RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 CLEC1BQ9P126 229 aa18.44■□□□□ 0.54
PTCHD3-202ENST00000622555 OR12D3Q9UGF7 316 aa18.44■□□□□ 0.54
PTCHD3-202ENST00000622555 CLUHO75153 1309 aa18.44■□□□□ 0.54
PTCHD3-202ENST00000622555 FAM72CH0Y354 149 aa18.43■□□□□ 0.54
PTCHD3-202ENST00000622555 H3BRJ5 948 aa18.43■□□□□ 0.54
PTCHD3-202ENST00000622555 RRP9O43818 475 aaKnown RBP18.43■□□□□ 0.54
PTCHD3-202ENST00000622555 GOT1P17174 413 aa18.43■□□□□ 0.54
PTCHD3-202ENST00000622555 AVPR1AP37288 418 aa18.43■□□□□ 0.54
PTCHD3-202ENST00000622555 TAZQ16635 292 aa18.43■□□□□ 0.54
PTCHD3-202ENST00000622555 FAM72AQ5TYM5 149 aa18.43■□□□□ 0.54
PTCHD3-202ENST00000622555 FAM72DQ6L9T8 149 aa18.43■□□□□ 0.54
PTCHD3-202ENST00000622555 FAM72BQ86X60 149 aa18.43■□□□□ 0.54
PTCHD3-202ENST00000622555 VSIG1Q86XK7 387 aa18.43■□□□□ 0.54
PTCHD3-202ENST00000622555 RFX6Q8HWS3 928 aa18.43■□□□□ 0.54
PTCHD3-202ENST00000622555 CMTM8Q8IZV2 173 aa18.43■□□□□ 0.54
PTCHD3-202ENST00000622555 EPAS1Q99814 870 aa18.43■□□□□ 0.54
PTCHD3-202ENST00000622555 CARD6Q9BX69 1037 aa18.43■□□□□ 0.54
PTCHD3-202ENST00000622555 CWC15Q9P013 229 aaKnown RBP18.43■□□□□ 0.54
PTCHD3-202ENST00000622555 CDH22Q9UJ99 828 aa18.43■□□□□ 0.54
PTCHD3-202ENST00000622555 HS3ST4Q9Y661 456 aa18.43■□□□□ 0.54
PTCHD3-202ENST00000622555 TCRBV7S2A1N4TA0A589 114 aa18.43■□□□□ 0.54
PTCHD3-202ENST00000622555 SOBPA7XYQ1 873 aa18.43■□□□□ 0.54
PTCHD3-202ENST00000622555 EEF2KO00418 725 aaKnown RBP18.43■□□□□ 0.54
PTCHD3-202ENST00000622555 TBX10O75333 385 aa18.43■□□□□ 0.54
PTCHD3-202ENST00000622555 FSHRP23945 695 aa18.43■□□□□ 0.54
PTCHD3-202ENST00000622555 IL4RP24394 825 aa18.43■□□□□ 0.54
PTCHD3-202ENST00000622555 CORO1AP31146 461 aaKnown RBP18.43■□□□□ 0.54
PTCHD3-202ENST00000622555 SEMA3BQ13214 749 aa18.43■□□□□ 0.54
PTCHD3-202ENST00000622555 MTA1Q13330 715 aa18.43■□□□□ 0.54
PTCHD3-202ENST00000622555 CTC1Q2NKJ3 1217 aa18.43■□□□□ 0.54
PTCHD3-202ENST00000622555 ANKRD20A8PQ5CZ79 823 aa18.43■□□□□ 0.54
PTCHD3-202ENST00000622555 PIK3R6Q5UE93 754 aa18.43■□□□□ 0.54
PTCHD3-202ENST00000622555 CEP112Q8N8E3 955 aa18.43■□□□□ 0.54
PTCHD3-202ENST00000622555 TTC16Q8NEE8 873 aa18.43■□□□□ 0.54
PTCHD3-202ENST00000622555 CSPG4P5Q96PW8 444 aa18.43■□□□□ 0.54
PTCHD3-202ENST00000622555 SMG9Q9H0W8 520 aaKnown RBP18.43■□□□□ 0.54
PTCHD3-202ENST00000622555 RCOR3Q9P2K3 495 aaPredicted RBP18.43■□□□□ 0.54
PTCHD3-202ENST00000622555 ZMYM5Q9UJ78 669 aa18.43■□□□□ 0.54
PTCHD3-202ENST00000622555 ZNF487B1APH4 448 aa18.42■□□□□ 0.54
PTCHD3-202ENST00000622555 TJP3O95049 919 aa18.42■□□□□ 0.54
PTCHD3-202ENST00000622555 SLC11A2P49281 568 aa18.42■□□□□ 0.54
PTCHD3-202ENST00000622555 TPI1P60174 286 aa18.42■□□□□ 0.54
PTCHD3-202ENST00000622555 DYNLT1P63172 113 aa18.42■□□□□ 0.54
PTCHD3-202ENST00000622555 ITIH3Q06033 890 aa18.42■□□□□ 0.54
PTCHD3-202ENST00000622555 DLX2Q07687 328 aaPredicted RBP18.42■□□□□ 0.54
PTCHD3-202ENST00000622555 MS4A13Q5J8X5 152 aa18.42■□□□□ 0.54
PTCHD3-202ENST00000622555 CES5AQ6NT32 575 aa18.42■□□□□ 0.54
PTCHD3-202ENST00000622555 DENND1CQ8IV53 801 aa18.42■□□□□ 0.54
PTCHD3-202ENST00000622555 MNS1Q8NEH6 495 aa18.42■□□□□ 0.54
PTCHD3-202ENST00000622555 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.42■□□□□ 0.54
PTCHD3-202ENST00000622555 WBP2Q969T9 261 aa18.42■□□□□ 0.54
PTCHD3-202ENST00000622555 FAF2Q96CS3 445 aa18.42■□□□□ 0.54
PTCHD3-202ENST00000622555 RNF157Q96PX1 679 aa18.42■□□□□ 0.54
PTCHD3-202ENST00000622555 AP1M1Q9BXS5 423 aa18.42■□□□□ 0.54
PTCHD3-202ENST00000622555 ADAM7Q9H2U9 754 aa18.42■□□□□ 0.54
PTCHD3-202ENST00000622555 EFR3BQ9Y2G0 817 aa18.42■□□□□ 0.54
PTCHD3-202ENST00000622555 BRWD1Q9NSI6 2320 aa18.42■□□□□ 0.54
PTCHD3-202ENST00000622555 NUP210Q8TEM1 1887 aaPredicted RBP18.42■□□□□ 0.54
PTCHD3-202ENST00000622555 KRIT1O00522 736 aa18.41■□□□□ 0.54
PTCHD3-202ENST00000622555 DAPK3O43293 454 aa18.41■□□□□ 0.54
PTCHD3-202ENST00000622555 LRIG2O94898 1065 aa18.41■□□□□ 0.54
PTCHD3-202ENST00000622555 ZNF135P52742 658 aaPredicted RBP18.41■□□□□ 0.54
PTCHD3-202ENST00000622555 MLLT6P55198 1093 aaPredicted RBP18.41■□□□□ 0.54
PTCHD3-202ENST00000622555 ZXDBP98169 803 aa18.41■□□□□ 0.54
PTCHD3-202ENST00000622555 ADCY2Q08462 1091 aa18.41■□□□□ 0.54
PTCHD3-202ENST00000622555 TFDP2Q14188 446 aa18.41■□□□□ 0.54
PTCHD3-202ENST00000622555 CBX2Q14781 532 aaPredicted RBP18.41■□□□□ 0.54
PTCHD3-202ENST00000622555 RFX8Q6ZV50 586 aa18.41■□□□□ 0.54
PTCHD3-202ENST00000622555 LRRN4CLQ8ND94 238 aa18.41■□□□□ 0.54
PTCHD3-202ENST00000622555 PCDH19Q8TAB3 1148 aa18.41■□□□□ 0.54
PTCHD3-202ENST00000622555 ADAMTS19Q8TE59 1207 aa18.41■□□□□ 0.54
PTCHD3-202ENST00000622555 MAIP1Q8WWC4 291 aa18.41■□□□□ 0.54
PTCHD3-202ENST00000622555 C1orf74Q96LT6 269 aa18.41■□□□□ 0.54
PTCHD3-202ENST00000622555 ZSWIM3Q96MP5 696 aa18.41■□□□□ 0.54
PTCHD3-202ENST00000622555 CFAP97Q9P2B7 532 aa18.41■□□□□ 0.54
PTCHD3-202ENST00000622555 ARHGAP26Q9UNA1 814 aa18.41■□□□□ 0.54
PTCHD3-202ENST00000622555 CTAGE15A4D2H0 777 aa18.4■□□□□ 0.54
PTCHD3-202ENST00000622555 ACSL4O60488 711 aa18.4■□□□□ 0.54
PTCHD3-202ENST00000622555 CST8O60676 142 aa18.4■□□□□ 0.54
PTCHD3-202ENST00000622555 KLKB1P03952 638 aa18.4■□□□□ 0.54
PTCHD3-202ENST00000622555 CTAGE8P0CG41 777 aa18.4■□□□□ 0.54
PTCHD3-202ENST00000622555 KLF1Q13351 362 aaPredicted RBP18.4■□□□□ 0.54
PTCHD3-202ENST00000622555 ATAT1Q5SQI0 421 aa18.4■□□□□ 0.54
PTCHD3-202ENST00000622555 RAP1GAP2Q684P5 730 aa18.4■□□□□ 0.54
PTCHD3-202ENST00000622555 NADSYN1Q6IA69 706 aa18.4■□□□□ 0.54
PTCHD3-202ENST00000622555 BBS12Q6ZW61 710 aa18.4■□□□□ 0.54
PTCHD3-202ENST00000622555 CTAGE6Q86UF2 777 aa18.4■□□□□ 0.54
PTCHD3-202ENST00000622555 CHSY1Q86X52 802 aa18.4■□□□□ 0.54
PTCHD3-202ENST00000622555 CTAGE4Q8IX94 777 aa18.4■□□□□ 0.54
PTCHD3-202ENST00000622555 PABPC5Q96DU9 382 aaKnown RBP18.4■□□□□ 0.54
PTCHD3-202ENST00000622555 DCLK3Q9C098 648 aa18.4■□□□□ 0.54
PTCHD3-202ENST00000622555 S1PR5Q9H228 398 aa18.4■□□□□ 0.54
PTCHD3-202ENST00000622555 LSM7Q9UK45 103 aaKnown RBP18.4■□□□□ 0.54
PTCHD3-202ENST00000622555 SH3BP1Q9Y3L3 701 aa18.4■□□□□ 0.54
PTCHD3-202ENST00000622555 DOCK4Q8N1I0 1966 aa18.4■□□□□ 0.54
PTCHD3-202ENST00000622555 GOLGA6L10A0A0M3HER8 536 aa18.4■□□□□ 0.54
PTCHD3-202ENST00000622555 GOLGA6L7A0A1B0GV03 622 aa18.4■□□□□ 0.54
PTCHD3-202ENST00000622555 E9PAM4 449 aa18.4■□□□□ 0.54
PTCHD3-202ENST00000622555 LEFTY2O00292 366 aa18.4■□□□□ 0.54
PTCHD3-202ENST00000622555 APOL1O14791 398 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms