RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 SDHBP21912 280 aa23.2■■□□□ 1.3
SF1-220ENST00000626028 NOS2P35228 1153 aa23.2■■□□□ 1.3
SF1-220ENST00000626028 SOX5P35711 763 aa23.2■■□□□ 1.3
SF1-220ENST00000626028 LMNB2Q03252 620 aa23.2■■□□□ 1.3
SF1-220ENST00000626028 UBXN1Q04323 297 aa23.2■■□□□ 1.3
SF1-220ENST00000626028 FAM183BPQ6ZVS7 135 aa23.2■■□□□ 1.3
SF1-220ENST00000626028 APTXQ7Z2E3 356 aaKnown RBP23.2■■□□□ 1.3
SF1-220ENST00000626028 KIAA2013Q8IYS2 634 aa23.2■■□□□ 1.3
SF1-220ENST00000626028 AOPEPQ8N6M6 819 aa23.2■■□□□ 1.3
SF1-220ENST00000626028 C18orf8Q96DM3 657 aa23.2■■□□□ 1.3
SF1-220ENST00000626028 SPACA7Q96KW9 195 aa23.2■■□□□ 1.3
SF1-220ENST00000626028 SPAG5Q96R06 1193 aa23.2■■□□□ 1.3
SF1-220ENST00000626028 CD248Q9HCU0 757 aa23.2■■□□□ 1.3
SF1-220ENST00000626028 BCCIPQ9P287 314 aaKnown RBP eCLIP23.2■■□□□ 1.3
SF1-220ENST00000626028 TJP2Q9UDY2 1190 aa23.2■■□□□ 1.3
SF1-220ENST00000626028 TCRBV21S2A2A0A5A6 115 aa23.19■■□□□ 1.3
SF1-220ENST00000626028 PRR5-ARHGAP8B1AHC4 643 aa23.19■■□□□ 1.3
SF1-220ENST00000626028 DAB1O75553 588 aa23.19■■□□□ 1.3
SF1-220ENST00000626028 TGM1P22735 817 aa23.19■■□□□ 1.3
SF1-220ENST00000626028 CCR1P32246 355 aa23.19■■□□□ 1.3
SF1-220ENST00000626028 STAT1P42224 750 aa23.19■■□□□ 1.3
SF1-220ENST00000626028 MATKP42679 507 aa23.19■■□□□ 1.3
SF1-220ENST00000626028 ARHGAP8P85298 464 aa23.19■■□□□ 1.3
SF1-220ENST00000626028 SYCP1Q15431 976 aa23.19■■□□□ 1.3
SF1-220ENST00000626028 CSRP2Q16527 193 aa23.19■■□□□ 1.3
SF1-220ENST00000626028 LPAL2Q16609 132 aa23.19■■□□□ 1.3
SF1-220ENST00000626028 PLK5Q496M5 336 aa23.19■■□□□ 1.3
SF1-220ENST00000626028 SPDYCQ5MJ68 293 aa23.19■■□□□ 1.3
SF1-220ENST00000626028 OR6B2Q6IFH4 312 aa23.19■■□□□ 1.3
SF1-220ENST00000626028 ARCQ7LC44 396 aa23.19■■□□□ 1.3
SF1-220ENST00000626028 NOP9Q86U38 636 aaKnown RBP23.19■■□□□ 1.3
SF1-220ENST00000626028 KBTBD6Q86V97 674 aa23.19■■□□□ 1.3
SF1-220ENST00000626028 ERICH1Q86X53 443 aa23.19■■□□□ 1.3
SF1-220ENST00000626028 DEFB106AQ8N104 65 aa23.19■■□□□ 1.3
SF1-220ENST00000626028 AHI1Q8N157 1196 aa23.19■■□□□ 1.3
SF1-220ENST00000626028 ATP6V0D2Q8N8Y2 350 aa23.19■■□□□ 1.3
SF1-220ENST00000626028 DUSP15Q9H1R2 295 aaPredicted RBP23.19■■□□□ 1.3
SF1-220ENST00000626028 MUC22E2RYF6 1773 aaPredicted RBP23.19■■□□□ 1.3
SF1-220ENST00000626028 PI4KAP42356 2102 aa23.18■■□□□ 1.3
SF1-220ENST00000626028 TSPAN3O60637 253 aa23.18■■□□□ 1.3
SF1-220ENST00000626028 EPN2O95208 641 aa23.18■■□□□ 1.3
SF1-220ENST00000626028 HLA-FP30511 346 aa23.18■■□□□ 1.3
SF1-220ENST00000626028 SLC6A4P31645 630 aa23.18■■□□□ 1.3
SF1-220ENST00000626028 P2RY2P41231 377 aa23.18■■□□□ 1.3
SF1-220ENST00000626028 CDR2Q01850 454 aa23.18■■□□□ 1.3
SF1-220ENST00000626028 TAF5Q15542 800 aa23.18■■□□□ 1.3
SF1-220ENST00000626028 MS4A13Q5J8X5 152 aa23.18■■□□□ 1.3
SF1-220ENST00000626028 NADSYN1Q6IA69 706 aa23.18■■□□□ 1.3
SF1-220ENST00000626028 TRIM72Q6ZMU5 477 aa23.18■■□□□ 1.3
SF1-220ENST00000626028 CCDC117Q8IWD4 279 aaPredicted RBP23.18■■□□□ 1.3
SF1-220ENST00000626028 FIBINQ8TAL6 211 aa23.18■■□□□ 1.3
SF1-220ENST00000626028 ADAM32Q8TC27 787 aa23.18■■□□□ 1.3
SF1-220ENST00000626028 HMGB4Q8WW32 186 aa23.18■■□□□ 1.3
SF1-220ENST00000626028 ACOX2Q99424 681 aa23.18■■□□□ 1.3
SF1-220ENST00000626028 FAM204AQ9H8W3 233 aa23.18■■□□□ 1.3
SF1-220ENST00000626028 NOCTQ9UK39 431 aaKnown RBP23.18■■□□□ 1.3
SF1-220ENST00000626028 CLEC4EQ9ULY5 219 aa23.18■■□□□ 1.3
SF1-220ENST00000626028 PAXBP1Q9Y5B6 917 aa23.18■■□□□ 1.3
SF1-220ENST00000626028 STON1Q9Y6Q2 735 aa23.18■■□□□ 1.3
SF1-220ENST00000626028 KCNU1A8MYU2 1149 aa23.17■■□□□ 1.3
SF1-220ENST00000626028 TBL1XO60907 577 aa23.17■■□□□ 1.3
SF1-220ENST00000626028 ZNF217O75362 1048 aa23.17■■□□□ 1.3
SF1-220ENST00000626028 CAVIN2O95810 425 aa23.17■■□□□ 1.3
SF1-220ENST00000626028 ABCB4P21439 1286 aa23.17■■□□□ 1.3
SF1-220ENST00000626028 KLK7P49862 253 aa23.17■■□□□ 1.3
SF1-220ENST00000626028 ZNF165P49910 485 aa23.17■■□□□ 1.3
SF1-220ENST00000626028 STARD3Q14849 445 aa23.17■■□□□ 1.3
SF1-220ENST00000626028 ACBD5Q5T8D3 534 aaPredicted RBP23.17■■□□□ 1.3
SF1-220ENST00000626028 TTC39BQ5VTQ0 682 aaPredicted RBP23.17■■□□□ 1.3
SF1-220ENST00000626028 RFWD3Q6PCD5 774 aa23.17■■□□□ 1.3
SF1-220ENST00000626028 NT5C3BQ969T7 300 aa23.17■■□□□ 1.3
SF1-220ENST00000626028 PCMTD1Q96MG8 357 aaPredicted RBP23.17■■□□□ 1.3
SF1-220ENST00000626028 TPSD1Q9BZJ3 242 aa23.17■■□□□ 1.3
SF1-220ENST00000626028 ZDHHC4Q9NPG8 344 aa23.17■■□□□ 1.3
SF1-220ENST00000626028 NLRC4Q9NPP4 1024 aa23.17■■□□□ 1.3
SF1-220ENST00000626028 DDIT4Q9NX09 232 aa23.17■■□□□ 1.3
SF1-220ENST00000626028 GGA2Q9UJY4 613 aa23.17■■□□□ 1.3
SF1-220ENST00000626028 STAP1Q9ULZ2 295 aa23.17■■□□□ 1.3
SF1-220ENST00000626028 DOCK4Q8N1I0 1966 aa23.17■■□□□ 1.3
SF1-220ENST00000626028 DCHS1Q96JQ0 3298 aa23.16■■□□□ 1.3
SF1-220ENST00000626028 GFPT2O94808 682 aa23.16■■□□□ 1.3
SF1-220ENST00000626028 F9P00740 461 aa23.16■■□□□ 1.3
SF1-220ENST00000626028 ATP5BP06576 529 aaKnown RBP23.16■■□□□ 1.3
SF1-220ENST00000626028 CCDC172P0C7W6 258 aa23.16■■□□□ 1.3
SF1-220ENST00000626028 PABPC1P11940 636 aaKnown RBP23.16■■□□□ 1.3
SF1-220ENST00000626028 GABRG2P18507 467 aa23.16■■□□□ 1.3
SF1-220ENST00000626028 NOMO3P69849 1222 aa23.16■■□□□ 1.3
SF1-220ENST00000626028 ARID5AQ03989 594 aa23.16■■□□□ 1.3
SF1-220ENST00000626028 SPEM2Q0P670 501 aa23.16■■□□□ 1.3
SF1-220ENST00000626028 ZC3H12AQ5D1E8 599 aaKnown RBP23.16■■□□□ 1.3
SF1-220ENST00000626028 PMS2CLQ68D20 193 aa23.16■■□□□ 1.3
SF1-220ENST00000626028 METTL3Q86U44 580 aaKnown RBP23.16■■□□□ 1.3
SF1-220ENST00000626028 DHX40Q8IX18 779 aaKnown RBP23.16■■□□□ 1.3
SF1-220ENST00000626028 PGBD3Q8N328 593 aa23.16■■□□□ 1.3
SF1-220ENST00000626028 PGAP3Q96FM1 320 aaPredicted RBP23.16■■□□□ 1.3
SF1-220ENST00000626028 FUCA2Q9BTY2 467 aa23.16■■□□□ 1.3
SF1-220ENST00000626028 CIPCQ9C0C6 399 aa23.16■■□□□ 1.3
SF1-220ENST00000626028 SEMA4GQ9NTN9 838 aa23.16■■□□□ 1.3
SF1-220ENST00000626028 CACNA2D2Q9NY47 1150 aa23.16■■□□□ 1.3
SF1-220ENST00000626028 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms