RNA–Protein interactions for RNA: ENST00000620465.4

MALAT1-216, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2

Gene MALAT1, Length 333 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-216ENST00000620465 PPFIA1Q13136 1202 aa3.99□□□□□ -1.77
MALAT1-216ENST00000620465 BIRC3Q13489 604 aa3.99□□□□□ -1.77
MALAT1-216ENST00000620465 RAPGEF1Q13905 1077 aa3.99□□□□□ -1.77
MALAT1-216ENST00000620465 SMN1Q16637 294 aaKnown RBP3.99□□□□□ -1.77
MALAT1-216ENST00000620465 GALNTL6Q49A17 601 aa3.99□□□□□ -1.77
MALAT1-216ENST00000620465 AWAT1Q58HT5 328 aa3.99□□□□□ -1.77
MALAT1-216ENST00000620465 KYAT3Q6YP21 454 aaKnown RBP3.99□□□□□ -1.77
MALAT1-216ENST00000620465 ZNF788Q6ZQV5 615 aa3.99□□□□□ -1.77
MALAT1-216ENST00000620465 CPXCR1Q8N123 301 aa3.99□□□□□ -1.77
MALAT1-216ENST00000620465 OR6Y1Q8NGX8 325 aa3.99□□□□□ -1.77
MALAT1-216ENST00000620465 SPPL3Q8TCT6 385 aa3.99□□□□□ -1.77
MALAT1-216ENST00000620465 POLR3GLQ9BT43 218 aa3.99□□□□□ -1.77
MALAT1-216ENST00000620465 ELOVL1Q9BW60 279 aa3.99□□□□□ -1.77
MALAT1-216ENST00000620465 TMLHEQ9NVH6 421 aa3.99□□□□□ -1.77
MALAT1-216ENST00000620465 LUZP4Q9P127 313 aa3.99□□□□□ -1.77
MALAT1-216ENST00000620465 KIF17Q9P2E2 1029 aa3.99□□□□□ -1.77
MALAT1-216ENST00000620465 RAB21Q9UL25 225 aa3.99□□□□□ -1.77
MALAT1-216ENST00000620465 SIRT4Q9Y6E7 314 aaPredicted RBP3.99□□□□□ -1.77
MALAT1-216ENST00000620465 COX11Q9Y6N1 276 aa3.99□□□□□ -1.77
MALAT1-216ENST00000620465 TBC1D3DA0A087WVF3 549 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 TBC1D3IA0A087WXS9 549 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 TBC1D3EA0A087X179 549 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 TBC1D3KA0A087X1G2 549 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 TBC1D3BA6NDS4 549 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 TBC1D3FA6NER0 549 aaPredicted RBP3.98□□□□□ -1.77
MALAT1-216ENST00000620465 MANSC4A6NHS7 340 aaPredicted RBP3.98□□□□□ -1.77
MALAT1-216ENST00000620465 TBC1D3LB9A6J9 549 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 PRYO14603 147 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 FAM155BO75949 473 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 PRKCGP05129 697 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 CYP3A4P08684 503 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 TBC1D3HP0C7X1 549 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 NHLRC4P0CG21 123 aaPredicted RBP3.98□□□□□ -1.77
MALAT1-216ENST00000620465 CYP2D6P10635 497 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 CYP2A6P11509 494 aaPredicted RBP3.98□□□□□ -1.77
MALAT1-216ENST00000620465 HSD3B1P14060 373 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 VPS41P49754 854 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 AGTR2P50052 363 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 FAM3BP58499 235 aaPredicted RBP3.98□□□□□ -1.77
MALAT1-216ENST00000620465 TFF2Q03403 129 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 SLC14A1Q13336 389 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 KPNB1Q14974 876 aaKnown RBP3.98□□□□□ -1.77
MALAT1-216ENST00000620465 TAF5Q15542 800 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 PFKFB3Q16875 520 aaPredicted RBP3.98□□□□□ -1.77
MALAT1-216ENST00000620465 TMEM95Q3KNT9 176 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 TBC1D3GQ6DHY5 549 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 DGAT2L7PQ6IED9 249 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 TBC1D3CQ6IPX1 549 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 RANBP10Q6VN20 620 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 RRAGAQ7L523 313 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 ANKRD18AQ8IVF6 992 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 LAS2Q8IYD9 372 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 C16orf71Q8IYS4 520 aaPredicted RBP3.98□□□□□ -1.77
MALAT1-216ENST00000620465 TBC1D3Q8IZP1 549 aaPredicted RBP3.98□□□□□ -1.77
MALAT1-216ENST00000620465 ADPRHL1Q8NDY3 354 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 SRFBP1Q8NEF9 429 aaKnown RBP3.98□□□□□ -1.77
MALAT1-216ENST00000620465 SEMA6DQ8NFY4 1073 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 SLC2A12Q8TD20 617 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 ASB12Q8WXK4 309 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 GOLGA1Q92805 767 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 GCC1Q96CN9 775 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 TRMT61AQ96FX7 289 aaKnown RBP3.98□□□□□ -1.77
MALAT1-216ENST00000620465 SENP7Q9BQF6 1050 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 NUAK2Q9H093 628 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 SLITRK6Q9H5Y7 841 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 G6PC2Q9NQR9 355 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 ARL8BQ9NVJ2 186 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 ASNSD1Q9NWL6 643 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 C11orf21Q9P2W6 132 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 BAG5Q9UL15 447 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 GPR52Q9Y2T5 361 aa3.98□□□□□ -1.77
MALAT1-216ENST00000620465 PRRT4C9JH25 899 aa3.97□□□□□ -1.77
MALAT1-216ENST00000620465 TFRCP02786 760 aaKnown RBP3.97□□□□□ -1.77
MALAT1-216ENST00000620465 TK1P04183 234 aa3.97□□□□□ -1.77
MALAT1-216ENST00000620465 IGFBP2P18065 325 aa3.97□□□□□ -1.77
MALAT1-216ENST00000620465 HOXD12P35452 270 aa3.97□□□□□ -1.77
MALAT1-216ENST00000620465 STAT6P42226 847 aa3.97□□□□□ -1.77
MALAT1-216ENST00000620465 GAB1Q13480 694 aa3.97□□□□□ -1.77
MALAT1-216ENST00000620465 SMAD1Q15797 465 aaKnown RBP3.97□□□□□ -1.77
MALAT1-216ENST00000620465 GLE1Q53GS7 698 aaKnown RBP3.97□□□□□ -1.77
MALAT1-216ENST00000620465 ANKRD45Q5TZF3 282 aa3.97□□□□□ -1.77
MALAT1-216ENST00000620465 MOGAT3Q86VF5 341 aa3.97□□□□□ -1.77
MALAT1-216ENST00000620465 ZNF354CQ86Y25 554 aa3.97□□□□□ -1.77
MALAT1-216ENST00000620465 C2CD5Q86YS7 1000 aa3.97□□□□□ -1.77
MALAT1-216ENST00000620465 PNISRQ8TF01 805 aaKnown RBP3.97□□□□□ -1.77
MALAT1-216ENST00000620465 PPM1EQ8WY54 764 aa3.97□□□□□ -1.77
MALAT1-216ENST00000620465 SDCCAG3Q96C92 435 aa3.97□□□□□ -1.77
MALAT1-216ENST00000620465 ZNF764Q96H86 408 aaPredicted RBP3.97□□□□□ -1.77
MALAT1-216ENST00000620465 ZNF845Q96IR2 970 aaPredicted RBP3.97□□□□□ -1.77
MALAT1-216ENST00000620465 ZSCAN31Q96LW9 406 aaPredicted RBP3.97□□□□□ -1.77
MALAT1-216ENST00000620465 EFHD1Q9BUP0 239 aa3.97□□□□□ -1.77
MALAT1-216ENST00000620465 HTATIP2Q9BUP3 242 aa3.97□□□□□ -1.77
MALAT1-216ENST00000620465 TRIM2Q9C040 744 aa3.97□□□□□ -1.77
MALAT1-216ENST00000620465 TWSG1Q9GZX9 223 aa3.97□□□□□ -1.77
MALAT1-216ENST00000620465 PRDM16Q9HAZ2 1276 aa3.97□□□□□ -1.77
MALAT1-216ENST00000620465 ITM2CQ9NQX7 267 aa3.97□□□□□ -1.77
MALAT1-216ENST00000620465 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.97□□□□□ -1.77
MALAT1-216ENST00000620465 SLC12A4Q9UP95 1085 aa3.97□□□□□ -1.77
MALAT1-216ENST00000620465 LZTS1Q9Y250 596 aa3.97□□□□□ -1.77
MALAT1-216ENST00000620465 SMARCA4P51532 1647 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms