RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 PITPNM1O00562 1244 aa20.29■□□□□ 0.84
TREX1-205ENST00000625293 OR4Q2P0C623 313 aa20.29■□□□□ 0.84
TREX1-205ENST00000625293 TPSB2P20231 275 aa20.29■□□□□ 0.84
TREX1-205ENST00000625293 GLUD2P49448 558 aa20.29■□□□□ 0.84
TREX1-205ENST00000625293 SLC5A3P53794 718 aa20.29■□□□□ 0.84
TREX1-205ENST00000625293 TPSAB1Q15661 275 aa20.29■□□□□ 0.84
TREX1-205ENST00000625293 HEATR6Q6AI08 1181 aaKnown RBP20.29■□□□□ 0.84
TREX1-205ENST00000625293 CAPN12Q6ZSI9 719 aa20.29■□□□□ 0.84
TREX1-205ENST00000625293 CAND1Q86VP6 1230 aaKnown RBP20.29■□□□□ 0.84
TREX1-205ENST00000625293 DQX1Q8TE96 717 aaKnown RBP20.29■□□□□ 0.84
TREX1-205ENST00000625293 ZNF473Q8WTR7 871 aaKnown RBP20.29■□□□□ 0.84
TREX1-205ENST00000625293 TRIM62Q9BVG3 475 aa20.29■□□□□ 0.84
TREX1-205ENST00000625293 PPP1R12CQ9BZL4 782 aa20.29■□□□□ 0.84
TREX1-205ENST00000625293 ACSS3Q9H6R3 686 aa20.29■□□□□ 0.84
TREX1-205ENST00000625293 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.29■□□□□ 0.84
TREX1-205ENST00000625293 TBK1Q9UHD2 729 aa20.29■□□□□ 0.84
TREX1-205ENST00000625293 A0A0A0MRY4 1105 aa20.29■□□□□ 0.84
TREX1-205ENST00000625293 SYN3O14994 580 aa20.29■□□□□ 0.84
TREX1-205ENST00000625293 ELK3P41970 407 aa20.29■□□□□ 0.84
TREX1-205ENST00000625293 MAGEA3P43357 314 aa20.29■□□□□ 0.84
TREX1-205ENST00000625293 CCT5P48643 541 aa20.29■□□□□ 0.84
TREX1-205ENST00000625293 ZNF135P52742 658 aaPredicted RBP20.29■□□□□ 0.84
TREX1-205ENST00000625293 SEMA5AQ13591 1074 aa20.29■□□□□ 0.84
TREX1-205ENST00000625293 TCTN1Q2MV58 587 aa20.29■□□□□ 0.84
TREX1-205ENST00000625293 ARL13BQ3SXY8 428 aa20.29■□□□□ 0.84
TREX1-205ENST00000625293 SLC39A12Q504Y0 691 aa20.29■□□□□ 0.84
TREX1-205ENST00000625293 C3orf62Q6ZUJ4 267 aa20.29■□□□□ 0.84
TREX1-205ENST00000625293 ZNF534Q76KX8 674 aa20.29■□□□□ 0.84
TREX1-205ENST00000625293 VPS52Q8N1B4 723 aa20.29■□□□□ 0.84
TREX1-205ENST00000625293 CRIPAKQ8N1N5 446 aa20.29■□□□□ 0.84
TREX1-205ENST00000625293 SPATA13Q96N96 652 aa20.29■□□□□ 0.84
TREX1-205ENST00000625293 CASD1Q96PB1 797 aa20.29■□□□□ 0.84
TREX1-205ENST00000625293 LGMNQ99538 433 aa20.29■□□□□ 0.84
TREX1-205ENST00000625293 INTS9Q9NV88 658 aaKnown RBP20.29■□□□□ 0.84
TREX1-205ENST00000625293 TBX21Q9UL17 535 aa20.29■□□□□ 0.84
TREX1-205ENST00000625293 TMEM120BA0PK00 339 aa20.28■□□□□ 0.84
TREX1-205ENST00000625293 ERCC2P18074 760 aa20.28■□□□□ 0.84
TREX1-205ENST00000625293 NR1H3Q13133 447 aa20.28■□□□□ 0.84
TREX1-205ENST00000625293 MTM1Q13496 603 aa20.28■□□□□ 0.84
TREX1-205ENST00000625293 MRPL58Q14197 206 aaKnown RBP20.28■□□□□ 0.84
TREX1-205ENST00000625293 PDK1Q15118 436 aa20.28■□□□□ 0.84
TREX1-205ENST00000625293 TMED2Q15363 201 aa20.28■□□□□ 0.84
TREX1-205ENST00000625293 TRABD2AQ86V40 505 aa20.28■□□□□ 0.84
TREX1-205ENST00000625293 DCP1BQ8IZD4 617 aaKnown RBP20.28■□□□□ 0.84
TREX1-205ENST00000625293 FUBP3Q96I24 572 aaKnown RBP eCLIP20.28■□□□□ 0.84
TREX1-205ENST00000625293 FAM193BQ96PV7 902 aaPredicted RBP20.28■□□□□ 0.84
TREX1-205ENST00000625293 WDCPQ9H6R7 721 aa20.28■□□□□ 0.84
TREX1-205ENST00000625293 PRKAG2Q9UGJ0 569 aa20.28■□□□□ 0.84
TREX1-205ENST00000625293 CHMP2BQ9UQN3 213 aa20.28■□□□□ 0.84
TREX1-205ENST00000625293 RAD54BQ9Y620 910 aa20.28■□□□□ 0.84
TREX1-205ENST00000625293 POC1B-GALNT4F8VUJ3 575 aa20.27■□□□□ 0.84
TREX1-205ENST00000625293 CYP2C18P33260 490 aa20.27■□□□□ 0.84
TREX1-205ENST00000625293 GRIK1P39086 918 aa20.27■□□□□ 0.84
TREX1-205ENST00000625293 YWHAGP61981 247 aaKnown RBP eCLIP20.27■□□□□ 0.84
TREX1-205ENST00000625293 MPP2Q14168 576 aa20.27■□□□□ 0.84
TREX1-205ENST00000625293 ANKRD20A2Q5SQ80 823 aa20.27■□□□□ 0.84
TREX1-205ENST00000625293 VARS2Q5ST30 1063 aaKnown RBP20.27■□□□□ 0.84
TREX1-205ENST00000625293 SYCP2LQ5T4T6 812 aa20.27■□□□□ 0.84
TREX1-205ENST00000625293 ANKRD20A1Q5TYW2 823 aa20.27■□□□□ 0.84
TREX1-205ENST00000625293 ANKRD20A3Q5VUR7 823 aa20.27■□□□□ 0.84
TREX1-205ENST00000625293 SCD5Q86SK9 330 aa20.27■□□□□ 0.84
TREX1-205ENST00000625293 PALM2Q8IXS6 379 aa20.27■□□□□ 0.84
TREX1-205ENST00000625293 FBF1Q8TES7 1133 aa20.27■□□□□ 0.84
TREX1-205ENST00000625293 ZNF317Q96PQ6 595 aaPredicted RBP20.27■□□□□ 0.84
TREX1-205ENST00000625293 GDF15Q99988 308 aa20.27■□□□□ 0.84
TREX1-205ENST00000625293 TKTL2Q9H0I9 626 aa20.27■□□□□ 0.84
TREX1-205ENST00000625293 PRDM12Q9H4Q4 367 aa20.27■□□□□ 0.84
TREX1-205ENST00000625293 KIAA0355O15063 1070 aa20.26■□□□□ 0.83
TREX1-205ENST00000625293 AVILO75366 819 aa20.26■□□□□ 0.83
TREX1-205ENST00000625293 TADA2AO75478 443 aa20.26■□□□□ 0.83
TREX1-205ENST00000625293 APRTP07741 180 aa20.26■□□□□ 0.83
TREX1-205ENST00000625293 BRAFP15056 766 aa20.26■□□□□ 0.83
TREX1-205ENST00000625293 GEMIN4P57678 1058 aaKnown RBP20.26■□□□□ 0.83
TREX1-205ENST00000625293 TPI1P60174 286 aa20.26■□□□□ 0.83
TREX1-205ENST00000625293 EFTUD2Q15029 972 aaKnown RBP eCLIP20.26■□□□□ 0.83
TREX1-205ENST00000625293 KLHL38Q2WGJ6 581 aa20.26■□□□□ 0.83
TREX1-205ENST00000625293 TP53INP2Q8IXH6 220 aa20.26■□□□□ 0.83
TREX1-205ENST00000625293 SEPT8Q92599 483 aa20.26■□□□□ 0.83
TREX1-205ENST00000625293 P2RY11Q96G91 374 aa20.26■□□□□ 0.83
TREX1-205ENST00000625293 ABCC13Q9NSE7 274 aa20.26■□□□□ 0.83
TREX1-205ENST00000625293 MARCH5Q9NX47 278 aa20.26■□□□□ 0.83
TREX1-205ENST00000625293 ARHGEF38Q9NXL2 777 aa20.26■□□□□ 0.83
TREX1-205ENST00000625293 PSMC3IPQ9P2W1 217 aaPredicted RBP20.26■□□□□ 0.83
TREX1-205ENST00000625293 RSPH14Q9UHP6 348 aa20.26■□□□□ 0.83
TREX1-205ENST00000625293 PCDHB7Q9Y5E2 793 aa20.26■□□□□ 0.83
TREX1-205ENST00000625293 PPP1R12AO14974 1030 aaPredicted RBP20.26■□□□□ 0.83
TREX1-205ENST00000625293 IRAK2O43187 625 aa20.26■□□□□ 0.83
TREX1-205ENST00000625293 SPAG6O75602 509 aa20.26■□□□□ 0.83
TREX1-205ENST00000625293 C1QAP02745 245 aa20.26■□□□□ 0.83
TREX1-205ENST00000625293 RAG1P15918 1043 aa20.26■□□□□ 0.83
TREX1-205ENST00000625293 PGFP49763 221 aa20.26■□□□□ 0.83
TREX1-205ENST00000625293 GATMP50440 423 aa20.26■□□□□ 0.83
TREX1-205ENST00000625293 WASHC5Q12768 1159 aa20.26■□□□□ 0.83
TREX1-205ENST00000625293 NFE2Q16621 373 aaPredicted RBP20.26■□□□□ 0.83
TREX1-205ENST00000625293 ARHGEF18Q6ZSZ5 1173 aa20.26■□□□□ 0.83
TREX1-205ENST00000625293 SRRM1Q8IYB3 904 aaKnown RBP20.26■□□□□ 0.83
TREX1-205ENST00000625293 NETO2Q8NC67 525 aa20.26■□□□□ 0.83
TREX1-205ENST00000625293 APBB2Q92870 758 aa20.26■□□□□ 0.83
TREX1-205ENST00000625293 C8orf48Q96LL4 319 aa20.26■□□□□ 0.83
TREX1-205ENST00000625293 OSBPL2Q9H1P3 480 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms