RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 OR6J1Q8NGC5 347 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 PIWIL2Q8TC59 973 aaKnown RBP7.16□□□□□ -1.26
NEDD9-216ENST00000620854 MARK4Q96L34 752 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 DHRS4Q9BTZ2 278 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 MRPL1Q9BYD6 325 aaKnown RBP7.16□□□□□ -1.26
NEDD9-216ENST00000620854 SEMA6AQ9H2E6 1030 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 SNX25Q9H3E2 840 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 KLHL8Q9P2G9 620 aaPredicted RBP7.16□□□□□ -1.26
NEDD9-216ENST00000620854 CROCCQ5TZA2 2017 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 TNRC6CQ9HCJ0 1690 aaKnown RBP7.16□□□□□ -1.26
NEDD9-216ENST00000620854 DYNC1LI2O43237 492 aaPredicted RBP7.16□□□□□ -1.26
NEDD9-216ENST00000620854 FKBP6O75344 327 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 LDHAP00338 332 aaKnown RBP7.16□□□□□ -1.26
NEDD9-216ENST00000620854 HMGCRP04035 888 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 BPGMP07738 259 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 SERPINA6P08185 405 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 ITGA2BP08514 1039 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 PHKA2P46019 1235 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 NUDT2P50583 147 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 YWHAZP63104 245 aaKnown RBP7.16□□□□□ -1.26
NEDD9-216ENST00000620854 TMEM62Q0P6H9 643 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 NADK2Q4G0N4 442 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 UNC5AQ6ZN44 842 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 C10orf107Q8IVU9 208 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 ADGRF2Q8IZF7 708 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 TTC13Q8NBP0 860 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 ATP6V1E2Q96A05 226 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 SSU72Q9NP77 194 aaKnown RBP7.16□□□□□ -1.26
NEDD9-216ENST00000620854 CYP26B1Q9NR63 512 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 RIPK3Q9Y572 518 aa7.16□□□□□ -1.26
NEDD9-216ENST00000620854 C3orf70A6NLC5 250 aaPredicted RBP7.15□□□□□ -1.26
NEDD9-216ENST00000620854 H3BSA7 217 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 STX16-NPEPL1H3BU86 382 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 M0QYV0 167 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 PMM2O15305 246 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 EDN1P05305 212 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 SRGAP2BP0DMP2 458 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 ENO3P13929 434 aaPredicted RBP7.15□□□□□ -1.26
NEDD9-216ENST00000620854 PDGFRAP16234 1089 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 GARTP22102 1010 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 PCSK6P29122 969 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 CPOXP36551 454 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 ALDH1A3P47895 512 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 ESRRGP62508 458 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 POU5F1BQ06416 359 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 TSTA3Q13630 321 aaPredicted RBP7.15□□□□□ -1.26
NEDD9-216ENST00000620854 TFDP2Q14188 446 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 PDPK2PQ6A1A2 396 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 IL31Q6EBC2 164 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 SH2D5Q6ZV89 423 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 RNF168Q8IYW5 571 aaPredicted RBP7.15□□□□□ -1.26
NEDD9-216ENST00000620854 RAET1EQ8TD07 263 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 ITFG2Q969R8 447 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 ERLEC1Q96DZ1 483 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 WNK4Q96J92 1243 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 PIWIL1Q96J94 861 aaKnown RBP7.15□□□□□ -1.26
NEDD9-216ENST00000620854 C2orf40Q9H1Z8 148 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 SMARCAD1Q9H4L7 1026 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 WDR55Q9H6Y2 383 aaPredicted RBP7.15□□□□□ -1.26
NEDD9-216ENST00000620854 PPCSQ9HAB8 311 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 THAP1Q9NVV9 213 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 DDX43Q9NXZ2 648 aaKnown RBP7.15□□□□□ -1.26
NEDD9-216ENST00000620854 UBAP1Q9NZ09 502 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 SH3BP1Q9Y3L3 701 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 ZC3H11AO75152 810 aaKnown RBP eCLIP7.15□□□□□ -1.26
NEDD9-216ENST00000620854 CSPG5O95196 566 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 APOEP02649 317 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 ASLP04424 464 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 PGK2P07205 417 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 FGFR3P22607 806 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 OAZ1P54368 228 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 PHEXP78562 749 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 MAP3K10Q02779 954 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 PPM1LQ5SGD2 360 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 KLHDC10Q6PID8 442 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 ATG14Q6ZNE5 492 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 C15orf39Q6ZRI6 1047 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 CMC1Q7Z7K0 106 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 ZFP28Q8NHY6 868 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 CLEC4DQ8WXI8 215 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 KLRG1Q96E93 195 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 ZNF778Q96MU6 729 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 CDRT15Q96T59 188 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 DHX35Q9H5Z1 703 aaKnown RBP7.15□□□□□ -1.26
NEDD9-216ENST00000620854 UBIAD1Q9Y5Z9 338 aa7.15□□□□□ -1.26
NEDD9-216ENST00000620854 NHSQ6T4R5 1651 aa7.15□□□□□ -1.27
NEDD9-216ENST00000620854 SDR42E2A6NKP2 422 aa7.15□□□□□ -1.27
NEDD9-216ENST00000620854 APOC4-APOC2K7ER74 178 aa7.15□□□□□ -1.27
NEDD9-216ENST00000620854 PDHXO00330 501 aa7.15□□□□□ -1.27
NEDD9-216ENST00000620854 PEX10O60683 326 aa7.15□□□□□ -1.27
NEDD9-216ENST00000620854 ATP6V1G1O75348 118 aa7.15□□□□□ -1.27
NEDD9-216ENST00000620854 APOC2P02655 101 aa7.15□□□□□ -1.27
NEDD9-216ENST00000620854 PABPC4LP0CB38 370 aaKnown RBP7.15□□□□□ -1.27
NEDD9-216ENST00000620854 TBXAS1P24557 533 aaPredicted RBP7.15□□□□□ -1.27
NEDD9-216ENST00000620854 TPP2P29144 1249 aaPredicted RBP7.15□□□□□ -1.27
NEDD9-216ENST00000620854 TYK2P29597 1187 aa7.15□□□□□ -1.27
NEDD9-216ENST00000620854 SLC25A11Q02978 314 aaKnown RBP7.15□□□□□ -1.27
NEDD9-216ENST00000620854 SURF1Q15526 300 aa7.15□□□□□ -1.27
NEDD9-216ENST00000620854 SPOUT1Q5T280 376 aaKnown RBP7.15□□□□□ -1.27
NEDD9-216ENST00000620854 RWDD4Q6NW29 188 aaKnown RBP7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms