RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 NPY6RQ99463 290 aa17.37■□□□□ 0.37
UBE3D-208ENST00000626828 TSPY26PQ9H489 355 aa17.37■□□□□ 0.37
UBE3D-208ENST00000626828 POLR3BQ9NW08 1133 aaPredicted RBP17.37■□□□□ 0.37
UBE3D-208ENST00000626828 AIPL1Q9NZN9 384 aa17.37■□□□□ 0.37
UBE3D-208ENST00000626828 EBF1Q9UH73 591 aa17.37■□□□□ 0.37
UBE3D-208ENST00000626828 TMEM59LQ9UK28 342 aa17.37■□□□□ 0.37
UBE3D-208ENST00000626828 CLEC4EQ9ULY5 219 aa17.37■□□□□ 0.37
UBE3D-208ENST00000626828 SYNJ2BP-COX16A0A087WUM0 186 aa17.36■□□□□ 0.37
UBE3D-208ENST00000626828 TYW5A2RUC4 315 aaKnown RBP17.36■□□□□ 0.37
UBE3D-208ENST00000626828 GOLGA8SH3BPF8 625 aa17.36■□□□□ 0.37
UBE3D-208ENST00000626828 SGK1O00141 431 aa17.36■□□□□ 0.37
UBE3D-208ENST00000626828 NPC1O15118 1278 aa17.36■□□□□ 0.37
UBE3D-208ENST00000626828 GFRA3O60609 400 aa17.36■□□□□ 0.37
UBE3D-208ENST00000626828 TBL1XO60907 577 aa17.36■□□□□ 0.37
UBE3D-208ENST00000626828 MOCS2O96007 188 aaPredicted RBP17.36■□□□□ 0.37
UBE3D-208ENST00000626828 CHRM1P11229 460 aaPredicted RBP17.36■□□□□ 0.37
UBE3D-208ENST00000626828 HNRNPLP14866 589 aaKnown RBP eCLIP17.36■□□□□ 0.37
UBE3D-208ENST00000626828 HOXD9P28356 352 aaPredicted RBP17.36■□□□□ 0.37
UBE3D-208ENST00000626828 NTSR1P30989 418 aa17.36■□□□□ 0.37
UBE3D-208ENST00000626828 SLC6A4P31645 630 aa17.36■□□□□ 0.37
UBE3D-208ENST00000626828 DMWDQ09019 674 aa17.36■□□□□ 0.37
UBE3D-208ENST00000626828 NME3Q13232 169 aa17.36■□□□□ 0.37
UBE3D-208ENST00000626828 CLEC16AQ2KHT3 1053 aa17.36■□□□□ 0.37
UBE3D-208ENST00000626828 SLC25A52Q3SY17 297 aa17.36■□□□□ 0.37
UBE3D-208ENST00000626828 C2CD6Q53TS8 623 aa17.36■□□□□ 0.37
UBE3D-208ENST00000626828 MS4A13Q5J8X5 152 aa17.36■□□□□ 0.37
UBE3D-208ENST00000626828 SFMBT2Q5VUG0 894 aa17.36■□□□□ 0.37
UBE3D-208ENST00000626828 MMS22LQ6ZRQ5 1243 aa17.36■□□□□ 0.37
UBE3D-208ENST00000626828 SND1Q7KZF4 910 aaKnown RBP eCLIP17.36■□□□□ 0.37
UBE3D-208ENST00000626828 PHF13Q86YI8 300 aaPredicted RBP17.36■□□□□ 0.37
UBE3D-208ENST00000626828 CCDC117Q8IWD4 279 aaPredicted RBP17.36■□□□□ 0.37
UBE3D-208ENST00000626828 TSTD1Q8NFU3 115 aa17.36■□□□□ 0.37
UBE3D-208ENST00000626828 IQCDQ96DY2 449 aa17.36■□□□□ 0.37
UBE3D-208ENST00000626828 PGAP3Q96FM1 320 aaPredicted RBP17.36■□□□□ 0.37
UBE3D-208ENST00000626828 POLMQ9NP87 494 aaPredicted RBP17.36■□□□□ 0.37
UBE3D-208ENST00000626828 SEPT11Q9NVA2 429 aaKnown RBP17.36■□□□□ 0.37
UBE3D-208ENST00000626828 ELOVL2Q9NXB9 296 aa17.36■□□□□ 0.37
UBE3D-208ENST00000626828 ADAM22Q9P0K1 906 aa17.36■□□□□ 0.37
UBE3D-208ENST00000626828 COX16Q9P0S2 106 aa17.36■□□□□ 0.37
UBE3D-208ENST00000626828 PAXBP1Q9Y5B6 917 aa17.36■□□□□ 0.37
UBE3D-208ENST00000626828 KIAA1549LQ6ZVL6 1849 aa17.35■□□□□ 0.37
UBE3D-208ENST00000626828 PRR23AA6NEV1 266 aa17.35■□□□□ 0.37
UBE3D-208ENST00000626828 LRRC53A6NM62 1247 aa17.35■□□□□ 0.37
UBE3D-208ENST00000626828 AXIN1O15169 862 aa17.35■□□□□ 0.37
UBE3D-208ENST00000626828 HRO43593 1189 aa17.35■□□□□ 0.37
UBE3D-208ENST00000626828 ALDH1A2O94788 518 aa17.35■□□□□ 0.37
UBE3D-208ENST00000626828 CALB1P05937 261 aa17.35■□□□□ 0.37
UBE3D-208ENST00000626828 TPM3P06753 285 aa17.35■□□□□ 0.37
UBE3D-208ENST00000626828 PXNP49023 591 aaPredicted RBP17.35■□□□□ 0.37
UBE3D-208ENST00000626828 CENPCQ03188 943 aa17.35■□□□□ 0.37
UBE3D-208ENST00000626828 GEN1Q17RS7 908 aa17.35■□□□□ 0.37
UBE3D-208ENST00000626828 PPP1R2P3Q6NXS1 205 aa17.35■□□□□ 0.37
UBE3D-208ENST00000626828 ASCL5Q7RTU5 278 aa17.35■□□□□ 0.37
UBE3D-208ENST00000626828 ANKS1BQ7Z6G8 1248 aa17.35■□□□□ 0.37
UBE3D-208ENST00000626828 SUMF1Q8NBK3 374 aa17.35■□□□□ 0.37
UBE3D-208ENST00000626828 HJURPQ8NCD3 748 aaPredicted RBP17.35■□□□□ 0.37
UBE3D-208ENST00000626828 HHIPQ96QV1 700 aa17.35■□□□□ 0.37
UBE3D-208ENST00000626828 C11orf70Q9BRQ4 267 aa17.35■□□□□ 0.37
UBE3D-208ENST00000626828 NUCKS1Q9H1E3 243 aaKnown RBP17.35■□□□□ 0.37
UBE3D-208ENST00000626828 EPC1Q9H2F5 836 aa17.35■□□□□ 0.37
UBE3D-208ENST00000626828 WDCPQ9H6R7 721 aa17.35■□□□□ 0.37
UBE3D-208ENST00000626828 IFNKQ9P0W0 207 aa17.35■□□□□ 0.37
UBE3D-208ENST00000626828 HCN2Q9UL51 889 aa17.35■□□□□ 0.37
UBE3D-208ENST00000626828 GPR179Q6PRD1 2367 aa17.35■□□□□ 0.37
UBE3D-208ENST00000626828 FAM170AA1A519 330 aa17.34■□□□□ 0.37
UBE3D-208ENST00000626828 ADAM23O75077 832 aa17.34■□□□□ 0.37
UBE3D-208ENST00000626828 TACR2P21452 398 aa17.34■□□□□ 0.37
UBE3D-208ENST00000626828 HOXC13P31276 330 aa17.34■□□□□ 0.37
UBE3D-208ENST00000626828 PBX1P40424 430 aa17.34■□□□□ 0.37
UBE3D-208ENST00000626828 CXCR3P49682 368 aa17.34■□□□□ 0.37
UBE3D-208ENST00000626828 SULT1E1P49888 294 aa17.34■□□□□ 0.37
UBE3D-208ENST00000626828 DEUP1Q05D60 604 aa17.34■□□□□ 0.37
UBE3D-208ENST00000626828 EIF4HQ15056 248 aaKnown RBP17.34■□□□□ 0.37
UBE3D-208ENST00000626828 ASIC2Q16515 512 aa17.34■□□□□ 0.37
UBE3D-208ENST00000626828 BRMS1LQ5PSV4 323 aa17.34■□□□□ 0.37
UBE3D-208ENST00000626828 EGFLAMQ63HQ2 1017 aa17.34■□□□□ 0.37
UBE3D-208ENST00000626828 RNF43Q68DV7 783 aa17.34■□□□□ 0.37
UBE3D-208ENST00000626828 ACAD10Q6JQN1 1059 aa17.34■□□□□ 0.37
UBE3D-208ENST00000626828 SPAG17Q6Q759 2223 aa17.34■□□□□ 0.37
UBE3D-208ENST00000626828 TMEM92Q6UXU6 159 aa17.34■□□□□ 0.37
UBE3D-208ENST00000626828 CHPFQ8IZ52 775 aa17.34■□□□□ 0.37
UBE3D-208ENST00000626828 LGI2Q8N0V4 545 aa17.34■□□□□ 0.37
UBE3D-208ENST00000626828 FIBINQ8TAL6 211 aa17.34■□□□□ 0.37
UBE3D-208ENST00000626828 WFIKKN2Q8TEU8 576 aa17.34■□□□□ 0.37
UBE3D-208ENST00000626828 TTYH3Q9C0H2 523 aa17.34■□□□□ 0.37
UBE3D-208ENST00000626828 STIM2Q9P246 746 aa17.34■□□□□ 0.37
UBE3D-208ENST00000626828 XPO7Q9UIA9 1087 aaKnown RBP17.34■□□□□ 0.37
UBE3D-208ENST00000626828 RAB23Q9ULC3 237 aa17.34■□□□□ 0.37
UBE3D-208ENST00000626828 OTOGLQ3ZCN5 2332 aa17.33■□□□□ 0.37
UBE3D-208ENST00000626828 A0A1W2PQJ5 194 aa17.33■□□□□ 0.36
UBE3D-208ENST00000626828 F5H5T6 163 aa17.33■□□□□ 0.36
UBE3D-208ENST00000626828 ZBTB24O43167 697 aaPredicted RBP17.33■□□□□ 0.36
UBE3D-208ENST00000626828 KRT3P12035 628 aa17.33■□□□□ 0.36
UBE3D-208ENST00000626828 HLA-FP30511 346 aa17.33■□□□□ 0.36
UBE3D-208ENST00000626828 FLT3P36888 993 aa17.33■□□□□ 0.36
UBE3D-208ENST00000626828 PRKCIP41743 596 aa17.33■□□□□ 0.36
UBE3D-208ENST00000626828 SGSHP51688 502 aa17.33■□□□□ 0.36
UBE3D-208ENST00000626828 RPS24P62847 133 aaKnown RBP17.33■□□□□ 0.36
UBE3D-208ENST00000626828 C1QBPQ07021 282 aaKnown RBP17.33■□□□□ 0.36
UBE3D-208ENST00000626828 PTP4A2Q12974 167 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms