RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 PLAC1Q9HBJ0 212 aa16.22■□□□□ 0.19
NR1H3-235ENST00000616973 TRMT13Q9NUP7 481 aaKnown RBP16.22■□□□□ 0.19
NR1H3-235ENST00000616973 PRKAG3Q9UGI9 489 aa16.22■□□□□ 0.19
NR1H3-235ENST00000616973 ARL2BPQ9Y2Y0 163 aa16.22■□□□□ 0.19
NR1H3-235ENST00000616973 NCAM2O15394 837 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 MYCNP04198 464 aaPredicted RBP16.21■□□□□ 0.19
NR1H3-235ENST00000616973 ACLYP53396 1101 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 SLC18A2Q05940 514 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 NOGQ13253 232 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 PARP6Q2NL67 630 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 HHATQ5VTY9 493 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 TRPM8Q7Z2W7 1104 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 COLGALT1Q8NBJ5 622 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 COLEC11Q9BWP8 271 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 BRD8Q9H0E9 1235 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 DDIT4Q9NX09 232 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 MYO16Q9Y6X6 1858 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 RNF103O00237 685 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 DNM1LO00429 736 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 EOMESO95936 686 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 MT-ND3P03897 115 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 GSTA1P08263 222 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 TPI1P60174 286 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 AP1B1Q10567 949 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 FAM182AQ5T1J6 154 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 TTC39BQ5VTQ0 682 aaPredicted RBP16.21■□□□□ 0.19
NR1H3-235ENST00000616973 OVOS1Q6IE37 1185 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 CGB2Q6NT52 195 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 UNC5AQ6ZN44 842 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 DENND5BQ6ZUT9 1274 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 SH2D5Q6ZV89 423 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 PRPF39Q86UA1 669 aaKnown RBP16.21■□□□□ 0.19
NR1H3-235ENST00000616973 LRRC6Q86X45 466 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 REM2Q8IYK8 340 aaPredicted RBP16.21■□□□□ 0.19
NR1H3-235ENST00000616973 CCDC33Q8N5R6 958 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 GSDMBQ8TAX9 411 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 PAIP2Q9BPZ3 127 aaKnown RBP16.21■□□□□ 0.19
NR1H3-235ENST00000616973 RHOBTB2Q9BYZ6 727 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 PITPNM3Q9BZ71 974 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 PRDM12Q9H4Q4 367 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 RGS18Q9NS28 235 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.21■□□□□ 0.19
NR1H3-235ENST00000616973 IGSF9Q9P2J2 1179 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 SRRDQ9UH36 339 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 GRID1Q9ULK0 1009 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 INPP5FQ9Y2H2 1132 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 STARD13Q9Y3M8 1113 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 PCDHA11Q9Y5I1 949 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 CAPN7Q9Y6W3 813 aa16.21■□□□□ 0.19
NR1H3-235ENST00000616973 FAM72CH0Y354 149 aa16.2■□□□□ 0.18
NR1H3-235ENST00000616973 I6L893 689 aaPredicted RBP16.2■□□□□ 0.18
NR1H3-235ENST00000616973 PIAS1O75925 651 aa16.2■□□□□ 0.18
NR1H3-235ENST00000616973 ERCC2P18074 760 aa16.2■□□□□ 0.18
NR1H3-235ENST00000616973 BDNFP23560 247 aa16.2■□□□□ 0.18
NR1H3-235ENST00000616973 WASHC5Q12768 1159 aa16.2■□□□□ 0.18
NR1H3-235ENST00000616973 FAM72AQ5TYM5 149 aa16.2■□□□□ 0.18
NR1H3-235ENST00000616973 STEAP4Q687X5 459 aa16.2■□□□□ 0.18
NR1H3-235ENST00000616973 FAM72DQ6L9T8 149 aa16.2■□□□□ 0.18
NR1H3-235ENST00000616973 LRRC8BQ6P9F7 803 aa16.2■□□□□ 0.18
NR1H3-235ENST00000616973 LVRNQ6Q4G3 990 aa16.2■□□□□ 0.18
NR1H3-235ENST00000616973 PAXIP1Q6ZW49 1069 aaPredicted RBP16.2■□□□□ 0.18
NR1H3-235ENST00000616973 FAM72BQ86X60 149 aa16.2■□□□□ 0.18
NR1H3-235ENST00000616973 SMC1BQ8NDV3 1235 aa16.2■□□□□ 0.18
NR1H3-235ENST00000616973 OR10T2Q8NGX3 314 aa16.2■□□□□ 0.18
NR1H3-235ENST00000616973 ADAM32Q8TC27 787 aa16.2■□□□□ 0.18
NR1H3-235ENST00000616973 WDCPQ9H6R7 721 aa16.2■□□□□ 0.18
NR1H3-235ENST00000616973 ANLNQ9NQW6 1124 aa16.2■□□□□ 0.18
NR1H3-235ENST00000616973 TMLHEQ9NVH6 421 aa16.2■□□□□ 0.18
NR1H3-235ENST00000616973 PCDHB8Q9UN66 801 aa16.2■□□□□ 0.18
NR1H3-235ENST00000616973 SHROOM3Q8TF72 1996 aa16.2■□□□□ 0.18
NR1H3-235ENST00000616973 MOXD2PA6NHM9 499 aa16.19■□□□□ 0.18
NR1H3-235ENST00000616973 FAM159BA6NKW6 160 aa16.19■□□□□ 0.18
NR1H3-235ENST00000616973 CKBP12277 381 aa16.19■□□□□ 0.18
NR1H3-235ENST00000616973 ALADP13716 330 aa16.19■□□□□ 0.18
NR1H3-235ENST00000616973 SCTRP47872 440 aa16.19■□□□□ 0.18
NR1H3-235ENST00000616973 TSPY1Q01534 308 aa16.19■□□□□ 0.18
NR1H3-235ENST00000616973 FAAP100Q0VG06 881 aa16.19■□□□□ 0.18
NR1H3-235ENST00000616973 ZKSCAN8Q15776 578 aaPredicted RBP16.19■□□□□ 0.18
NR1H3-235ENST00000616973 SPRED3Q2MJR0 410 aa16.19■□□□□ 0.18
NR1H3-235ENST00000616973 PAN2Q504Q3 1202 aaKnown RBP16.19■□□□□ 0.18
NR1H3-235ENST00000616973 LGSNQ5TDP6 509 aa16.19■□□□□ 0.18
NR1H3-235ENST00000616973 BSPRYQ5W0U4 402 aa16.19■□□□□ 0.18
NR1H3-235ENST00000616973 RNF43Q68DV7 783 aa16.19■□□□□ 0.18
NR1H3-235ENST00000616973 LRRTM3Q86VH5 581 aa16.19■□□□□ 0.18
NR1H3-235ENST00000616973 CCNJLQ8IV13 435 aa16.19■□□□□ 0.18
NR1H3-235ENST00000616973 LRRC8CQ8TDW0 803 aa16.19■□□□□ 0.18
NR1H3-235ENST00000616973 TSEN34Q9BSV6 310 aaKnown RBP16.19■□□□□ 0.18
NR1H3-235ENST00000616973 VPS11Q9H270 941 aa16.19■□□□□ 0.18
NR1H3-235ENST00000616973 KRT37O76014 449 aa16.19■□□□□ 0.18
NR1H3-235ENST00000616973 IGLV3-25P01717 112 aa16.19■□□□□ 0.18
NR1H3-235ENST00000616973 SNRPAP09012 282 aaKnown RBP16.19■□□□□ 0.18
NR1H3-235ENST00000616973 HOXD10P28358 340 aa16.19■□□□□ 0.18
NR1H3-235ENST00000616973 CYP2C18P33260 490 aa16.19■□□□□ 0.18
NR1H3-235ENST00000616973 NEK3P51956 506 aa16.19■□□□□ 0.18
NR1H3-235ENST00000616973 PPIDQ08752 370 aaKnown RBP16.19■□□□□ 0.18
NR1H3-235ENST00000616973 TRAF7Q6Q0C0 670 aa16.19■□□□□ 0.18
NR1H3-235ENST00000616973 ZNF567Q8N184 647 aa16.19■□□□□ 0.18
NR1H3-235ENST00000616973 PPM1NQ8N819 430 aa16.19■□□□□ 0.18
NR1H3-235ENST00000616973 CCNYQ8ND76 341 aa16.19■□□□□ 0.18
NR1H3-235ENST00000616973 TCP10LQ8TDR4 215 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms