RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 EURLQ9NYK6 297 aa16.87■□□□□ 0.29
LDB3-208ENST00000623007 CLIC5Q9NZA1 410 aa16.87■□□□□ 0.29
LDB3-208ENST00000623007 IL37Q9NZH6 218 aa16.87■□□□□ 0.29
LDB3-208ENST00000623007 COX16Q9P0S2 106 aa16.87■□□□□ 0.29
LDB3-208ENST00000623007 TEX264Q9Y6I9 313 aa16.87■□□□□ 0.29
LDB3-208ENST00000623007 NDUFAB1O14561 156 aa16.86■□□□□ 0.29
LDB3-208ENST00000623007 ERCC2P18074 760 aa16.86■□□□□ 0.29
LDB3-208ENST00000623007 DNAJB2P25686 324 aa16.86■□□□□ 0.29
LDB3-208ENST00000623007 GBP2P32456 591 aaPredicted RBP16.86■□□□□ 0.29
LDB3-208ENST00000623007 SLC10A2Q12908 348 aaPredicted RBP16.86■□□□□ 0.29
LDB3-208ENST00000623007 GPR17Q13304 367 aa16.86■□□□□ 0.29
LDB3-208ENST00000623007 KCTD19Q17RG1 926 aaPredicted RBP16.86■□□□□ 0.29
LDB3-208ENST00000623007 BBS9Q3SYG4 887 aa16.86■□□□□ 0.29
LDB3-208ENST00000623007 ANKRD20A2Q5SQ80 823 aa16.86■□□□□ 0.29
LDB3-208ENST00000623007 LGSNQ5TDP6 509 aa16.86■□□□□ 0.29
LDB3-208ENST00000623007 ANKRD20A1Q5TYW2 823 aa16.86■□□□□ 0.29
LDB3-208ENST00000623007 ANKRD20A3Q5VUR7 823 aa16.86■□□□□ 0.29
LDB3-208ENST00000623007 ANKRD22Q5VYY1 191 aa16.86■□□□□ 0.29
LDB3-208ENST00000623007 ITPRIPL1Q6GPH6 555 aa16.86■□□□□ 0.29
LDB3-208ENST00000623007 FUT10Q6P4F1 479 aa16.86■□□□□ 0.29
LDB3-208ENST00000623007 SLC39A5Q6ZMH5 540 aa16.86■□□□□ 0.29
LDB3-208ENST00000623007 MICALCLQ6ZW33 695 aa16.86■□□□□ 0.29
LDB3-208ENST00000623007 CYS1Q717R9 158 aa16.86■□□□□ 0.29
LDB3-208ENST00000623007 TAC4Q86UU9 113 aa16.86■□□□□ 0.29
LDB3-208ENST00000623007 EXOC3L1Q86VI1 746 aa16.86■□□□□ 0.29
LDB3-208ENST00000623007 FBXO36Q8NEA4 188 aa16.86■□□□□ 0.29
LDB3-208ENST00000623007 SGSM3Q96HU1 749 aa16.86■□□□□ 0.29
LDB3-208ENST00000623007 SELENOSQ9BQE4 189 aa16.86■□□□□ 0.29
LDB3-208ENST00000623007 IGSF9Q9P2J2 1179 aa16.86■□□□□ 0.29
LDB3-208ENST00000623007 HSFX1Q9UBD0 423 aa16.86■□□□□ 0.29
LDB3-208ENST00000623007 GGA2Q9UJY4 613 aa16.86■□□□□ 0.29
LDB3-208ENST00000623007 SMG5Q9UPR3 1016 aaKnown RBP16.86■□□□□ 0.29
LDB3-208ENST00000623007 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.86■□□□□ 0.29
LDB3-208ENST00000623007 IKBKGQ9Y6K9 419 aa16.86■□□□□ 0.29
LDB3-208ENST00000623007 FAM92AA1XBS5 289 aa16.85■□□□□ 0.29
LDB3-208ENST00000623007 EBAG9O00559 213 aa16.85■□□□□ 0.29
LDB3-208ENST00000623007 PSMD3O43242 534 aa16.85■□□□□ 0.29
LDB3-208ENST00000623007 MFSD11O43934 449 aa16.85■□□□□ 0.29
LDB3-208ENST00000623007 PQBP1O60828 265 aaKnown RBP16.85■□□□□ 0.29
LDB3-208ENST00000623007 EFCAB14O75071 495 aa16.85■□□□□ 0.29
LDB3-208ENST00000623007 APRTP07741 180 aa16.85■□□□□ 0.29
LDB3-208ENST00000623007 KPNA1P52294 538 aaPredicted RBP16.85■□□□□ 0.29
LDB3-208ENST00000623007 PPIDQ08752 370 aaKnown RBP16.85■□□□□ 0.29
LDB3-208ENST00000623007 SKIDA1Q1XH10 827 aa16.85■□□□□ 0.29
LDB3-208ENST00000623007 SCN4BQ8IWT1 228 aa16.85■□□□□ 0.29
LDB3-208ENST00000623007 CCDC13Q8IYE1 715 aa16.85■□□□□ 0.29
LDB3-208ENST00000623007 CRIPAKQ8N1N5 446 aa16.85■□□□□ 0.29
LDB3-208ENST00000623007 PYROXD2Q8N2H3 581 aa16.85■□□□□ 0.29
LDB3-208ENST00000623007 ANKLE1Q8NAG6 615 aa16.85■□□□□ 0.29
LDB3-208ENST00000623007 EDEM1Q92611 657 aa16.85■□□□□ 0.29
LDB3-208ENST00000623007 C1orf74Q96LT6 269 aa16.85■□□□□ 0.29
LDB3-208ENST00000623007 PWWP2AQ96N64 755 aa16.85■□□□□ 0.29
LDB3-208ENST00000623007 TMEM209Q96SK2 561 aa16.85■□□□□ 0.29
LDB3-208ENST00000623007 NSRP1Q9H0G5 558 aaKnown RBP16.85■□□□□ 0.29
LDB3-208ENST00000623007 ETNK1Q9HBU6 452 aa16.85■□□□□ 0.29
LDB3-208ENST00000623007 NKIRAS1Q9NYS0 192 aa16.85■□□□□ 0.29
LDB3-208ENST00000623007 DNAJB4Q9UDY4 337 aa16.85■□□□□ 0.29
LDB3-208ENST00000623007 STK39Q9UEW8 545 aa16.85■□□□□ 0.29
LDB3-208ENST00000623007 TTC3P53804 2025 aa16.85■□□□□ 0.29
LDB3-208ENST00000623007 ERICH4A6NGS2 130 aa16.85■□□□□ 0.29
LDB3-208ENST00000623007 GOLGA8MH3BSY2 632 aa16.85■□□□□ 0.29
LDB3-208ENST00000623007 HOXC13P31276 330 aa16.85■□□□□ 0.29
LDB3-208ENST00000623007 PITX1P78337 314 aaPredicted RBP16.85■□□□□ 0.29
LDB3-208ENST00000623007 IFI35P80217 286 aaPredicted RBP16.85■□□□□ 0.29
LDB3-208ENST00000623007 GALNT2Q10471 571 aa16.85■□□□□ 0.29
LDB3-208ENST00000623007 AP1B1Q10567 949 aa16.85■□□□□ 0.29
LDB3-208ENST00000623007 IKBKEQ14164 716 aa16.85■□□□□ 0.29
LDB3-208ENST00000623007 GPNMBQ14956 572 aa16.85■□□□□ 0.29
LDB3-208ENST00000623007 FNBP1LQ5T0N5 605 aa16.85■□□□□ 0.29
LDB3-208ENST00000623007 CNKSR3Q6P9H4 555 aa16.85■□□□□ 0.29
LDB3-208ENST00000623007 CCNYQ8ND76 341 aa16.85■□□□□ 0.29
LDB3-208ENST00000623007 CCDC110Q8TBZ0 833 aa16.85■□□□□ 0.29
LDB3-208ENST00000623007 XPO6Q96QU8 1125 aaKnown RBP16.85■□□□□ 0.29
LDB3-208ENST00000623007 CRISPLD2Q9H0B8 497 aa16.85■□□□□ 0.29
LDB3-208ENST00000623007 RETREG1Q9H6L5 497 aa16.85■□□□□ 0.29
LDB3-208ENST00000623007 C10orf88Q9H8K7 445 aa16.85■□□□□ 0.29
LDB3-208ENST00000623007 TLR8Q9NR97 1041 aaKnown RBP16.85■□□□□ 0.29
LDB3-208ENST00000623007 TLR6Q9Y2C9 796 aa16.85■□□□□ 0.29
LDB3-208ENST00000623007 PLXNA3P51805 1871 aa16.84■□□□□ 0.29
LDB3-208ENST00000623007 IQANK1A0A1B0GTG1 560 aa16.84■□□□□ 0.29
LDB3-208ENST00000623007 RASA4BC9J798 803 aa16.84■□□□□ 0.29
LDB3-208ENST00000623007 RASA4O43374 803 aa16.84■□□□□ 0.29
LDB3-208ENST00000623007 GALTP07902 379 aa16.84■□□□□ 0.29
LDB3-208ENST00000623007 CHN1P15882 459 aa16.84■□□□□ 0.29
LDB3-208ENST00000623007 EPHB2P29323 1055 aa16.84■□□□□ 0.29
LDB3-208ENST00000623007 MSH2P43246 934 aa16.84■□□□□ 0.29
LDB3-208ENST00000623007 MAGEA3P43357 314 aa16.84■□□□□ 0.29
LDB3-208ENST00000623007 ALDH7A1P49419 539 aaKnown RBP16.84■□□□□ 0.29
LDB3-208ENST00000623007 ARMC3Q5W041 872 aa16.84■□□□□ 0.29
LDB3-208ENST00000623007 NUGGCQ68CJ6 796 aa16.84■□□□□ 0.29
LDB3-208ENST00000623007 ZNF449Q6P9G9 518 aa16.84■□□□□ 0.29
LDB3-208ENST00000623007 ADGRD1Q6QNK2 874 aa16.84■□□□□ 0.29
LDB3-208ENST00000623007 DENND5BQ6ZUT9 1274 aa16.84■□□□□ 0.29
LDB3-208ENST00000623007 ZNF276Q8N554 614 aa16.84■□□□□ 0.29
LDB3-208ENST00000623007 P2RY11Q96G91 374 aa16.84■□□□□ 0.29
LDB3-208ENST00000623007 SMC6Q96SB8 1091 aa16.84■□□□□ 0.29
LDB3-208ENST00000623007 TTPALQ9BTX7 342 aa16.84■□□□□ 0.29
LDB3-208ENST00000623007 RHOBTB2Q9BYZ6 727 aa16.84■□□□□ 0.29
LDB3-208ENST00000623007 PRDM12Q9H4Q4 367 aa16.84■□□□□ 0.29
LDB3-208ENST00000623007 RABGEF1Q9UJ41 708 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms