RNA–Protein interactions for RNA: ENST00000622259.4

SNX12-206, Transcript of sorting nexin 12, humanhuman

TSL 5 BASIC

Gene SNX12, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-206ENST00000622259 ZC3H3Q8IXZ2 948 aaKnown RBP15.25■□□□□ 0.03
SNX12-206ENST00000622259 MED10Q9BTT4 135 aa15.25■□□□□ 0.03
SNX12-206ENST00000622259 OSBPL2Q9H1P3 480 aa15.25■□□□□ 0.03
SNX12-206ENST00000622259 NEUROG2Q9H2A3 272 aa15.25■□□□□ 0.03
SNX12-206ENST00000622259 ERVMER34-1Q9H9K5 563 aa15.25■□□□□ 0.03
SNX12-206ENST00000622259 COMMD8Q9NX08 183 aa15.25■□□□□ 0.03
SNX12-206ENST00000622259 SEPT3Q9UH03 358 aa15.25■□□□□ 0.03
SNX12-206ENST00000622259 R3HCC1Q9Y3T6 440 aaKnown RBP15.25■□□□□ 0.03
SNX12-206ENST00000622259 ENO4A6NNW6 628 aa15.24■□□□□ 0.03
SNX12-206ENST00000622259 AP1G2O75843 785 aa15.24■□□□□ 0.03
SNX12-206ENST00000622259 LDHAP00338 332 aaKnown RBP15.24■□□□□ 0.03
SNX12-206ENST00000622259 RARGP13631 454 aa15.24■□□□□ 0.03
SNX12-206ENST00000622259 PLA2G4AP47712 749 aa15.24■□□□□ 0.03
SNX12-206ENST00000622259 ZNF211Q13398 564 aaPredicted RBP15.24■□□□□ 0.03
SNX12-206ENST00000622259 TTC31Q49AM3 519 aaPredicted RBP15.24■□□□□ 0.03
SNX12-206ENST00000622259 ZNF776Q68DI1 518 aaPredicted RBP15.24■□□□□ 0.03
SNX12-206ENST00000622259 HSCBQ8IWL3 235 aa15.24■□□□□ 0.03
SNX12-206ENST00000622259 FUKQ8N0W3 1084 aa15.24■□□□□ 0.03
SNX12-206ENST00000622259 SERAC1Q96JX3 654 aa15.24■□□□□ 0.03
SNX12-206ENST00000622259 PABPC3Q9H361 631 aaKnown RBP15.24■□□□□ 0.03
SNX12-206ENST00000622259 KRT82Q9NSB4 513 aa15.24■□□□□ 0.03
SNX12-206ENST00000622259 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.24■□□□□ 0.03
SNX12-206ENST00000622259 FBXL12Q9NXK8 326 aa15.24■□□□□ 0.03
SNX12-206ENST00000622259 AGO1Q9UL18 857 aaKnown RBP15.24■□□□□ 0.03
SNX12-206ENST00000622259 SRPK3Q9UPE1 567 aa15.24■□□□□ 0.03
SNX12-206ENST00000622259 CSMD1Q96PZ7 3565 aa15.24■□□□□ 0.03
SNX12-206ENST00000622259 A0A1W2PP55 124 aa15.23■□□□□ 0.03
SNX12-206ENST00000622259 A0A1W2PQH9 124 aa15.23■□□□□ 0.03
SNX12-206ENST00000622259 BLACEA4D250 179 aa15.23■□□□□ 0.03
SNX12-206ENST00000622259 CDRT15L2A8MXV6 281 aa15.23■□□□□ 0.03
SNX12-206ENST00000622259 TIMM44O43615 452 aa15.23■□□□□ 0.03
SNX12-206ENST00000622259 TNNC2P02585 160 aa15.23■□□□□ 0.03
SNX12-206ENST00000622259 GIMD1P0DJR0 217 aa15.23■□□□□ 0.03
SNX12-206ENST00000622259 GARTP22102 1010 aa15.23■□□□□ 0.03
SNX12-206ENST00000622259 RBMS1P29558 406 aaKnown RBP15.23■□□□□ 0.03
SNX12-206ENST00000622259 HLA-FP30511 346 aa15.23■□□□□ 0.03
SNX12-206ENST00000622259 CASP5P51878 434 aa15.23■□□□□ 0.03
SNX12-206ENST00000622259 EHHADHQ08426 723 aa15.23■□□□□ 0.03
SNX12-206ENST00000622259 IGFBP7Q16270 282 aa15.23■□□□□ 0.03
SNX12-206ENST00000622259 L1TD1Q5T7N2 865 aaKnown RBP15.23■□□□□ 0.03
SNX12-206ENST00000622259 TRAPPC11Q7Z392 1133 aa15.23■□□□□ 0.03
SNX12-206ENST00000622259 CCDC83Q8IWF9 413 aa15.23■□□□□ 0.03
SNX12-206ENST00000622259 OXR1Q8N573 874 aa15.23■□□□□ 0.03
SNX12-206ENST00000622259 GANCQ8TET4 914 aa15.23■□□□□ 0.03
SNX12-206ENST00000622259 RAD54LQ92698 747 aa15.23■□□□□ 0.03
SNX12-206ENST00000622259 SNX21Q969T3 373 aa15.23■□□□□ 0.03
SNX12-206ENST00000622259 HVCN1Q96D96 273 aa15.23■□□□□ 0.03
SNX12-206ENST00000622259 CCNL2Q96S94 520 aaPredicted RBP15.23■□□□□ 0.03
SNX12-206ENST00000622259 ARHGAP9Q9BRR9 750 aa15.23■□□□□ 0.03
SNX12-206ENST00000622259 UCKL1Q9NWZ5 548 aa15.23■□□□□ 0.03
SNX12-206ENST00000622259 TBC1D7Q9P0N9 293 aa15.23■□□□□ 0.03
SNX12-206ENST00000622259 DOCK9Q9BZ29 2069 aa15.23■□□□□ 0.03
SNX12-206ENST00000622259 CACNA1DQ01668 2161 aa15.22■□□□□ 0.03
SNX12-206ENST00000622259 LY6G6EA0A0G2JKS1 128 aa15.22■□□□□ 0.03
SNX12-206ENST00000622259 MID1O15344 667 aa15.22■□□□□ 0.03
SNX12-206ENST00000622259 HMBSP08397 361 aa15.22■□□□□ 0.03
SNX12-206ENST00000622259 CORO1AP31146 461 aaKnown RBP15.22■□□□□ 0.03
SNX12-206ENST00000622259 CHKAP35790 457 aa15.22■□□□□ 0.03
SNX12-206ENST00000622259 MAP3K7CLP57077 242 aa15.22■□□□□ 0.03
SNX12-206ENST00000622259 E2F5Q15329 346 aa15.22■□□□□ 0.03
SNX12-206ENST00000622259 DUOXA2Q1HG44 320 aa15.22■□□□□ 0.03
SNX12-206ENST00000622259 ISXQ2M1V0 245 aa15.22■□□□□ 0.03
SNX12-206ENST00000622259 WDR72Q3MJ13 1102 aa15.22■□□□□ 0.03
SNX12-206ENST00000622259 C10orf120Q5SQS8 335 aa15.22■□□□□ 0.03
SNX12-206ENST00000622259 KLHDC10Q6PID8 442 aa15.22■□□□□ 0.03
SNX12-206ENST00000622259 USP30Q70CQ3 517 aa15.22■□□□□ 0.03
SNX12-206ENST00000622259 ADIPOR2Q86V24 386 aa15.22■□□□□ 0.03
SNX12-206ENST00000622259 SMARCD1Q96GM5 515 aa15.22■□□□□ 0.03
SNX12-206ENST00000622259 ATXN7L3BQ96GX2 97 aa15.22■□□□□ 0.03
SNX12-206ENST00000622259 FGFBP2Q9BYJ0 223 aa15.22■□□□□ 0.03
SNX12-206ENST00000622259 RSPH9Q9H1X1 276 aaPredicted RBP15.22■□□□□ 0.03
SNX12-206ENST00000622259 FBRSQ9HAH7 460 aa15.22■□□□□ 0.03
SNX12-206ENST00000622259 SCML2Q9UQR0 700 aa15.22■□□□□ 0.03
SNX12-206ENST00000622259 NCKAP1Q9Y2A7 1128 aa15.22■□□□□ 0.03
SNX12-206ENST00000622259 U3KQA8 63 aa15.22■□□□□ 0.03
SNX12-206ENST00000622259 TDRD6O60522 2096 aaKnown RBP15.21■□□□□ 0.03
SNX12-206ENST00000622259 ATP8B3O60423 1300 aa15.21■□□□□ 0.03
SNX12-206ENST00000622259 PRPF6O94906 941 aaKnown RBP15.21■□□□□ 0.03
SNX12-206ENST00000622259 FAM163BP0C2L3 166 aa15.21■□□□□ 0.03
SNX12-206ENST00000622259 CKMT1AP12532 417 aa15.21■□□□□ 0.03
SNX12-206ENST00000622259 CCDC130P13994 396 aa15.21■□□□□ 0.03
SNX12-206ENST00000622259 HOXD9P28356 352 aaPredicted RBP15.21■□□□□ 0.03
SNX12-206ENST00000622259 CCR5P51681 352 aa15.21■□□□□ 0.03
SNX12-206ENST00000622259 PPP2CBP62714 309 aa15.21■□□□□ 0.03
SNX12-206ENST00000622259 PPP2CAP67775 309 aa15.21■□□□□ 0.03
SNX12-206ENST00000622259 ASIC1P78348 528 aa15.21■□□□□ 0.03
SNX12-206ENST00000622259 SGO2Q562F6 1265 aa15.21■□□□□ 0.03
SNX12-206ENST00000622259 XKR5Q6UX68 686 aa15.21■□□□□ 0.03
SNX12-206ENST00000622259 CHST9Q7L1S5 443 aa15.21■□□□□ 0.03
SNX12-206ENST00000622259 SCD5Q86SK9 330 aa15.21■□□□□ 0.03
SNX12-206ENST00000622259 CBWD2Q8IUF1 395 aa15.21■□□□□ 0.03
SNX12-206ENST00000622259 OR2T34Q8NGX1 318 aa15.21■□□□□ 0.03
SNX12-206ENST00000622259 OR4C6Q8NH72 309 aa15.21■□□□□ 0.03
SNX12-206ENST00000622259 DDI1Q8WTU0 396 aa15.21■□□□□ 0.03
SNX12-206ENST00000622259 CCDC97Q96F63 343 aaPredicted RBP15.21■□□□□ 0.03
SNX12-206ENST00000622259 ACCSQ96QU6 501 aa15.21■□□□□ 0.03
SNX12-206ENST00000622259 SEMA3CQ99985 751 aa15.21■□□□□ 0.03
SNX12-206ENST00000622259 SLC2A11Q9BYW1 496 aa15.21■□□□□ 0.03
SNX12-206ENST00000622259 EPN3Q9H201 632 aa15.21■□□□□ 0.03
SNX12-206ENST00000622259 FBXO44Q9H4M3 255 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms