RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 AKR1B10O60218 316 aa21.05■□□□□ 0.96
PTCD3-220ENST00000627371 DCNP07585 359 aaKnown RBP21.05■□□□□ 0.96
PTCD3-220ENST00000627371 CHRNB1P11230 501 aa21.05■□□□□ 0.96
PTCD3-220ENST00000627371 DRD1P21728 446 aa21.05■□□□□ 0.96
PTCD3-220ENST00000627371 SLC6A11P48066 632 aa21.05■□□□□ 0.96
PTCD3-220ENST00000627371 ZNF143P52747 638 aaPredicted RBP21.05■□□□□ 0.96
PTCD3-220ENST00000627371 ATXN1P54253 815 aaKnown RBP21.05■□□□□ 0.96
PTCD3-220ENST00000627371 ATP11AP98196 1134 aa21.05■□□□□ 0.96
PTCD3-220ENST00000627371 CCINQ13939 588 aa21.05■□□□□ 0.96
PTCD3-220ENST00000627371 LRRC32Q14392 662 aa21.05■□□□□ 0.96
PTCD3-220ENST00000627371 C15orf59Q2T9L4 293 aaPredicted RBP21.05■□□□□ 0.96
PTCD3-220ENST00000627371 MPPE1Q53F39 396 aa21.05■□□□□ 0.96
PTCD3-220ENST00000627371 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.05■□□□□ 0.96
PTCD3-220ENST00000627371 NAT16Q8N8M0 369 aa21.05■□□□□ 0.96
PTCD3-220ENST00000627371 CENPIQ92674 756 aaPredicted RBP21.05■□□□□ 0.96
PTCD3-220ENST00000627371 BHMTQ93088 406 aa21.05■□□□□ 0.96
PTCD3-220ENST00000627371 CCDC42Q96M95 316 aa21.05■□□□□ 0.96
PTCD3-220ENST00000627371 WDCPQ9H6R7 721 aa21.05■□□□□ 0.96
PTCD3-220ENST00000627371 PLK2Q9NYY3 685 aa21.05■□□□□ 0.96
PTCD3-220ENST00000627371 DLGAP2Q9P1A6 1054 aa21.05■□□□□ 0.96
PTCD3-220ENST00000627371 DOCK4Q8N1I0 1966 aa21.05■□□□□ 0.96
PTCD3-220ENST00000627371 TULP3O75386 442 aa21.04■□□□□ 0.96
PTCD3-220ENST00000627371 AVPR2P30518 371 aa21.04■□□□□ 0.96
PTCD3-220ENST00000627371 MAGEA9P43362 315 aa21.04■□□□□ 0.96
PTCD3-220ENST00000627371 RPS9P46781 194 aaKnown RBP21.04■□□□□ 0.96
PTCD3-220ENST00000627371 CDO1Q16878 200 aa21.04■□□□□ 0.96
PTCD3-220ENST00000627371 DGKKQ5KSL6 1271 aa21.04■□□□□ 0.96
PTCD3-220ENST00000627371 PIK3R6Q5UE93 754 aa21.04■□□□□ 0.96
PTCD3-220ENST00000627371 RFWD3Q6PCD5 774 aa21.04■□□□□ 0.96
PTCD3-220ENST00000627371 DDI1Q8WTU0 396 aa21.04■□□□□ 0.96
PTCD3-220ENST00000627371 PANX2Q96RD6 677 aa21.04■□□□□ 0.96
PTCD3-220ENST00000627371 PNKPQ96T60 521 aa21.04■□□□□ 0.96
PTCD3-220ENST00000627371 TKTL2Q9H0I9 626 aa21.04■□□□□ 0.96
PTCD3-220ENST00000627371 THAP2Q9H0W7 228 aa21.04■□□□□ 0.96
PTCD3-220ENST00000627371 LMAN1LQ9HAT1 526 aa21.04■□□□□ 0.96
PTCD3-220ENST00000627371 MRPL47Q9HD33 250 aaKnown RBP21.04■□□□□ 0.96
PTCD3-220ENST00000627371 DNAJC17Q9NVM6 304 aaKnown RBP21.04■□□□□ 0.96
PTCD3-220ENST00000627371 IMPACTQ9P2X3 320 aa21.04■□□□□ 0.96
PTCD3-220ENST00000627371 DEC1Q9P2X7 70 aa21.04■□□□□ 0.96
PTCD3-220ENST00000627371 MYO18AQ92614 2054 aaKnown RBP21.04■□□□□ 0.96
PTCD3-220ENST00000627371 CCP110O43303 1012 aa21.03■□□□□ 0.96
PTCD3-220ENST00000627371 TSPAN3O60637 253 aa21.03■□□□□ 0.96
PTCD3-220ENST00000627371 EGFP01133 1207 aa21.03■□□□□ 0.96
PTCD3-220ENST00000627371 TACR2P21452 398 aa21.03■□□□□ 0.96
PTCD3-220ENST00000627371 HOXD9P28356 352 aaPredicted RBP21.03■□□□□ 0.96
PTCD3-220ENST00000627371 SGSHP51688 502 aa21.03■□□□□ 0.96
PTCD3-220ENST00000627371 PREPLQ4J6C6 727 aaPredicted RBP21.03■□□□□ 0.96
PTCD3-220ENST00000627371 MS4A13Q5J8X5 152 aa21.03■□□□□ 0.96
PTCD3-220ENST00000627371 MPP7Q5T2T1 576 aa21.03■□□□□ 0.96
PTCD3-220ENST00000627371 SH3PXD2AQ5TCZ1 1133 aa21.03■□□□□ 0.96
PTCD3-220ENST00000627371 RAP1GAP2Q684P5 730 aa21.03■□□□□ 0.96
PTCD3-220ENST00000627371 CHSY1Q86X52 802 aa21.03■□□□□ 0.96
PTCD3-220ENST00000627371 PHTF2Q8N3S3 785 aa21.03■□□□□ 0.96
PTCD3-220ENST00000627371 FAM172AQ8WUF8 416 aa21.03■□□□□ 0.96
PTCD3-220ENST00000627371 TMA16Q96EY4 203 aaKnown RBP21.03■□□□□ 0.96
PTCD3-220ENST00000627371 PRICKLE1Q96MT3 831 aaPredicted RBP21.03■□□□□ 0.96
PTCD3-220ENST00000627371 PRMT1Q99873 361 aaKnown RBP21.03■□□□□ 0.96
PTCD3-220ENST00000627371 CNPY3Q9BT09 278 aa21.03■□□□□ 0.96
PTCD3-220ENST00000627371 ANLNQ9NQW6 1124 aa21.03■□□□□ 0.96
PTCD3-220ENST00000627371 MYO1AQ9UBC5 1043 aa21.03■□□□□ 0.96
PTCD3-220ENST00000627371 FBXO10Q9UK96 956 aa21.03■□□□□ 0.96
PTCD3-220ENST00000627371 TMEM191CA6NGB0 347 aa21.02■□□□□ 0.96
PTCD3-220ENST00000627371 PAGE1O75459 146 aa21.02■□□□□ 0.96
PTCD3-220ENST00000627371 APODP05090 189 aa21.02■□□□□ 0.96
PTCD3-220ENST00000627371 FECHP22830 423 aa21.02■□□□□ 0.96
PTCD3-220ENST00000627371 GALCP54803 685 aa21.02■□□□□ 0.96
PTCD3-220ENST00000627371 HDAC4P56524 1084 aa21.02■□□□□ 0.96
PTCD3-220ENST00000627371 OGDHQ02218 1023 aa21.02■□□□□ 0.96
PTCD3-220ENST00000627371 KDSRQ06136 332 aa21.02■□□□□ 0.96
PTCD3-220ENST00000627371 MESP2Q0VG99 397 aa21.02■□□□□ 0.96
PTCD3-220ENST00000627371 FBXO43Q4G163 708 aa21.02■□□□□ 0.96
PTCD3-220ENST00000627371 RAB6CQ53S08 254 aa21.02■□□□□ 0.96
PTCD3-220ENST00000627371 RNF43Q68DV7 783 aa21.02■□□□□ 0.96
PTCD3-220ENST00000627371 GRAMD4Q6IC98 578 aa21.02■□□□□ 0.96
PTCD3-220ENST00000627371 FAM131BQ86XD5 332 aa21.02■□□□□ 0.96
PTCD3-220ENST00000627371 SYNPOQ8N3V7 929 aa21.02■□□□□ 0.96
PTCD3-220ENST00000627371 HJURPQ8NCD3 748 aaPredicted RBP21.02■□□□□ 0.96
PTCD3-220ENST00000627371 FNIP1Q8TF40 1166 aa21.02■□□□□ 0.96
PTCD3-220ENST00000627371 EZH1Q92800 747 aaPredicted RBP21.02■□□□□ 0.96
PTCD3-220ENST00000627371 RAB6CQ9H0N0 254 aa21.02■□□□□ 0.96
PTCD3-220ENST00000627371 CHRDQ9H2X0 955 aa21.02■□□□□ 0.96
PTCD3-220ENST00000627371 ARHGEF4Q9NR80 690 aa21.02■□□□□ 0.96
PTCD3-220ENST00000627371 RBM12Q9NTZ6 932 aaKnown RBP21.02■□□□□ 0.96
PTCD3-220ENST00000627371 SPTLC3Q9NUV7 552 aa21.02■□□□□ 0.96
PTCD3-220ENST00000627371 A0A0A0MRY4 1105 aa21.01■□□□□ 0.95
PTCD3-220ENST00000627371 TYW5A2RUC4 315 aaKnown RBP21.01■□□□□ 0.95
PTCD3-220ENST00000627371 F5H5T6 163 aa21.01■□□□□ 0.95
PTCD3-220ENST00000627371 I6L893 689 aaPredicted RBP21.01■□□□□ 0.95
PTCD3-220ENST00000627371 KAT7O95251 611 aa21.01■□□□□ 0.95
PTCD3-220ENST00000627371 CYP1A2P05177 515 aa21.01■□□□□ 0.95
PTCD3-220ENST00000627371 DESP17661 470 aa21.01■□□□□ 0.95
PTCD3-220ENST00000627371 GRIA2P42262 883 aa21.01■□□□□ 0.95
PTCD3-220ENST00000627371 DGKGP49619 791 aa21.01■□□□□ 0.95
PTCD3-220ENST00000627371 LGI2Q8N0V4 545 aa21.01■□□□□ 0.95
PTCD3-220ENST00000627371 TERB1Q8NA31 727 aa21.01■□□□□ 0.95
PTCD3-220ENST00000627371 SPC24Q8NBT2 197 aa21.01■□□□□ 0.95
PTCD3-220ENST00000627371 MYEOVQ96EZ4 313 aa21.01■□□□□ 0.95
PTCD3-220ENST00000627371 IER2Q9BTL4 223 aa21.01■□□□□ 0.95
PTCD3-220ENST00000627371 SLC2A11Q9BYW1 496 aa21.01■□□□□ 0.95
PTCD3-220ENST00000627371 HS3ST4Q9Y661 456 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms