RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 TMEM126BQ8IUX1 230 aa14.52□□□□□ -0.09
LDB3-209ENST00000623056 CCDC60Q8IWA6 550 aaPredicted RBP14.52□□□□□ -0.09
LDB3-209ENST00000623056 LILRA2Q8N149 483 aa14.52□□□□□ -0.09
LDB3-209ENST00000623056 DEPTORQ8TB45 409 aa14.52□□□□□ -0.09
LDB3-209ENST00000623056 PRPF31Q8WWY3 499 aaKnown RBP14.52□□□□□ -0.09
LDB3-209ENST00000623056 RNF157Q96PX1 679 aa14.52□□□□□ -0.09
LDB3-209ENST00000623056 LHX5Q9H2C1 402 aa14.52□□□□□ -0.09
LDB3-209ENST00000623056 COPS7BQ9H9Q2 264 aaPredicted RBP14.52□□□□□ -0.09
LDB3-209ENST00000623056 MOCS1Q9NZB8 636 aa14.52□□□□□ -0.09
LDB3-209ENST00000623056 DKC1O60832 514 aaKnown RBP eCLIP14.51□□□□□ -0.09
LDB3-209ENST00000623056 PSAPP07602 524 aa14.51□□□□□ -0.09
LDB3-209ENST00000623056 CD1EP15812 388 aa14.51□□□□□ -0.09
LDB3-209ENST00000623056 ASPAP45381 313 aa14.51□□□□□ -0.09
LDB3-209ENST00000623056 NUDT2P50583 147 aa14.51□□□□□ -0.09
LDB3-209ENST00000623056 THOP1P52888 689 aa14.51□□□□□ -0.09
LDB3-209ENST00000623056 COG7P83436 770 aa14.51□□□□□ -0.09
LDB3-209ENST00000623056 FLOT2Q14254 428 aa14.51□□□□□ -0.09
LDB3-209ENST00000623056 ARHGEF16Q5VV41 709 aa14.51□□□□□ -0.09
LDB3-209ENST00000623056 KLHL35Q6PF15 583 aa14.51□□□□□ -0.09
LDB3-209ENST00000623056 WDR49Q8IV35 697 aa14.51□□□□□ -0.09
LDB3-209ENST00000623056 BRSK2Q8IWQ3 736 aa14.51□□□□□ -0.09
LDB3-209ENST00000623056 LENG8Q96PV6 779 aaPredicted RBP14.51□□□□□ -0.09
LDB3-209ENST00000623056 XPNPEP3Q9NQH7 507 aa14.51□□□□□ -0.09
LDB3-209ENST00000623056 ASNSD1Q9NWL6 643 aa14.51□□□□□ -0.09
LDB3-209ENST00000623056 PRPF19Q9UMS4 504 aaKnown RBP14.51□□□□□ -0.09
LDB3-209ENST00000623056 AK5Q9Y6K8 562 aa14.51□□□□□ -0.09
LDB3-209ENST00000623056 A0A1B0GTW7 788 aa14.5□□□□□ -0.09
LDB3-209ENST00000623056 TTC36A6NLP5 189 aa14.5□□□□□ -0.09
LDB3-209ENST00000623056 AIM2O14862 343 aa14.5□□□□□ -0.09
LDB3-209ENST00000623056 ADCY6O43306 1168 aa14.5□□□□□ -0.09
LDB3-209ENST00000623056 TRPA1O75762 1119 aa14.5□□□□□ -0.09
LDB3-209ENST00000623056 METTL18O95568 372 aa14.5□□□□□ -0.09
LDB3-209ENST00000623056 HMGCRP04035 888 aa14.5□□□□□ -0.09
LDB3-209ENST00000623056 RALBP11234 206 aa14.5□□□□□ -0.09
LDB3-209ENST00000623056 GRIA1P42261 906 aa14.5□□□□□ -0.09
LDB3-209ENST00000623056 LPIN1Q14693 890 aa14.5□□□□□ -0.09
LDB3-209ENST00000623056 ACAP1Q15027 740 aa14.5□□□□□ -0.09
LDB3-209ENST00000623056 ZFP1Q6P2D0 407 aa14.5□□□□□ -0.09
LDB3-209ENST00000623056 EPGNQ6UW88 154 aa14.5□□□□□ -0.09
LDB3-209ENST00000623056 GALNT4Q8N4A0 578 aa14.5□□□□□ -0.09
LDB3-209ENST00000623056 ATP2A3Q93084 1043 aa14.5□□□□□ -0.09
LDB3-209ENST00000623056 HSPBAP1Q96EW2 488 aa14.5□□□□□ -0.09
LDB3-209ENST00000623056 SERPINI1Q99574 410 aa14.5□□□□□ -0.09
LDB3-209ENST00000623056 RNPEPQ9H4A4 650 aa14.5□□□□□ -0.09
LDB3-209ENST00000623056 COG4Q9H9E3 785 aa14.5□□□□□ -0.09
LDB3-209ENST00000623056 COPG2Q9UBF2 871 aa14.5□□□□□ -0.09
LDB3-209ENST00000623056 DCDC2Q9UHG0 476 aa14.5□□□□□ -0.09
LDB3-209ENST00000623056 PADI4Q9UM07 663 aa14.5□□□□□ -0.09
LDB3-209ENST00000623056 BCLAF3A2AJT9 711 aaKnown RBP14.5□□□□□ -0.09
LDB3-209ENST00000623056 XRCC1P18887 633 aaPredicted RBP14.5□□□□□ -0.09
LDB3-209ENST00000623056 BAG6P46379 1132 aa14.5□□□□□ -0.09
LDB3-209ENST00000623056 HSPA13P48723 471 aa14.5□□□□□ -0.09
LDB3-209ENST00000623056 AP3M2P53677 418 aa14.5□□□□□ -0.09
LDB3-209ENST00000623056 PRKG1Q13976 671 aa14.5□□□□□ -0.09
LDB3-209ENST00000623056 SLC9B1Q4ZJI4 515 aa14.5□□□□□ -0.09
LDB3-209ENST00000623056 TRIM67Q6ZTA4 783 aa14.5□□□□□ -0.09
LDB3-209ENST00000623056 KBTBD7Q8WVZ9 684 aa14.5□□□□□ -0.09
LDB3-209ENST00000623056 OXCT2Q9BYC2 517 aaPredicted RBP14.5□□□□□ -0.09
LDB3-209ENST00000623056 SLC2A11Q9BYW1 496 aa14.5□□□□□ -0.09
LDB3-209ENST00000623056 CLRN2A0PK11 232 aa14.49□□□□□ -0.09
LDB3-209ENST00000623056 MED7O43513 233 aa14.49□□□□□ -0.09
LDB3-209ENST00000623056 MSX2P35548 267 aaPredicted RBP14.49□□□□□ -0.09
LDB3-209ENST00000623056 SERPINB5P36952 375 aa14.49□□□□□ -0.09
LDB3-209ENST00000623056 BCAR1P56945 870 aa14.49□□□□□ -0.09
LDB3-209ENST00000623056 ORC1Q13415 861 aa14.49□□□□□ -0.09
LDB3-209ENST00000623056 TRPC3Q13507 836 aa14.49□□□□□ -0.09
LDB3-209ENST00000623056 PDK1Q15118 436 aa14.49□□□□□ -0.09
LDB3-209ENST00000623056 ADRM1Q16186 407 aa14.49□□□□□ -0.09
LDB3-209ENST00000623056 ZNF423Q2M1K9 1284 aa14.49□□□□□ -0.09
LDB3-209ENST00000623056 ZNF699Q32M78 642 aa14.49□□□□□ -0.09
LDB3-209ENST00000623056 C16orf89Q6UX73 402 aa14.49□□□□□ -0.09
LDB3-209ENST00000623056 PACS1Q6VY07 963 aa14.49□□□□□ -0.09
LDB3-209ENST00000623056 LRRC43Q8N309 656 aa14.49□□□□□ -0.09
LDB3-209ENST00000623056 PQLC3Q8N755 202 aa14.49□□□□□ -0.09
LDB3-209ENST00000623056 FNDC8Q8TC99 324 aa14.49□□□□□ -0.09
LDB3-209ENST00000623056 GFM2Q969S9 779 aaKnown RBP14.49□□□□□ -0.09
LDB3-209ENST00000623056 MCRS1Q96EZ8 462 aa14.49□□□□□ -0.09
LDB3-209ENST00000623056 CDRT15Q96T59 188 aa14.49□□□□□ -0.09
LDB3-209ENST00000623056 PKP2Q99959 881 aa14.49□□□□□ -0.09
LDB3-209ENST00000623056 ADPGKQ9BRR6 497 aa14.49□□□□□ -0.09
LDB3-209ENST00000623056 MAP3K20Q9NYL2 800 aaKnown RBP14.49□□□□□ -0.09
LDB3-209ENST00000623056 TMEM216Q9P0N5 145 aa14.49□□□□□ -0.09
LDB3-209ENST00000623056 RSL24D1Q9UHA3 163 aaKnown RBP14.49□□□□□ -0.09
LDB3-209ENST00000623056 ZNF646O15015 1829 aaPredicted RBP14.49□□□□□ -0.09
LDB3-209ENST00000623056 APOL1O14791 398 aa14.49□□□□□ -0.09
LDB3-209ENST00000623056 KCNA2P16389 499 aa14.49□□□□□ -0.09
LDB3-209ENST00000623056 IL4RP24394 825 aa14.49□□□□□ -0.09
LDB3-209ENST00000623056 GMPRP36959 345 aa14.49□□□□□ -0.09
LDB3-209ENST00000623056 NAMPTP43490 491 aa14.49□□□□□ -0.09
LDB3-209ENST00000623056 RAP1GAPP47736 663 aa14.49□□□□□ -0.09
LDB3-209ENST00000623056 ZNF143P52747 638 aaPredicted RBP14.49□□□□□ -0.09
LDB3-209ENST00000623056 PPM1JQ5JR12 505 aa14.49□□□□□ -0.09
LDB3-209ENST00000623056 FAM102AQ5T9C2 384 aaPredicted RBP14.49□□□□□ -0.09
LDB3-209ENST00000623056 LRRC8BQ6P9F7 803 aa14.49□□□□□ -0.09
LDB3-209ENST00000623056 SNX32Q86XE0 403 aa14.49□□□□□ -0.09
LDB3-209ENST00000623056 ZNF781Q8N8C0 355 aa14.49□□□□□ -0.09
LDB3-209ENST00000623056 MAPK15Q8TD08 544 aa14.49□□□□□ -0.09
LDB3-209ENST00000623056 SLC7A3Q8WY07 619 aa14.49□□□□□ -0.09
LDB3-209ENST00000623056 CDH19Q9H159 772 aa14.49□□□□□ -0.09
LDB3-209ENST00000623056 PORCNQ9H237 461 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms