RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 WEE1P30291 646 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 PTPN7P35236 360 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 LTBRP36941 435 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 CDKN2BP42772 138 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 PAFAH1B1P43034 410 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 HCAR3P49019 387 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 HARS2P49590 506 aaKnown RBP8.31□□□□□ -1.08
CPNE3-209ENST00000620393 KCNQ1P51787 676 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 CDH6P55285 790 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 NRG1Q02297 640 aaPredicted RBP8.31□□□□□ -1.08
CPNE3-209ENST00000620393 DLX2Q07687 328 aaPredicted RBP8.31□□□□□ -1.08
CPNE3-209ENST00000620393 DPYSL3Q14195 570 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 KRT81Q14533 505 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 CLUL1Q15846 466 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 PPP2R5EQ16537 467 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 WHAMMP3Q1A5X7 153 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 STXBP5Q5T5C0 1151 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 SEL1L2Q5TEA6 688 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 CES5AQ6NT32 575 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 AADACL2Q6P093 401 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 ANKS1BQ7Z6G8 1248 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 SLC13A5Q86YT5 568 aaPredicted RBP8.31□□□□□ -1.08
CPNE3-209ENST00000620393 CMTM8Q8IZV2 173 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 PYROXD2Q8N2H3 581 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 ITFG1Q8TB96 612 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 ACTRT1Q8TDG2 376 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 TSC1Q92574 1164 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 PLD4Q96BZ4 506 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 ACSF2Q96CM8 615 aaPredicted RBP8.31□□□□□ -1.08
CPNE3-209ENST00000620393 MS4A14Q96JA4 679 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 MSLNLQ96KJ4 702 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 ZFRQ96KR1 1074 aaKnown RBP8.31□□□□□ -1.08
CPNE3-209ENST00000620393 BTN2A3PQ96KV6 586 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 ZSWIM3Q96MP5 696 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 RNF157Q96PX1 679 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 KCTD15Q96SI1 283 aaPredicted RBP8.31□□□□□ -1.08
CPNE3-209ENST00000620393 APOL5Q9BWW9 433 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 MAK16Q9BXY0 300 aaKnown RBP8.31□□□□□ -1.08
CPNE3-209ENST00000620393 OSBPL8Q9BZF1 889 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 DCLK3Q9C098 648 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 L2HGDHQ9H9P8 463 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 PRDM16Q9HAZ2 1276 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 TMPRSS4Q9NRS4 437 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 KLHL11Q9NVR0 708 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 CLDND1Q9NY35 253 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 RCOR3Q9P2K3 495 aaPredicted RBP8.31□□□□□ -1.08
CPNE3-209ENST00000620393 OR12D3Q9UGF7 316 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 ARHGAP26Q9UNA1 814 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 AP4E1Q9UPM8 1137 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 MRFAP1Q9Y605 127 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 CPQQ9Y646 472 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 PTPRDP23468 1912 aa8.31□□□□□ -1.08
CPNE3-209ENST00000620393 hCG_1818297A0A087WSY0 165 aa8.3□□□□□ -1.08
CPNE3-209ENST00000620393 FAM72CH0Y354 149 aa8.3□□□□□ -1.08
CPNE3-209ENST00000620393 H3BRJ5 948 aa8.3□□□□□ -1.08
CPNE3-209ENST00000620393 PDE2AO00408 941 aaPredicted RBP8.3□□□□□ -1.08
CPNE3-209ENST00000620393 ACSL4O60488 711 aa8.3□□□□□ -1.08
CPNE3-209ENST00000620393 GREM1O60565 184 aa8.3□□□□□ -1.08
CPNE3-209ENST00000620393 TJP3O95049 919 aa8.3□□□□□ -1.08
CPNE3-209ENST00000620393 MOCS2O96007 188 aaPredicted RBP8.3□□□□□ -1.08
CPNE3-209ENST00000620393 KLKB1P03952 638 aa8.3□□□□□ -1.08
CPNE3-209ENST00000620393 CKMP06732 381 aa8.3□□□□□ -1.08
CPNE3-209ENST00000620393 KRT10P13645 584 aa8.3□□□□□ -1.08
CPNE3-209ENST00000620393 CEBPBP17676 345 aa8.3□□□□□ -1.08
CPNE3-209ENST00000620393 FSHRP23945 695 aa8.3□□□□□ -1.08
CPNE3-209ENST00000620393 HTR7P34969 479 aa8.3□□□□□ -1.08
CPNE3-209ENST00000620393 AVPR1AP37288 418 aa8.3□□□□□ -1.08
CPNE3-209ENST00000620393 ARL4AP40617 200 aa8.3□□□□□ -1.08
CPNE3-209ENST00000620393 SLC11A2P49281 568 aa8.3□□□□□ -1.08
CPNE3-209ENST00000620393 ZXDBP98169 803 aa8.3□□□□□ -1.08
CPNE3-209ENST00000620393 SEMA3BQ13214 749 aa8.3□□□□□ -1.08
CPNE3-209ENST00000620393 AUHQ13825 339 aaKnown RBP8.3□□□□□ -1.08
CPNE3-209ENST00000620393 TFDP2Q14188 446 aa8.3□□□□□ -1.08
CPNE3-209ENST00000620393 CBX2Q14781 532 aaPredicted RBP8.3□□□□□ -1.08
CPNE3-209ENST00000620393 LLGL1Q15334 1064 aa8.3□□□□□ -1.08
CPNE3-209ENST00000620393 LONRF2Q1L5Z9 754 aa8.3□□□□□ -1.08
CPNE3-209ENST00000620393 ANKRD20A8PQ5CZ79 823 aa8.3□□□□□ -1.08
CPNE3-209ENST00000620393 TFDP3Q5H9I0 405 aa8.3□□□□□ -1.08
CPNE3-209ENST00000620393 PPP6R3Q5H9R7 873 aaPredicted RBP8.3□□□□□ -1.08
CPNE3-209ENST00000620393 HABP4Q5JVS0 413 aaKnown RBP8.3□□□□□ -1.08
CPNE3-209ENST00000620393 CCDC181Q5TID7 509 aa8.3□□□□□ -1.08
CPNE3-209ENST00000620393 FAM72AQ5TYM5 149 aa8.3□□□□□ -1.08
CPNE3-209ENST00000620393 FAM72DQ6L9T8 149 aa8.3□□□□□ -1.08
CPNE3-209ENST00000620393 HTR3DQ70Z44 454 aa8.3□□□□□ -1.08
CPNE3-209ENST00000620393 C14orf80Q86SX3 495 aa8.3□□□□□ -1.08
CPNE3-209ENST00000620393 FAM72BQ86X60 149 aa8.3□□□□□ -1.08
CPNE3-209ENST00000620393 CCDC50Q8IVM0 306 aa8.3□□□□□ -1.08
CPNE3-209ENST00000620393 ARID3BQ8IVW6 561 aaPredicted RBP8.3□□□□□ -1.08
CPNE3-209ENST00000620393 ADAMTS19Q8TE59 1207 aa8.3□□□□□ -1.08
CPNE3-209ENST00000620393 MAIP1Q8WWC4 291 aa8.3□□□□□ -1.08
CPNE3-209ENST00000620393 WBP2Q969T9 261 aa8.3□□□□□ -1.08
CPNE3-209ENST00000620393 FAF2Q96CS3 445 aa8.3□□□□□ -1.08
CPNE3-209ENST00000620393 CAPZA3Q96KX2 299 aa8.3□□□□□ -1.08
CPNE3-209ENST00000620393 RIPOR3Q96MK2 946 aa8.3□□□□□ -1.08
CPNE3-209ENST00000620393 CSPG4P5Q96PW8 444 aa8.3□□□□□ -1.08
CPNE3-209ENST00000620393 NAP1L3Q99457 506 aaPredicted RBP8.3□□□□□ -1.08
CPNE3-209ENST00000620393 CDX2Q99626 313 aaPredicted RBP8.3□□□□□ -1.08
CPNE3-209ENST00000620393 PRMT1Q99873 361 aaKnown RBP8.3□□□□□ -1.08
CPNE3-209ENST00000620393 ZNF670Q9BS34 389 aa8.3□□□□□ -1.08
CPNE3-209ENST00000620393 HEMGNQ9BXL5 484 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms