RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 BMPR2Q13873 1038 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 PDK1Q15118 436 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 DCAF6Q58WW2 860 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 WASHC2DQ5SRD0 308 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 ATG16L1Q676U5 607 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 ENDOVQ8N8Q3 282 aaKnown RBP9.72□□□□□ -0.85
PDPN-212ENST00000621990 COLGALT1Q8NBJ5 622 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 CFAP61Q8NHU2 1237 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 ARNTL2Q8WYA1 636 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 NTAN1Q96AB6 310 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 P2RY11Q96G91 374 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 MIPEPQ99797 713 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 NAT9Q9BTE0 207 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 IGSF9Q9P2J2 1179 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 Q9Y3F1 56 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 RAD54BQ9Y620 910 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 E7ENQ6 273 aa9.71□□□□□ -0.85
PDPN-212ENST00000621990 DCLK1O15075 740 aa9.71□□□□□ -0.85
PDPN-212ENST00000621990 CCDC22O60826 627 aa9.71□□□□□ -0.85
PDPN-212ENST00000621990 STK10O94804 968 aaKnown RBP9.71□□□□□ -0.85
PDPN-212ENST00000621990 GSRP00390 522 aa9.71□□□□□ -0.85
PDPN-212ENST00000621990 BPGMP07738 259 aa9.71□□□□□ -0.85
PDPN-212ENST00000621990 PGAM1P18669 254 aa9.71□□□□□ -0.85
PDPN-212ENST00000621990 EPHB2P29323 1055 aa9.71□□□□□ -0.85
PDPN-212ENST00000621990 SERPINB3P29508 390 aa9.71□□□□□ -0.85
PDPN-212ENST00000621990 PITX1P78337 314 aaPredicted RBP9.71□□□□□ -0.85
PDPN-212ENST00000621990 BST1Q10588 318 aa9.71□□□□□ -0.85
PDPN-212ENST00000621990 MAP2K5Q13163 448 aa9.71□□□□□ -0.85
PDPN-212ENST00000621990 HSF5Q4G112 596 aaPredicted RBP9.71□□□□□ -0.85
PDPN-212ENST00000621990 PRAMEF19Q5SWL8 479 aa9.71□□□□□ -0.85
PDPN-212ENST00000621990 KYAT3Q6YP21 454 aaKnown RBP9.71□□□□□ -0.85
PDPN-212ENST00000621990 LONP2Q86WA8 852 aa9.71□□□□□ -0.85
PDPN-212ENST00000621990 PPP1R13LQ8WUF5 828 aa9.71□□□□□ -0.85
PDPN-212ENST00000621990 DEPDC1BQ8WUY9 529 aa9.71□□□□□ -0.85
PDPN-212ENST00000621990 WNT8BQ93098 351 aa9.71□□□□□ -0.85
PDPN-212ENST00000621990 PGAP3Q96FM1 320 aaPredicted RBP9.71□□□□□ -0.85
PDPN-212ENST00000621990 ANKRD27Q96NW4 1050 aa9.71□□□□□ -0.85
PDPN-212ENST00000621990 RNPEPL1Q9HAU8 725 aa9.71□□□□□ -0.85
PDPN-212ENST00000621990 PIGVQ9NUD9 493 aa9.71□□□□□ -0.85
PDPN-212ENST00000621990 FLRT1Q9NZU1 646 aa9.71□□□□□ -0.85
PDPN-212ENST00000621990 STAP1Q9ULZ2 295 aa9.71□□□□□ -0.85
PDPN-212ENST00000621990 DOCK3Q8IZD9 2030 aa9.71□□□□□ -0.86
PDPN-212ENST00000621990 WDR27A2RRH5 827 aa9.71□□□□□ -0.86
PDPN-212ENST00000621990 PPP1R12AO14974 1030 aaPredicted RBP9.71□□□□□ -0.86
PDPN-212ENST00000621990 PEX11AO75192 247 aa9.71□□□□□ -0.86
PDPN-212ENST00000621990 FBXO21O94952 628 aa9.71□□□□□ -0.86
PDPN-212ENST00000621990 FYNP06241 537 aa9.71□□□□□ -0.86
PDPN-212ENST00000621990 ATP5BP06576 529 aaKnown RBP9.71□□□□□ -0.86
PDPN-212ENST00000621990 GM2AP17900 193 aa9.71□□□□□ -0.86
PDPN-212ENST00000621990 HCAR3P49019 387 aa9.71□□□□□ -0.86
PDPN-212ENST00000621990 FRG1Q14331 258 aaKnown RBP9.71□□□□□ -0.86
PDPN-212ENST00000621990 MROH9Q5TGP6 573 aa9.71□□□□□ -0.86
PDPN-212ENST00000621990 KIAA0319Q5VV43 1072 aa9.71□□□□□ -0.86
PDPN-212ENST00000621990 RFX8Q6ZV50 586 aa9.71□□□□□ -0.86
PDPN-212ENST00000621990 NDUFAF2Q8N183 169 aa9.71□□□□□ -0.86
PDPN-212ENST00000621990 CCDC33Q8N5R6 958 aa9.71□□□□□ -0.86
PDPN-212ENST00000621990 ARMC2Q8NEN0 867 aa9.71□□□□□ -0.86
PDPN-212ENST00000621990 NDRG1Q92597 394 aaKnown RBP9.71□□□□□ -0.86
PDPN-212ENST00000621990 E2F7Q96AV8 911 aa9.71□□□□□ -0.86
PDPN-212ENST00000621990 BTBD10Q9BSF8 475 aa9.71□□□□□ -0.86
PDPN-212ENST00000621990 MECRQ9BV79 373 aa9.71□□□□□ -0.86
PDPN-212ENST00000621990 ZNF408Q9H9D4 720 aa9.71□□□□□ -0.86
PDPN-212ENST00000621990 ARL8BQ9NVJ2 186 aa9.71□□□□□ -0.86
PDPN-212ENST00000621990 TRPM7Q96QT4 1865 aa9.71□□□□□ -0.86
PDPN-212ENST00000621990 CAPN14A8MX76 684 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 I3L4J1 428 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 CLDN5O00501 218 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 CYB561D2O14569 222 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 ALDOAP04075 364 aaKnown RBP9.7□□□□□ -0.86
PDPN-212ENST00000621990 MYL2P10916 166 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 GNAZP19086 355 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 CALB2P22676 271 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 CRYMQ14894 314 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 RAB41Q5JT25 222 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 SYPL2Q5VXT5 272 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 WSCD1Q658N2 575 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 PDCD7Q8N8D1 485 aaKnown RBP9.7□□□□□ -0.86
PDPN-212ENST00000621990 RNF169Q8NCN4 708 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 STKLD1Q8NE28 680 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 FAM149B1Q96BN6 582 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 LENG1Q96BZ8 264 aaPredicted RBP9.7□□□□□ -0.86
PDPN-212ENST00000621990 NSL1Q96IY1 281 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 FERMT1Q9BQL6 677 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 KATNAL1Q9BW62 490 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 SLC13A1Q9BZW2 595 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 WDR6Q9NNW5 1121 aaKnown RBP9.7□□□□□ -0.86
PDPN-212ENST00000621990 FBXO6Q9NRD1 293 aaPredicted RBP9.7□□□□□ -0.86
PDPN-212ENST00000621990 PCMTD2Q9NV79 361 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 NR2E3Q9Y5X4 410 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 FAM237BA0A1B0GVD1 139 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 C17orf102A2RUQ5 167 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 M0QYT0 321 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 ADRA1BP35368 520 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 NDUFV1P49821 464 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 PACS1Q6VY07 963 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 ZNF567Q8N184 647 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 SIX6OS1Q8N1H7 587 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 TMEM86AQ8N2M4 240 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 GSTCDQ8NEC7 633 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 NSMCE1Q8WV22 266 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms