□□□ -0.35
SYNGAP1-207ENST00000628646 CPP00450 1065 aa12.87□□□□□ -0.35
SYNGAP1-207ENST00000628646 FSHRP23945 695 aa12.87□□□□□ -0.35
SYNGAP1-207ENST00000628646 FNTAP49354 379 aa12.87□□□□□ -0.35
SYNGAP1-207ENST00000628646 KLF1Q13351 362 aaPredicted RBP12.87□□□□□ -0.35
SYNGAP1-207ENST00000628646 XYLT1Q86Y38 959 aa12.87□□□□□ -0.35
SYNGAP1-207ENST00000628646 RCOR2Q8IZ40 523 aa12.87□□□□□ -0.35
SYNGAP1-207ENST00000628646 C8orf48Q96LL4 319 aa12.87□□□□□ -0.35
SYNGAP1-207ENST00000628646 TMEM51Q9NW97 253 aa12.87□□□□□ -0.35
SYNGAP1-207ENST00000628646 AP4E1Q9UPM8 1137 aa12.87□□□□□ -0.35
SYNGAP1-207ENST00000628646 SMIM23A6NLE4 172 aa12.86□□□□□ -0.35
SYNGAP1-207ENST00000628646 FGF19O95750 216 aa12.86□□□□□ -0.35
SYNGAP1-207ENST00000628646 C6orf118Q5T5N4 469 aa12.86□□□□□ -0.35
SYNGAP1-207ENST00000628646 DARS2Q6PI48 645 aaKnown RBP12.86□□□□□ -0.35
SYNGAP1-207ENST00000628646 C10orf67Q8IYJ2 551 aa12.86□□□□□ -0.35
SYNGAP1-207ENST00000628646 CARNMT1Q8N4J0 409 aa12.86□□□□□ -0.35
SYNGAP1-207ENST00000628646 STK32AQ8WU08 396 aa12.86□□□□□ -0.35
SYNGAP1-207ENST00000628646 P3H4Q92791 437 aa12.86□□□□□ -0.35
SYNGAP1-207ENST00000628646 TBCBQ99426 244 aa12.86□□□□□ -0.35
SYNGAP1-207ENST00000628646 CNOT10Q9H9A5 744 aaKnown RBP12.86□□□□□ -0.35
SYNGAP1-207ENST00000628646 DZANK1Q9NVP4 752 aa12.86□□□□□ -0.35
SYNGAP1-207ENST00000628646 NKIRAS1Q9NYS0 192 aa12.86□□□□□ -0.35
SYNGAP1-207ENST00000628646 CFAP97Q9P2B7 532 aa12.86□□□□□ -0.35
SYNGAP1-207ENST00000628646 GOLGA6L7A0A1B0GV03 622 aa12.86□□□□□ -0.35
SYNGAP1-207ENST00000628646 TRDMT1O14717 391 aaKnown RBP12.86□□□□□ -0.35
SYNGAP1-207ENST00000628646 MATKP42679 507 aa12.86□□□□□ -0.35
SYNGAP1-207ENST00000628646 MAGEA11P43364 429 aa12.86□□□□□ -0.35
SYNGAP1-207ENST00000628646 NTHL1P78549 312 aa12.86□□□□□ -0.35
SYNGAP1-207ENST00000628646 NUGGCQ68CJ6 796 aa12.86□□□□□ -0.35
SYNGAP1-207ENST00000628646 IL31Q6EBC2 164 aa12.86□□□□□ -0.35
SYNGAP1-207ENST00000628646 ANKS4BQ8N8V4 417 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms