RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 GVINP1Q7Z2Y8 2422 aa15.28■□□□□ 0.04
PNKP-221ENST00000627317 PRR23AA6NEV1 266 aa15.28■□□□□ 0.04
PNKP-221ENST00000627317 LCA5LO95447 670 aa15.28■□□□□ 0.04
PNKP-221ENST00000627317 MOCS2O96007 188 aaPredicted RBP15.28■□□□□ 0.04
PNKP-221ENST00000627317 F9P00740 461 aa15.28■□□□□ 0.04
PNKP-221ENST00000627317 IGLV3-27P01718 113 aa15.28■□□□□ 0.04
PNKP-221ENST00000627317 SLC2A3P11169 496 aa15.28■□□□□ 0.04
PNKP-221ENST00000627317 TFE3P19532 575 aaPredicted RBP15.28■□□□□ 0.04
PNKP-221ENST00000627317 CCR1P32246 355 aa15.28■□□□□ 0.04
PNKP-221ENST00000627317 RDXP35241 583 aaKnown RBP15.28■□□□□ 0.04
PNKP-221ENST00000627317 MAGEA1P43355 309 aa15.28■□□□□ 0.04
PNKP-221ENST00000627317 GAB4Q2WGN9 574 aa15.28■□□□□ 0.04
PNKP-221ENST00000627317 ZC3H12AQ5D1E8 599 aaKnown RBP15.28■□□□□ 0.04
PNKP-221ENST00000627317 TMEM196Q5HYL7 178 aa15.28■□□□□ 0.04
PNKP-221ENST00000627317 OTUD1Q5VV17 481 aaPredicted RBP15.28■□□□□ 0.04
PNKP-221ENST00000627317 NAIF1Q69YI7 327 aaPredicted RBP15.28■□□□□ 0.04
PNKP-221ENST00000627317 Q6ZS52 159 aa15.28■□□□□ 0.04
PNKP-221ENST00000627317 HTR3DQ70Z44 454 aa15.28■□□□□ 0.04
PNKP-221ENST00000627317 ASCL5Q7RTU5 278 aa15.28■□□□□ 0.04
PNKP-221ENST00000627317 DENND1CQ8IV53 801 aa15.28■□□□□ 0.04
PNKP-221ENST00000627317 BBS7Q8IWZ6 715 aa15.28■□□□□ 0.04
PNKP-221ENST00000627317 ATP2A3Q93084 1043 aa15.28■□□□□ 0.04
PNKP-221ENST00000627317 NT5C3BQ969T7 300 aa15.28■□□□□ 0.04
PNKP-221ENST00000627317 FCRL2Q96LA5 508 aaPredicted RBP15.28■□□□□ 0.04
PNKP-221ENST00000627317 CNPY3Q9BT09 278 aa15.28■□□□□ 0.04
PNKP-221ENST00000627317 ECT2Q9H8V3 914 aa15.28■□□□□ 0.04
PNKP-221ENST00000627317 LMAN1LQ9HAT1 526 aa15.28■□□□□ 0.04
PNKP-221ENST00000627317 RBM12Q9NTZ6 932 aaKnown RBP15.28■□□□□ 0.04
PNKP-221ENST00000627317 CTTNBP2NLQ9P2B4 639 aa15.28■□□□□ 0.04
PNKP-221ENST00000627317 INTUQ9ULD6 942 aa15.28■□□□□ 0.04
PNKP-221ENST00000627317 CACNA1IQ9P0X4 2223 aa15.27■□□□□ 0.04
PNKP-221ENST00000627317 TRDMT1O14717 391 aaKnown RBP15.27■□□□□ 0.04
PNKP-221ENST00000627317 LAMTOR5O43504 91 aa15.27■□□□□ 0.04
PNKP-221ENST00000627317 NFATC1O95644 943 aa15.27■□□□□ 0.04
PNKP-221ENST00000627317 PSMA2P25787 234 aa15.27■□□□□ 0.04
PNKP-221ENST00000627317 SLC11A2P49281 568 aa15.27■□□□□ 0.04
PNKP-221ENST00000627317 ZNF143P52747 638 aaPredicted RBP15.27■□□□□ 0.04
PNKP-221ENST00000627317 PON2Q15165 354 aa15.27■□□□□ 0.04
PNKP-221ENST00000627317 C15orf59Q2T9L4 293 aaPredicted RBP15.27■□□□□ 0.04
PNKP-221ENST00000627317 CCDC14Q49A88 953 aa15.27■□□□□ 0.04
PNKP-221ENST00000627317 FSTL4Q6MZW2 842 aa15.27■□□□□ 0.04
PNKP-221ENST00000627317 Q6ZNB5 142 aa15.27■□□□□ 0.04
PNKP-221ENST00000627317 CPA6Q8N4T0 437 aa15.27■□□□□ 0.04
PNKP-221ENST00000627317 FAM172AQ8WUF8 416 aa15.27■□□□□ 0.04
PNKP-221ENST00000627317 OTUB2Q96DC9 234 aa15.27■□□□□ 0.04
PNKP-221ENST00000627317 PGAP3Q96FM1 320 aaPredicted RBP15.27■□□□□ 0.04
PNKP-221ENST00000627317 SLC39A13Q96H72 371 aa15.27■□□□□ 0.04
PNKP-221ENST00000627317 LINC00597Q9H2U6 94 aa15.27■□□□□ 0.04
PNKP-221ENST00000627317 PIGVQ9NUD9 493 aa15.27■□□□□ 0.04
PNKP-221ENST00000627317 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.27■□□□□ 0.04
PNKP-221ENST00000627317 UVRAGQ9P2Y5 699 aa15.27■□□□□ 0.04
PNKP-221ENST00000627317 SLC12A6Q9UHW9 1150 aa15.27■□□□□ 0.04
PNKP-221ENST00000627317 ANAPC7Q9UJX3 599 aa15.27■□□□□ 0.04
PNKP-221ENST00000627317 PCDHA13Q9Y5I0 950 aa15.27■□□□□ 0.04
PNKP-221ENST00000627317 GPR179Q6PRD1 2367 aa15.26■□□□□ 0.03
PNKP-221ENST00000627317 TMEM191CA6NGB0 347 aa15.26■□□□□ 0.03
PNKP-221ENST00000627317 ARHGAP6O43182 974 aa15.26■□□□□ 0.03
PNKP-221ENST00000627317 CCP110O43303 1012 aa15.26■□□□□ 0.03
PNKP-221ENST00000627317 GREM1O60565 184 aa15.26■□□□□ 0.03
PNKP-221ENST00000627317 PAPSS2O95340 614 aaPredicted RBP15.26■□□□□ 0.03
PNKP-221ENST00000627317 LATS1O95835 1130 aa15.26■□□□□ 0.03
PNKP-221ENST00000627317 KLKB1P03952 638 aa15.26■□□□□ 0.03
PNKP-221ENST00000627317 GJA4P35212 333 aa15.26■□□□□ 0.03
PNKP-221ENST00000627317 KRT83P78385 493 aa15.26■□□□□ 0.03
PNKP-221ENST00000627317 LRRC32Q14392 662 aa15.26■□□□□ 0.03
PNKP-221ENST00000627317 PPP2R5DQ14738 602 aa15.26■□□□□ 0.03
PNKP-221ENST00000627317 DGKKQ5KSL6 1271 aa15.26■□□□□ 0.03
PNKP-221ENST00000627317 BRMS1LQ5PSV4 323 aa15.26■□□□□ 0.03
PNKP-221ENST00000627317 STRADAQ7RTN6 431 aa15.26■□□□□ 0.03
PNKP-221ENST00000627317 KIAA1328Q86T90 577 aa15.26■□□□□ 0.03
PNKP-221ENST00000627317 LRRC8AQ8IWT6 810 aa15.26■□□□□ 0.03
PNKP-221ENST00000627317 ATP6V0D2Q8N8Y2 350 aa15.26■□□□□ 0.03
PNKP-221ENST00000627317 ZBTB44Q8NCP5 570 aa15.26■□□□□ 0.03
PNKP-221ENST00000627317 ACRBPQ8NEB7 543 aa15.26■□□□□ 0.03
PNKP-221ENST00000627317 ZNF564Q8TBZ8 553 aaPredicted RBP15.26■□□□□ 0.03
PNKP-221ENST00000627317 FNIP1Q8TF40 1166 aa15.26■□□□□ 0.03
PNKP-221ENST00000627317 RFFLQ8WZ73 363 aa15.26■□□□□ 0.03
PNKP-221ENST00000627317 EZH1Q92800 747 aaPredicted RBP15.26■□□□□ 0.03
PNKP-221ENST00000627317 PDLIM2Q96JY6 352 aa15.26■□□□□ 0.03
PNKP-221ENST00000627317 ADAM33Q9BZ11 813 aa15.26■□□□□ 0.03
PNKP-221ENST00000627317 TRIM7Q9C029 511 aa15.26■□□□□ 0.03
PNKP-221ENST00000627317 FBRSL1Q9HCM7 1045 aaKnown RBP15.26■□□□□ 0.03
PNKP-221ENST00000627317 C2orf42Q9NWW7 574 aa15.26■□□□□ 0.03
PNKP-221ENST00000627317 CALCOCO1Q9P1Z2 691 aa15.26■□□□□ 0.03
PNKP-221ENST00000627317 AGO1Q9UL18 857 aaKnown RBP15.26■□□□□ 0.03
PNKP-221ENST00000627317 R4GN57 208 aa15.26■□□□□ 0.03
PNKP-221ENST00000627317 GFRA3O60609 400 aa15.25■□□□□ 0.03
PNKP-221ENST00000627317 ADH1CP00326 375 aa15.25■□□□□ 0.03
PNKP-221ENST00000627317 CXCR3P49682 368 aa15.25■□□□□ 0.03
PNKP-221ENST00000627317 ATXN1P54253 815 aaKnown RBP15.25■□□□□ 0.03
PNKP-221ENST00000627317 OGDHQ02218 1023 aa15.25■□□□□ 0.03
PNKP-221ENST00000627317 NR1H3Q13133 447 aa15.25■□□□□ 0.03
PNKP-221ENST00000627317 MTA1Q13330 715 aa15.25■□□□□ 0.03
PNKP-221ENST00000627317 EIF4EBP2Q13542 120 aaPredicted RBP15.25■□□□□ 0.03
PNKP-221ENST00000627317 FAM131BQ86XD5 332 aa15.25■□□□□ 0.03
PNKP-221ENST00000627317 RHOT2Q8IXI1 618 aa15.25■□□□□ 0.03
PNKP-221ENST00000627317 TXLNBQ8N3L3 684 aa15.25■□□□□ 0.03
PNKP-221ENST00000627317 SYNPOQ8N3V7 929 aa15.25■□□□□ 0.03
PNKP-221ENST00000627317 SPEM1Q8N4L4 309 aa15.25■□□□□ 0.03
PNKP-221ENST00000627317 BTN2A3PQ96KV6 586 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms