RNA–Protein interactions for RNA: ENST00000628364.2

NRXN1-228, Transcript of neurexin 1, humanhuman

TSL 5 BASIC

Gene NRXN1, Length 2,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-228ENST00000628364 MIPEPQ99797 713 aa27.78■■■□□ 2.04
NRXN1-228ENST00000628364 TRIM56Q9BRZ2 755 aaKnown RBP27.78■■■□□ 2.04
NRXN1-228ENST00000628364 CADM1Q9BY67 442 aaKnown RBP27.78■■■□□ 2.04
NRXN1-228ENST00000628364 WWP1Q9H0M0 922 aa27.78■■■□□ 2.04
NRXN1-228ENST00000628364 RNF39Q9H2S5 420 aa27.78■■■□□ 2.04
NRXN1-228ENST00000628364 CXorf56Q9H5V9 222 aa27.78■■■□□ 2.04
NRXN1-228ENST00000628364 LRRC4Q9HBW1 653 aa27.78■■■□□ 2.04
NRXN1-228ENST00000628364 GNEQ9Y223 722 aaKnown RBP27.78■■■□□ 2.04
NRXN1-228ENST00000628364 RNF103O00237 685 aa27.77■■■□□ 2.04
NRXN1-228ENST00000628364 FCHO1O14526 889 aa27.77■■■□□ 2.04
NRXN1-228ENST00000628364 GYG2O15488 501 aa27.77■■■□□ 2.04
NRXN1-228ENST00000628364 ESRRAP11474 423 aaPredicted RBP27.77■■■□□ 2.04
NRXN1-228ENST00000628364 PGAM1P18669 254 aa27.77■■■□□ 2.04
NRXN1-228ENST00000628364 SOX4Q06945 474 aaPredicted RBP27.77■■■□□ 2.04
NRXN1-228ENST00000628364 AP1B1Q10567 949 aa27.77■■■□□ 2.04
NRXN1-228ENST00000628364 PAFAH1B3Q15102 231 aaKnown RBP27.77■■■□□ 2.04
NRXN1-228ENST00000628364 TMEM40Q8WWA1 233 aa27.77■■■□□ 2.04
NRXN1-228ENST00000628364 SPON1Q9HCB6 807 aa27.77■■■□□ 2.04
NRXN1-228ENST00000628364 GSC2O15499 205 aa27.77■■■□□ 2.04
NRXN1-228ENST00000628364 GNAZP19086 355 aa27.77■■■□□ 2.04
NRXN1-228ENST00000628364 NIPAL4Q0D2K0 466 aa27.77■■■□□ 2.04
NRXN1-228ENST00000628364 TEX44Q53QW1 395 aa27.77■■■□□ 2.04
NRXN1-228ENST00000628364 PDCD7Q8N8D1 485 aaKnown RBP27.77■■■□□ 2.04
NRXN1-228ENST00000628364 DENND2DQ9H6A0 471 aaPredicted RBP27.77■■■□□ 2.04
NRXN1-228ENST00000628364 PTPN1P18031 435 aaKnown RBP27.76■■■□□ 2.03
NRXN1-228ENST00000628364 LRPAP1P30533 357 aa27.76■■■□□ 2.03
NRXN1-228ENST00000628364 AIF1P55008 147 aa27.76■■■□□ 2.03
NRXN1-228ENST00000628364 OSTM1Q86WC4 334 aa27.76■■■□□ 2.03
NRXN1-228ENST00000628364 GPATCH11Q8N954 259 aa27.76■■■□□ 2.03
NRXN1-228ENST00000628364 GOLGA2P5Q9HBQ8 144 aa27.76■■■□□ 2.03
NRXN1-228ENST00000628364 IPPQ9Y573 584 aa27.76■■■□□ 2.03
NRXN1-228ENST00000628364 SNNO75324 88 aaPredicted RBP27.76■■■□□ 2.03
NRXN1-228ENST00000628364 CRYBB1P53674 252 aaPredicted RBP27.76■■■□□ 2.03
NRXN1-228ENST00000628364 C4orf50Q6ZRC1 276 aa27.76■■■□□ 2.03
NRXN1-228ENST00000628364 SIX6OS1Q8N1H7 587 aa27.76■■■□□ 2.03
NRXN1-228ENST00000628364 SLC2A13Q96QE2 648 aa27.76■■■□□ 2.03
NRXN1-228ENST00000628364 SLC9A7Q96T83 725 aa27.76■■■□□ 2.03
NRXN1-228ENST00000628364 MMADHCQ9H3L0 296 aaPredicted RBP27.76■■■□□ 2.03
NRXN1-228ENST00000628364 DCLRE1BQ9H816 532 aa27.76■■■□□ 2.03
NRXN1-228ENST00000628364 NKX1-2Q9UD57 310 aaPredicted RBP27.76■■■□□ 2.03
NRXN1-228ENST00000628364 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP27.75■■■□□ 2.03
NRXN1-228ENST00000628364 TPBGLP0DKB5 382 aa27.75■■■□□ 2.03
NRXN1-228ENST00000628364 OTUD1Q5VV17 481 aaPredicted RBP27.75■■■□□ 2.03
NRXN1-228ENST00000628364 PDZD4Q76G19 769 aaPredicted RBP27.75■■■□□ 2.03
NRXN1-228ENST00000628364 ATP2A3Q93084 1043 aa27.75■■■□□ 2.03
NRXN1-228ENST00000628364 WNT8BQ93098 351 aa27.75■■■□□ 2.03
NRXN1-228ENST00000628364 RAD54BQ9Y620 910 aa27.75■■■□□ 2.03
NRXN1-228ENST00000628364 M0QYT0 321 aa27.75■■■□□ 2.03
NRXN1-228ENST00000628364 GM2AP17900 193 aa27.75■■■□□ 2.03
NRXN1-228ENST00000628364 PSEN2P49810 448 aa27.75■■■□□ 2.03
NRXN1-228ENST00000628364 DEUP1Q05D60 604 aa27.75■■■□□ 2.03
NRXN1-228ENST00000628364 STX3Q13277 289 aa27.75■■■□□ 2.03
NRXN1-228ENST00000628364 ARID3BQ8IVW6 561 aaPredicted RBP27.75■■■□□ 2.03
NRXN1-228ENST00000628364 MAB21L3Q8N8X9 362 aa27.75■■■□□ 2.03
NRXN1-228ENST00000628364 SIKE1Q9BRV8 207 aa27.75■■■□□ 2.03
NRXN1-228ENST00000628364 ZNF408Q9H9D4 720 aa27.75■■■□□ 2.03
NRXN1-228ENST00000628364 BATF3Q9NR55 127 aa27.75■■■□□ 2.03
NRXN1-228ENST00000628364 SDAD1Q9NVU7 687 aaKnown RBP eCLIP27.75■■■□□ 2.03
NRXN1-228ENST00000628364 THAP1Q9NVV9 213 aa27.75■■■□□ 2.03
NRXN1-228ENST00000628364 IGSF9Q9P2J2 1179 aa27.75■■■□□ 2.03
NRXN1-228ENST00000628364 CYB561D2O14569 222 aa27.74■■■□□ 2.03
NRXN1-228ENST00000628364 CLNS1AP54105 237 aaKnown RBP27.74■■■□□ 2.03
NRXN1-228ENST00000628364 PACS1Q6VY07 963 aa27.74■■■□□ 2.03
NRXN1-228ENST00000628364 NME8Q8N427 588 aa27.74■■■□□ 2.03
NRXN1-228ENST00000628364 CCNYQ8ND76 341 aa27.74■■■□□ 2.03
NRXN1-228ENST00000628364 NDRG1Q92597 394 aaKnown RBP27.74■■■□□ 2.03
NRXN1-228ENST00000628364 HAS3O00219 553 aa27.73■■■□□ 2.03
NRXN1-228ENST00000628364 GLRA3O75311 464 aa27.73■■■□□ 2.03
NRXN1-228ENST00000628364 ARHGAP24Q8N264 748 aa27.73■■■□□ 2.03
NRXN1-228ENST00000628364 SMC1BQ8NDV3 1235 aa27.73■■■□□ 2.03
NRXN1-228ENST00000628364 MCUR1Q96AQ8 359 aa27.73■■■□□ 2.03
NRXN1-228ENST00000628364 DCDC2Q9UHG0 476 aa27.73■■■□□ 2.03
NRXN1-228ENST00000628364 NR2E3Q9Y5X4 410 aa27.73■■■□□ 2.03
NRXN1-228ENST00000628364 EEF2KO00418 725 aaKnown RBP27.73■■■□□ 2.03
NRXN1-228ENST00000628364 FBXO21O94952 628 aa27.73■■■□□ 2.03
NRXN1-228ENST00000628364 MGAT1P26572 445 aa27.73■■■□□ 2.03
NRXN1-228ENST00000628364 SESN2P58004 480 aaPredicted RBP27.73■■■□□ 2.03
NRXN1-228ENST00000628364 IFRD2Q12894 506 aaPredicted RBP27.73■■■□□ 2.03
NRXN1-228ENST00000628364 DPYSQ14117 519 aa27.73■■■□□ 2.03
NRXN1-228ENST00000628364 HIC1Q14526 733 aa27.73■■■□□ 2.03
NRXN1-228ENST00000628364 TLK2Q86UE8 772 aa27.73■■■□□ 2.03
NRXN1-228ENST00000628364 SMG8Q8ND04 991 aaKnown RBP27.73■■■□□ 2.03
NRXN1-228ENST00000628364 ARNTL2Q8WYA1 636 aa27.73■■■□□ 2.03
NRXN1-228ENST00000628364 NMUR2Q9GZQ4 415 aa27.73■■■□□ 2.03
NRXN1-228ENST00000628364 GABRDO14764 452 aa27.72■■■□□ 2.03
NRXN1-228ENST00000628364 CREB3O43889 395 aa27.72■■■□□ 2.03
NRXN1-228ENST00000628364 WASHC5Q12768 1159 aa27.72■■■□□ 2.03
NRXN1-228ENST00000628364 CRYMQ14894 314 aa27.72■■■□□ 2.03
NRXN1-228ENST00000628364 TBCCQ15814 346 aa27.72■■■□□ 2.03
NRXN1-228ENST00000628364 RFX8Q6ZV50 586 aa27.72■■■□□ 2.03
NRXN1-228ENST00000628364 PAQR9Q6ZVX9 377 aa27.72■■■□□ 2.03
NRXN1-228ENST00000628364 PAXIP1Q6ZW49 1069 aaPredicted RBP27.72■■■□□ 2.03
NRXN1-228ENST00000628364 MED10Q9BTT4 135 aa27.72■■■□□ 2.03
NRXN1-228ENST00000628364 PRDM12Q9H4Q4 367 aa27.72■■■□□ 2.03
NRXN1-228ENST00000628364 TREHO43280 583 aa27.72■■■□□ 2.03
NRXN1-228ENST00000628364 CLEC20AQ6ZU45 233 aa27.72■■■□□ 2.03
NRXN1-228ENST00000628364 PPP1R13LQ8WUF5 828 aa27.72■■■□□ 2.03
NRXN1-228ENST00000628364 PRR11Q96HE9 360 aaPredicted RBP27.72■■■□□ 2.03
NRXN1-228ENST00000628364 ZNF570Q96NI8 536 aa27.72■■■□□ 2.03
NRXN1-228ENST00000628364 XPNPEP3Q9NQH7 507 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms