RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 CHI3L2Q15782 390 aa7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 SMTNL2Q2TAL5 461 aa7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 ZNF699Q32M78 642 aa7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 MMEL1Q495T6 779 aa7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 RNASEH2BQ5TBB1 312 aaKnown RBP7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 TTC39BQ5VTQ0 682 aaPredicted RBP7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 MON1BQ7L1V2 547 aa7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 ZFAND2BQ8WV99 257 aa7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 HSPH1Q92598 858 aa7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 HERPUD2Q9BSE4 406 aa7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 FRMD8P1Q9BZ68 369 aaPredicted RBP7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 PTPRHQ9HD43 1115 aa7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 DMAP1Q9NPF5 467 aaPredicted RBP7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 TAS2R1Q9NYW7 299 aa7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 PCSK1NQ9UHG2 260 aa7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 CENPFP49454 3210 aa7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 FAM237BA0A1B0GVD1 139 aa7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 MBLAC1A4D2B0 266 aaPredicted RBP7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 HAS3O00219 553 aa7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 TYROBPO43914 113 aa7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 ANPEPP15144 967 aa7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 MZF1P28698 734 aaPredicted RBP7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 THPOP40225 353 aa7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 NOMO3P69849 1222 aa7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 SNX17Q15036 470 aa7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 FAM187BQ17R55 369 aa7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 WDR72Q3MJ13 1102 aa7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 LRRC38Q5VT99 294 aa7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 CASC4Q6P4E1 433 aa7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 RINLQ6ZS11 566 aa7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 NET1Q7Z628 596 aaPredicted RBP7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 RGL4Q8IZJ4 473 aa7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 FAM71DQ8N9W8 422 aa7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 RNF169Q8NCN4 708 aa7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 PIP4K2CQ8TBX8 421 aa7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 GLT1D1Q96MS3 346 aa7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 DDX50Q9BQ39 737 aaKnown RBP7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 ADAMTS10Q9H324 1103 aa7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 C12orf65Q9H3J6 166 aaKnown RBP7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 KCNK4Q9NYG8 393 aa7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 UMODL1Q5DID0 1318 aa7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 TGDSO95455 350 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 ITGB3P05106 788 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 INHAP05111 366 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 NFICP08651 508 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 RBP3P10745 1247 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 AQP5P55064 265 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 RACK1P63244 317 aaKnown RBP7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 STX3Q13277 289 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 TMEM132DQ14C87 1099 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 ZNF667Q5HYK9 610 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 GLRA4Q5JXX5 417 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 RABGAP1LQ5R372 815 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 JADE1Q6IE81 842 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 GDF6Q6KF10 455 aaPredicted RBP7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 SLC27A1Q6PCB7 646 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 DRICH1Q6PGQ1 229 aaPredicted RBP7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 ADGRD1Q6QNK2 874 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 RIPOR1Q6ZS17 1223 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 ICA1LQ8NDH6 482 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 DDX1Q92499 740 aaKnown RBP7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 KCNN1Q92952 543 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 HIC2Q96JB3 615 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 MIPEPQ99797 713 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 NMUR2Q9GZQ4 415 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 SAP130Q9H0E3 1048 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 CYP4F11Q9HBI6 524 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 KLK14Q9P0G3 267 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 NUB1Q9Y5A7 615 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 hCG_1818297A0A087WSY0 165 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 F8VP50 259 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 F8W8V4 182 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 GPR32O75388 356 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 VNN1O95497 513 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 LYNP07948 512 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 KRT3P12035 628 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 PROZP22891 400 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 AKAP5P24588 427 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 GRK4P32298 578 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 ELK3P41970 407 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 TUBP50607 506 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 CRYBB1P53674 252 aaPredicted RBP7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 TBX4P57082 545 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 RPL7AP62424 266 aaKnown RBP7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 FAAP100Q0VG06 881 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 ORC1Q13415 861 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 TFDP2Q14188 446 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 TRIP10Q15642 601 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 KYAT1Q16773 422 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 DCAF4L1Q3SXM0 396 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 PLEKHA7Q6IQ23 1121 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 SLC26A11Q86WA9 606 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 PHF13Q86YI8 300 aaPredicted RBP7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 CCNJLQ8IV13 435 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 MAP7D3Q8IWC1 876 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 SLC25A41Q8N5S1 370 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 ANKLE1Q8NAG6 615 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 GLIS1Q8NBF1 620 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 KLC2Q9H0B6 622 aa7.2□□□□□ -1.26
SRGAP3-213ENST00000618999 PIDD1Q9HB75 910 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms