RNA–Protein interactions for RNA: ENST00000621747.5

VEGFA-229, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-229ENST00000621747 DDX51Q8N8A6 666 aaKnown RBP eCLIP26.19■■□□□ 1.787e-8■■□□□ 11.5
VEGFA-229ENST00000621747 HJURPQ8NCD3 748 aaPredicted RBP26.19■■□□□ 1.78
VEGFA-229ENST00000621747 ADAM32Q8TC27 787 aa26.19■■□□□ 1.78
VEGFA-229ENST00000621747 SLC39A13Q96H72 371 aa26.19■■□□□ 1.78
VEGFA-229ENST00000621747 PPP1R13BQ96KQ4 1090 aa26.19■■□□□ 1.78
VEGFA-229ENST00000621747 LHX5Q9H2C1 402 aa26.19■■□□□ 1.78
VEGFA-229ENST00000621747 ABCB8Q9NUT2 735 aa26.19■■□□□ 1.78
VEGFA-229ENST00000621747 GGA2Q9UJY4 613 aa26.19■■□□□ 1.78
VEGFA-229ENST00000621747 SDK1Q7Z5N4 2213 aa26.19■■□□□ 1.78
VEGFA-229ENST00000621747 IGHV1OR15-9A0A0B4J2B8 117 aa26.18■■□□□ 1.78
VEGFA-229ENST00000621747 FOXN3O00409 490 aaPredicted RBP26.18■■□□□ 1.78
VEGFA-229ENST00000621747 APOEP02649 317 aa26.18■■□□□ 1.78
VEGFA-229ENST00000621747 EEF1GP26641 437 aaKnown RBP26.18■■□□□ 1.78
VEGFA-229ENST00000621747 SLC6A4P31645 630 aa26.18■■□□□ 1.78
VEGFA-229ENST00000621747 KRT9P35527 623 aa26.18■■□□□ 1.78
VEGFA-229ENST00000621747 PTGER3P43115 390 aa26.18■■□□□ 1.78
VEGFA-229ENST00000621747 SNX16P57768 344 aa26.18■■□□□ 1.78
VEGFA-229ENST00000621747 BPIFB4P59827 614 aa26.18■■□□□ 1.78
VEGFA-229ENST00000621747 SERPINA13PQ6UXR4 307 aa26.18■■□□□ 1.78
VEGFA-229ENST00000621747 CHST9Q7L1S5 443 aa26.18■■□□□ 1.78
VEGFA-229ENST00000621747 SYT12Q8IV01 421 aa26.18■■□□□ 1.78
VEGFA-229ENST00000621747 SORCS1Q8WY21 1168 aa26.18■■□□□ 1.78
VEGFA-229ENST00000621747 SLC6A17Q9H1V8 727 aa26.18■■□□□ 1.78
VEGFA-229ENST00000621747 PRDM16Q9HAZ2 1276 aa26.18■■□□□ 1.78
VEGFA-229ENST00000621747 SAMSN1Q9NSI8 373 aaKnown RBP26.18■■□□□ 1.78
VEGFA-229ENST00000621747 CEP83Q9Y592 693 aa26.18■■□□□ 1.78
VEGFA-229ENST00000621747 ABCA7Q8IZY2 2146 aa26.17■■□□□ 1.78
VEGFA-229ENST00000621747 GOLGA6L22H0YM25 854 aa26.17■■□□□ 1.78
VEGFA-229ENST00000621747 GLI1P08151 1106 aa26.17■■□□□ 1.78
VEGFA-229ENST00000621747 PABPC1P11940 636 aaKnown RBP26.17■■□□□ 1.78
VEGFA-229ENST00000621747 TCP11X2Q5H9J9 407 aa26.17■■□□□ 1.78
VEGFA-229ENST00000621747 NADSYN1Q6IA69 706 aa26.17■■□□□ 1.78
VEGFA-229ENST00000621747 KIAA0907Q7Z7F0 614 aaPredicted RBP26.17■■□□□ 1.78
VEGFA-229ENST00000621747 MFN1Q8IWA4 741 aa26.17■■□□□ 1.78
VEGFA-229ENST00000621747 WDTC1Q8N5D0 677 aa26.17■■□□□ 1.78
VEGFA-229ENST00000621747 CPXM1Q96SM3 734 aa26.17■■□□□ 1.78
VEGFA-229ENST00000621747 EVLQ9UI08 416 aaPredicted RBP26.17■■□□□ 1.78
VEGFA-229ENST00000621747 PLA2G4CQ9UP65 541 aa26.17■■□□□ 1.78
VEGFA-229ENST00000621747 NFE2L3Q9Y4A8 694 aa26.17■■□□□ 1.78
VEGFA-229ENST00000621747 LNP1A1A4G5 178 aa26.16■■□□□ 1.78
VEGFA-229ENST00000621747 TRUB2O95900 331 aaKnown RBP26.16■■□□□ 1.78
VEGFA-229ENST00000621747 MOCS2O96007 188 aaPredicted RBP26.16■■□□□ 1.78
VEGFA-229ENST00000621747 EPHX1P07099 455 aa26.16■■□□□ 1.78
VEGFA-229ENST00000621747 PRKCHP24723 683 aa26.16■■□□□ 1.78
VEGFA-229ENST00000621747 HOXD12P35452 270 aa26.16■■□□□ 1.78
VEGFA-229ENST00000621747 CLCN1P35523 988 aa26.16■■□□□ 1.78
VEGFA-229ENST00000621747 RAPGEF1Q13905 1077 aa26.16■■□□□ 1.78
VEGFA-229ENST00000621747 FNDC3BQ53EP0 1204 aaKnown RBP26.16■■□□□ 1.78
VEGFA-229ENST00000621747 PPM1JQ5JR12 505 aa26.16■■□□□ 1.78
VEGFA-229ENST00000621747 EFHC1Q5JVL4 640 aa26.16■■□□□ 1.78
VEGFA-229ENST00000621747 METTL3Q86U44 580 aaKnown RBP26.16■■□□□ 1.78
VEGFA-229ENST00000621747 SLC47A2Q86VL8 602 aa26.16■■□□□ 1.78
VEGFA-229ENST00000621747 CCDC117Q8IWD4 279 aaPredicted RBP26.16■■□□□ 1.78
VEGFA-229ENST00000621747 FAM71AQ8IYT1 594 aa26.16■■□□□ 1.78
VEGFA-229ENST00000621747 C1orf131Q8NDD1 294 aaKnown RBP26.16■■□□□ 1.78
VEGFA-229ENST00000621747 ENOX1Q8TC92 643 aaKnown RBP26.16■■□□□ 1.78
VEGFA-229ENST00000621747 ASNSD1Q9NWL6 643 aa26.16■■□□□ 1.78
VEGFA-229ENST00000621747 STIM2Q9P246 746 aa26.16■■□□□ 1.78
VEGFA-229ENST00000621747 TJP2Q9UDY2 1190 aa26.16■■□□□ 1.78
VEGFA-229ENST00000621747 CACNA1AO00555 2505 aa26.15■■□□□ 1.78
VEGFA-229ENST00000621747 PATE3B3GLJ2 98 aa26.15■■□□□ 1.78
VEGFA-229ENST00000621747 NDUFS2O75306 463 aa26.15■■□□□ 1.78
VEGFA-229ENST00000621747 ATP5BP06576 529 aaKnown RBP26.15■■□□□ 1.78
VEGFA-229ENST00000621747 PNMA6AP0CW24 399 aaPredicted RBP26.15■■□□□ 1.78
VEGFA-229ENST00000621747 KCNMA1Q12791 1236 aa26.15■■□□□ 1.78
VEGFA-229ENST00000621747 DCAF6Q58WW2 860 aa26.15■■□□□ 1.78
VEGFA-229ENST00000621747 KLHDC7AQ5VTJ3 777 aa26.15■■□□□ 1.78
VEGFA-229ENST00000621747 MBLAC2Q68D91 279 aa26.15■■□□□ 1.78
VEGFA-229ENST00000621747 C11orf57Q6ZUT1 292 aaPredicted RBP26.15■■□□□ 1.78
VEGFA-229ENST00000621747 ADIPOR2Q86V24 386 aa26.15■■□□□ 1.78
VEGFA-229ENST00000621747 TMPRSS6Q8IU80 811 aa26.15■■□□□ 1.78
VEGFA-229ENST00000621747 GPT2Q8TD30 523 aa26.15■■□□□ 1.78
VEGFA-229ENST00000621747 PRICKLE1Q96MT3 831 aaPredicted RBP26.15■■□□□ 1.78
VEGFA-229ENST00000621747 NUSAP1Q9BXS6 441 aaKnown RBP26.15■■□□□ 1.78
VEGFA-229ENST00000621747 MKRN2Q9H000 416 aaKnown RBP26.15■■□□□ 1.78
VEGFA-229ENST00000621747 NUCKS1Q9H1E3 243 aaKnown RBP26.15■■□□□ 1.78
VEGFA-229ENST00000621747 SLC12A6Q9UHW9 1150 aa26.15■■□□□ 1.78
VEGFA-229ENST00000621747 NUP205Q92621 2012 aa26.14■■□□□ 1.78
VEGFA-229ENST00000621747 HSF2BPO75031 334 aa26.14■■□□□ 1.78
VEGFA-229ENST00000621747 IGLV3-25P01717 112 aa26.14■■□□□ 1.78
VEGFA-229ENST00000621747 POLR2EP19388 210 aaKnown RBP26.14■■□□□ 1.78
VEGFA-229ENST00000621747 CDK17Q00537 523 aa26.14■■□□□ 1.78
VEGFA-229ENST00000621747 ZNF33AQ06730 810 aa26.14■■□□□ 1.78
VEGFA-229ENST00000621747 DRAP1Q14919 205 aaPredicted RBP26.14■■□□□ 1.78
VEGFA-229ENST00000621747 TAF5Q15542 800 aa26.14■■□□□ 1.78
VEGFA-229ENST00000621747 ZC3H12AQ5D1E8 599 aaKnown RBP26.14■■□□□ 1.78
VEGFA-229ENST00000621747 TRIM61Q5EBN2 209 aa26.14■■□□□ 1.78
VEGFA-229ENST00000621747 MS4A13Q5J8X5 152 aa26.14■■□□□ 1.78
VEGFA-229ENST00000621747 PEAR1Q5VY43 1037 aaPredicted RBP26.14■■□□□ 1.78
VEGFA-229ENST00000621747 DPY19L2P1Q6NXN4 242 aa26.14■■□□□ 1.78
VEGFA-229ENST00000621747 RBM43Q6ZSC3 357 aaKnown RBP26.14■■□□□ 1.78
VEGFA-229ENST00000621747 DEFB119Q8N690 84 aa26.14■■□□□ 1.78
VEGFA-229ENST00000621747 FIBINQ8TAL6 211 aa26.14■■□□□ 1.78
VEGFA-229ENST00000621747 WFDC5Q8TCV5 224 aa26.14■■□□□ 1.78
VEGFA-229ENST00000621747 CYB5D2Q8WUJ1 264 aa26.14■■□□□ 1.78
VEGFA-229ENST00000621747 PRCCQ92733 491 aaPredicted RBP26.14■■□□□ 1.78
VEGFA-229ENST00000621747 SIPA1Q96FS4 1042 aa26.14■■□□□ 1.78
VEGFA-229ENST00000621747 BTN2A3PQ96KV6 586 aa26.14■■□□□ 1.78
VEGFA-229ENST00000621747 SLC2A13Q96QE2 648 aa26.14■■□□□ 1.78
VEGFA-229ENST00000621747 LSM14BQ9BX40 385 aaKnown RBP26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms