RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 CCR10P46092 362 aa16.23■□□□□ 0.19
NPHP4-211ENST00000622020 CDK7P50613 346 aa16.23■□□□□ 0.19
NPHP4-211ENST00000622020 HDAC4P56524 1084 aa16.23■□□□□ 0.19
NPHP4-211ENST00000622020 GSTA3Q16772 222 aa16.23■□□□□ 0.19
NPHP4-211ENST00000622020 Q3C1V9 767 aa16.23■□□□□ 0.19
NPHP4-211ENST00000622020 PDSS2Q86YH6 399 aa16.23■□□□□ 0.19
NPHP4-211ENST00000622020 TP53INP2Q8IXH6 220 aa16.23■□□□□ 0.19
NPHP4-211ENST00000622020 PPP1R13LQ8WUF5 828 aa16.23■□□□□ 0.19
NPHP4-211ENST00000622020 ZBED3Q96IU2 234 aaPredicted RBP16.23■□□□□ 0.19
NPHP4-211ENST00000622020 UNKQ9C0B0 810 aaKnown RBP16.23■□□□□ 0.19
NPHP4-211ENST00000622020 TXNDC16Q9P2K2 825 aa16.23■□□□□ 0.19
NPHP4-211ENST00000622020 TRIP11Q15643 1979 aa16.23■□□□□ 0.19
NPHP4-211ENST00000622020 ACKR2O00590 384 aa16.23■□□□□ 0.19
NPHP4-211ENST00000622020 PFKMP08237 780 aa16.23■□□□□ 0.19
NPHP4-211ENST00000622020 GOT1P17174 413 aa16.23■□□□□ 0.19
NPHP4-211ENST00000622020 AOC1P19801 751 aa16.23■□□□□ 0.19
NPHP4-211ENST00000622020 STILQ15468 1287 aa16.23■□□□□ 0.19
NPHP4-211ENST00000622020 SURF1Q15526 300 aa16.23■□□□□ 0.19
NPHP4-211ENST00000622020 PAOXQ6QHF9 649 aa16.23■□□□□ 0.19
NPHP4-211ENST00000622020 PACS1Q6VY07 963 aa16.23■□□□□ 0.19
NPHP4-211ENST00000622020 ST13P4Q8IZP2 240 aaPredicted RBP16.23■□□□□ 0.19
NPHP4-211ENST00000622020 TFB1MQ8WVM0 346 aaKnown RBP16.23■□□□□ 0.19
NPHP4-211ENST00000622020 CNKSR2Q8WXI2 1034 aa16.23■□□□□ 0.19
NPHP4-211ENST00000622020 DNAJC1Q96KC8 554 aaKnown RBP16.23■□□□□ 0.19
NPHP4-211ENST00000622020 KLHL4Q9C0H6 718 aa16.23■□□□□ 0.19
NPHP4-211ENST00000622020 PLIN3O60664 434 aa16.22■□□□□ 0.19
NPHP4-211ENST00000622020 IL1BP01584 269 aa16.22■□□□□ 0.19
NPHP4-211ENST00000622020 VDRP11473 427 aa16.22■□□□□ 0.19
NPHP4-211ENST00000622020 ATP6V1B1P15313 513 aa16.22■□□□□ 0.19
NPHP4-211ENST00000622020 BOLA3Q53S33 107 aa16.22■□□□□ 0.19
NPHP4-211ENST00000622020 PPM1LQ5SGD2 360 aa16.22■□□□□ 0.19
NPHP4-211ENST00000622020 GJC2Q5T442 439 aaPredicted RBP16.22■□□□□ 0.19
NPHP4-211ENST00000622020 TMCO4Q5TGY1 634 aa16.22■□□□□ 0.19
NPHP4-211ENST00000622020 FBXL19Q6PCT2 694 aa16.22■□□□□ 0.19
NPHP4-211ENST00000622020 CATSPERGQ6ZRH7 1159 aa16.22■□□□□ 0.19
NPHP4-211ENST00000622020 FAM131BQ86XD5 332 aa16.22■□□□□ 0.19
NPHP4-211ENST00000622020 SPNS2Q8IVW8 549 aa16.22■□□□□ 0.19
NPHP4-211ENST00000622020 PLD6Q8N2A8 252 aaKnown RBP16.22■□□□□ 0.19
NPHP4-211ENST00000622020 ZNF781Q8N8C0 355 aa16.22■□□□□ 0.19
NPHP4-211ENST00000622020 SORT1Q99523 831 aa16.22■□□□□ 0.19
NPHP4-211ENST00000622020 WDR55Q9H6Y2 383 aaPredicted RBP16.22■□□□□ 0.19
NPHP4-211ENST00000622020 SNX9Q9Y5X1 595 aa16.22■□□□□ 0.19
NPHP4-211ENST00000622020 COL11A1P12107 1806 aaPredicted RBP16.22■□□□□ 0.19
NPHP4-211ENST00000622020 hCG_2014768A0A024R1R8 64 aa16.22■□□□□ 0.19
NPHP4-211ENST00000622020 ZBTB42B2RXF5 422 aa16.22■□□□□ 0.19
NPHP4-211ENST00000622020 ZBTB14O43829 449 aa16.22■□□□□ 0.19
NPHP4-211ENST00000622020 FKBP6O75344 327 aa16.22■□□□□ 0.19
NPHP4-211ENST00000622020 AMHP03971 560 aa16.22■□□□□ 0.19
NPHP4-211ENST00000622020 PDGFRBP09619 1106 aa16.22■□□□□ 0.19
NPHP4-211ENST00000622020 RALBP11234 206 aa16.22■□□□□ 0.19
NPHP4-211ENST00000622020 TCN1P20061 433 aaPredicted RBP16.22■□□□□ 0.19
NPHP4-211ENST00000622020 ITGAXP20702 1163 aa16.22■□□□□ 0.19
NPHP4-211ENST00000622020 MXD4Q14582 209 aaPredicted RBP16.22■□□□□ 0.19
NPHP4-211ENST00000622020 FAM91A1Q658Y4 838 aa16.22■□□□□ 0.19
NPHP4-211ENST00000622020 MARK2Q7KZI7 788 aaKnown RBP16.22■□□□□ 0.19
NPHP4-211ENST00000622020 TTC30AQ86WT1 665 aa16.22■□□□□ 0.19
NPHP4-211ENST00000622020 CCDC185Q8N715 623 aa16.22■□□□□ 0.19
NPHP4-211ENST00000622020 MTMR14Q8NCE2 650 aa16.22■□□□□ 0.19
NPHP4-211ENST00000622020 MARK4Q96L34 752 aa16.22■□□□□ 0.19
NPHP4-211ENST00000622020 CENPKQ9BS16 269 aa16.22■□□□□ 0.19
NPHP4-211ENST00000622020 A0A087WZ62 844 aa16.21■□□□□ 0.19
NPHP4-211ENST00000622020 IGKV6D-21A0A0A0MT36 114 aa16.21■□□□□ 0.19
NPHP4-211ENST00000622020 SOWAHBA6NEL2 793 aa16.21■□□□□ 0.19
NPHP4-211ENST00000622020 PPEF2O14830 753 aa16.21■□□□□ 0.19
NPHP4-211ENST00000622020 VTNP04004 478 aa16.21■□□□□ 0.19
NPHP4-211ENST00000622020 ITGA2BP08514 1039 aa16.21■□□□□ 0.19
NPHP4-211ENST00000622020 ADORA2BP29275 332 aa16.21■□□□□ 0.19
NPHP4-211ENST00000622020 GABRB2P47870 512 aa16.21■□□□□ 0.19
NPHP4-211ENST00000622020 GK3PQ14409 553 aa16.21■□□□□ 0.19
NPHP4-211ENST00000622020 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.21■□□□□ 0.19
NPHP4-211ENST00000622020 SLC9B1Q4ZJI4 515 aa16.21■□□□□ 0.19
NPHP4-211ENST00000622020 TSHZ1Q6ZSZ6 1077 aa16.21■□□□□ 0.19
NPHP4-211ENST00000622020 NME8Q8N427 588 aa16.21■□□□□ 0.19
NPHP4-211ENST00000622020 COLGALT1Q8NBJ5 622 aa16.21■□□□□ 0.19
NPHP4-211ENST00000622020 USP13Q92995 863 aaPredicted RBP16.21■□□□□ 0.19
NPHP4-211ENST00000622020 ATP2A3Q93084 1043 aa16.21■□□□□ 0.19
NPHP4-211ENST00000622020 NDNQ99608 321 aa16.21■□□□□ 0.19
NPHP4-211ENST00000622020 FDXACB1Q9BRP7 624 aaPredicted RBP16.21■□□□□ 0.19
NPHP4-211ENST00000622020 COG4Q9H9E3 785 aa16.21■□□□□ 0.19
NPHP4-211ENST00000622020 PTPRHQ9HD43 1115 aa16.21■□□□□ 0.19
NPHP4-211ENST00000622020 INPP5FQ9Y2H2 1132 aa16.21■□□□□ 0.19
NPHP4-211ENST00000622020 BCLAF3A2AJT9 711 aaKnown RBP16.21■□□□□ 0.19
NPHP4-211ENST00000622020 PAPSS1O43252 624 aaPredicted RBP16.21■□□□□ 0.19
NPHP4-211ENST00000622020 VAV1P15498 845 aa16.21■□□□□ 0.19
NPHP4-211ENST00000622020 TREML2Q5T2D2 321 aa16.21■□□□□ 0.19
NPHP4-211ENST00000622020 MAPK15Q8TD08 544 aa16.21■□□□□ 0.19
NPHP4-211ENST00000622020 MRPL45Q9BRJ2 306 aaKnown RBP16.21■□□□□ 0.19
NPHP4-211ENST00000622020 AS3MTQ9HBK9 375 aa16.21■□□□□ 0.19
NPHP4-211ENST00000622020 HES2Q9Y543 173 aa16.21■□□□□ 0.19
NPHP4-211ENST00000622020 KCNK1O00180 336 aa16.21■□□□□ 0.18
NPHP4-211ENST00000622020 BIRC5O15392 142 aa16.21■□□□□ 0.18
NPHP4-211ENST00000622020 GABBR2O75899 941 aa16.21■□□□□ 0.18
NPHP4-211ENST00000622020 TGM2P21980 687 aa16.21■□□□□ 0.18
NPHP4-211ENST00000622020 RANBP1P43487 201 aa16.21■□□□□ 0.18
NPHP4-211ENST00000622020 PKNOX1P55347 436 aa16.21■□□□□ 0.18
NPHP4-211ENST00000622020 IRF9Q00978 393 aa16.21■□□□□ 0.18
NPHP4-211ENST00000622020 GRM1Q13255 1194 aa16.21■□□□□ 0.18
NPHP4-211ENST00000622020 PDK2Q15119 407 aa16.21■□□□□ 0.18
NPHP4-211ENST00000622020 PDK3Q15120 406 aa16.21■□□□□ 0.18
NPHP4-211ENST00000622020 SLC10A6Q3KNW5 377 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms